Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07247
Subject:
XM_006529847.3
Aligned Length:
3567
Identities:
1898
Gaps:
1479

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTGTGAGGTGATGCCCACAATCAATGAGGGGGACCCCCTGGGGCCCCCCCACGGTGCCGATGCTGAGGCCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTTTGAGCAGCTGATGGTGAACATGCTGGATGAGCGAGAGAAGTTGCTGGAGTCCCTTCGGGAGAGTCAGGAAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTTTGGTAGCCACACAGAGCCGGCTCCAGGATGCCCTTCACGAGCGAGATCAGCTCCAGCGCCACCTGAACTCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCCTTCCCCAGGAATTTGCCACTTTAACTCGGGAGCTAAGCATGTGTCGGGAGCAGCTTCTGGAGCGGGAGGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGAGATATCTGAGCTGAAAGCAGAGCGGAATAACACAAGGCTGCTTCTGGAACATCTGGAATGCCTCGTGTCCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCCATGAGCGGTCATTGCGGATGACAGTGGTAAAACGGCAGGCCCAATCACCTTCAGGTGTCTCCAGTGAGGTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAGGTGCTGAAGGCCCTCAAGTCACTATTTGAGCACCACAAGGCCCTGGATGAGAAGGTGCGAGAGCGGCTCCG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGCAGCTCTAGAGCGCGTTACTACCTTGGAGGAGCAGTTGGCAGGAGCTCACCAGCAGGTATCTGCCCTGCAGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGGGTGCAGGAATTCGGGATGGAGTAGCAGAAGAGGAAGGGACTGTGGATCTGGGACCAAAACGCCTGTGGAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GATGACACTGGCCGCGTGGAAGAGCTGCAAGGACTCTTGGAGAAGCAAAACTATGAGTTGAGCCAGGCCCGTGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GCGGCTGGTCACCCTGAGTGCCACCGTGACTGAGCTGGAGGAGGACCTGGGCACGGCCCGCCGAGACCTCATCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGTCAGAGGAGCTGAGCAGCAAGCATCAGCGGGACCTCCGAGAGGCTCTGGCTCAGAAGGAGGACATGGAAGAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGAATCACCACACTGGAGAAGCGCTACTTGGCTGCTCAGCGAGAAGCCACATCCATCCATGACCTCAATGACAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACTGGAGAATGAGCTGGCCAACAAGGAATCCCTGCACCGCCAGTGTGAGGAGAAAGCCCGGCATCTGCAGGAGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGCTAGAAGTAGCAGAGCAGAAGTTGCAGCAGACCATGCGCAAGGCAGAGACTCTGCCCGAGGTGGAGGCTGAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTGTCTCAGAGAATCGCAGCCCTCACCAAGGCTGAGGAACGTCATGGCAACATTGAGGAACATCTGCGGCAGCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGAAGGGCAGCTGGAAGAGAAGAACCAGGAGCTGGCAAGGGTGCGCCAGCGGGAGAAGATGAATGAAGACCACA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACAAGCGGCTGTCAGACACCGTGGACCGGTTGCTTAGTGAGTCCAACGAACGCCTGCAGCTCCACCTCAAGGAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CGAATGGCTGCCCTGGAGGAGAAGGGCCGTCTGTCTGAAGAGATTGAGAAGCTGCGCCAAGAGGTGGACCAGCT  1406

Query    1  -------------------------------------------------ATGGGCAGTGCAGCAGACGTGCGGT  25
                                                             .|||||||.||||||||.|||.|||
Sbjct 1407  GAAGGGTCGAGGGGGGCCGTTTGTGGATGGCATCCACTCCAGGTCACACGTGGGCAGCGCAGCAGATGTGAGGT  1480

Query   26  TCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCTGCC  99
            ||||.|||.|.|||.||||||||||.||||||||..|||||||.|||||.|||||..|||||||.||.||||||
Sbjct 1481  TCTCACTGAGTACAGCCACACACGCGCCCCCAGGTCTGCATCGACGCTATTCGGCGCTGAGGGATGAATCTGCC  1554

Query  100  AAGGACTGGGAGACTTCTCCACTGCCTGGGATGCTGG------CCCCGGCAGCTGGCCCTGCCTTTGACAGTGA  167
            |||||||||.||.|.||.||||||||.|||.||.|||      ||.||         |||||||||||||||||
Sbjct 1555  AAGGACTGGAAGCCATCGCCACTGCCAGGGGTGTTGGGCGCCACCACG---------CCTGCCTTTGACAGTGA  1619

Query  168  CCCTGAGATCTCCGACGTGGATGAGGATGAGCCAGGGGGTCTGGTGGGCTCT---GCGGATGTTGTCTCCCCCA  238
            ||||||||||||.||.|||||||||||||||||.|||||..||||||||.||   |..|||||..||||.|||.
Sbjct 1620  CCCTGAGATCTCTGATGTGGATGAGGATGAGCCTGGGGGCTTGGTGGGCACTCAGGTCGATGTCATCTCACCCG  1693

Query  239  GCGGCCACTCAGATGCCCAGACCCTGGCCATGATGCTGCAGGAGCAGCTGGATGCCATCAATGAGGAAATCAGG  312
            |.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||..||||.||||||
Sbjct 1694  GTGGCCATTCAGATGCCCAGACCCTGGCCATGATGCTACAGGAGCAGCTGGATGCCATCAACCAGGAGATCAGG  1767

Query  313  ATGATTCAGGAAGAGAAGGAGTCCACGGAGCTCCGCGCGGAGGAGATTGAGACGCGTGTAACCAGTGGCAGCAT  386
            |||||.|||||.||||||||||||||.|||||.||.||.||||||||||||||.|||||.|||||.||||||||
Sbjct 1768  ATGATCCAGGAGGAGAAGGAGTCCACTGAGCTTCGAGCTGAGGAGATTGAGACCCGTGTGACCAGCGGCAGCAT  1841

Query  387  GGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGTCCCTGGCCA  460
            |||.|||||.|||||||..|||||||||||||||||.||.|||||||||||||||||.|||||.||||||||||
Sbjct 1842  GGAGGCCCTCAACCTGACCCAGCTGCGCAAGCGTGGCTCTATCCCCACCTCTCTGACCGCCCTTTCCCTGGCCA  1915

Query  461  GCGCGTCCCCACCACTCAGCGGCCGCTCCACACCTAAGCTCACCTCCCGCAGTGCTGCCCAGGACCTGGACCGA  534
            |.||.||.|||||.|||||.||||||||||||||.||||||||.|||||.||||||||||||||.|||||||||
Sbjct 1916  GTGCATCTCCACCGCTCAGTGGCCGCTCCACACCCAAGCTCACTTCCCGAAGTGCTGCCCAGGATCTGGACCGA  1989

Query  535  ATGGGGGTCATGACCCTGCCCAGTGACTTAAGAAAGCATAGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGA  608
            |||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1990  ATGGGGGTCATGACCCTGCCCAGCGACTTAAGAAAGCATAGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGA  2063

Query  609  GAACCGAGAGGATAAAGCCACCATAAAATGTGAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAGAGA  682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2064  GAACCGAGAGGATAAAGCCACCATAAAATGTGAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAGAGA  2137

Query  683  AGCTTGGCCACCCAGCCCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGGATCAGGGCAGCAACCCCAGCAGC  756
            |||||||||||||.|.||||||.||.||.||.|||||||||||||||||||.|||||.||||||||||||||||
Sbjct 2138  AGCTTGGCCACCCTGGCCTGAGTCAAGAGGAGGGCAAGAGTGCCTTGGAGGGTCAGGACAGCAACCCCAGCAGC  2211

Query  757  AGCAACAGCAGCCAGGACTCCCTGCACAAGGGCGCCAAGCGAAAGGGCATCAAGTCGTCCATTGGCCGCCTGTT  830
            |||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||
Sbjct 2212  AGCAACAGCAGCCAGGACTCCCTGCACAAGGGCGCCAAGCGCAAGGGCATCAAGTCATCCATTGGCCGCCTGTT  2285

Query  831  TGGGAAGAAGGAGAAGGGCAGGCTGATCCAGCTGAGTCGGGATGGAGCCACAGGCCATGTTCTGCTAACAGACT  904
            |||||||||||||||||||||||||||||||||||||||||||   |||||.||||||||||||||.|||||||
Sbjct 2286  TGGGAAGAAGGAGAAGGGCAGGCTGATCCAGCTGAGTCGGGAT---GCCACGGGCCATGTTCTGCTCACAGACT  2356

Query  905  CCGAATTCAGTATGCAGGAGCCTATGGTGCCTGCCAAGCTGGGGACCCAGGCAGAGAAGGACCGGCGGCTAAAG  978
            ||||..|||||.|||||||.||.|||||.|||||.|||.||||||||||||||||||||||||||||.||.||.
Sbjct 2357  CCGAGCTCAGTCTGCAGGAACCAATGGTACCTGCTAAGTTGGGGACCCAGGCAGAGAAGGACCGGCGACTGAAA  2430

Query  979  AAGAAACACCAGCTGCTTGAAGATGCCAGCAGGAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTACTGTGGT  1052
            ||||||||||||||||||||||||||..||.|.||||||||||||||||||||.||||||||.||.||.|||||
Sbjct 2431  AAGAAACACCAGCTGCTTGAAGATGCGCGCCGAAAAGGAATGCCCTTTGCCCAATGGGATGGCCCCACGGTGGT  2504

Query 1053  CTCCTGGTTGGAGCTCTGGGTGGGGATGCCTGCCTGGTATGTGGCAGCCTGCCGGGCCAACGTCAAGAGTGGTG  1126
            |||||||.|||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|
Sbjct 2505  CTCCTGGCTGGAGCTCTGGGTGGGGATGCCTGCCTGGTATGTGGCGGCCTGCCGGGCCAATGTCAAGAGTGGCG  2578

Query 1127  CCATCATGTCCGCTCTGTCGGACACAGAGATCCAGCGGGAGATCGGCATCAGCAATGCCCTGCACCGGCTCAAG  1200
            |||||||||||||..||||||||||.|||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 2579  CCATCATGTCCGCCTTGTCGGACACGGAGATCCAGCGGGAGATCGGCATCAGCAATGCCCTGCACAGGCTCAAG  2652

Query 1201  CTCCGCCTGGCCATTCAGGAGATGGTGTCATTGACCAGCCCCTCTGCCCCACCCACCTCCAGGACTTCTTCTGG  1274
            ||||||||||||||.|||||||||||||||.||||.||||||||.||.|||||.|||||||||||||||||.||
Sbjct 2653  CTCCGCCTGGCCATCCAGGAGATGGTGTCACTGACGAGCCCCTCAGCTCCACCTACCTCCAGGACTTCTTCAGG  2726

Query 1275  GAATGTCTGGGTCACCCATGAAGAGATGGAAACTCTGGAAACATCTACTAAAACAGACAGTGAGGAGGGCAGCT  1348
            ||||||||||||.|||||.|||||||||||||||||||.|||||||||.|||||||||||||||||||||||||
Sbjct 2727  GAATGTCTGGGTGACCCACGAAGAGATGGAAACTCTGGCAACATCTACCAAAACAGACAGTGAGGAGGGCAGCT  2800

Query 1349  GGGCTCAGACCCTGGCCTATGGGGACATGAACCATGAGTGGATTGGGAATGAATGGCTACCCAGCCTGGGGCTC  1422
            ||||.|||||||||||||||||.||||||||.||.|||||||||||.||.||||||||.|||||||||||||||
Sbjct 2801  GGGCCCAGACCCTGGCCTATGGAGACATGAATCACGAGTGGATTGGAAACGAATGGCTGCCCAGCCTGGGGCTC  2874

Query 1423  CCGCAGTACCGCAGCTACTTCATGGAGTGCCTGGTGGACGCCCGCATGCTGGACCACCTCACCAAGAAGGACCT  1496
            ||.||||||||.||.|||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||
Sbjct 2875  CCTCAGTACCGTAGTTACTTCATGGAGTGCCTGGTGGATGCCCGCATGCTGGATCACCTCACCAAGAAGGACCT  2948

Query 1497  GCGGGTCCACCTGAAGATGGTGGACAGCTTCCATCGAACCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGC  1570
            |||.|||||.||.||||||||||||||.||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 2949  GCGTGTCCATCTCAAGATGGTGGACAGTTTCCATAGAACCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGC  3022

Query 1571  TGAATTATGACCGGAAGGAGCTGGAGAAGAGGCGAGAGGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCTGG  1644
            |||||||||||||||||||.|||||.||||||||.||.|||||||||||||||||||||||||||.|.||||||
Sbjct 3023  TGAATTATGACCGGAAGGAACTGGAAAAGAGGCGGGAAGAGAGCCAGCATGAGATCAAGGATGTGCTGGTCTGG  3096

Query 1645  ACCAACGACCAGGTGGTTCATTGGGTCCAGTCTATTGGGCTCCGGGACTACGCAGGAAACCTGCATGAGAGTGG  1718
            |||||.||||||||||||||.||||||||||||||.|||||..|||||||.|||||||||||.||.||||||||
Sbjct 3097  ACCAATGACCAGGTGGTTCACTGGGTCCAGTCTATAGGGCTAAGGGACTATGCAGGAAACCTACACGAGAGTGG  3170

Query 1719  TGTGCATGGAGCCTTGCTGGCCCTGGACGAGAACTTCGACCACAACACACTGGCCCTGATCCTCCAGATCCCCA  1792
            |||||||||.|||.|||||||||||||.||.||||||||||||||||||||||||.||.|.||.||||||||||
Sbjct 3171  TGTGCATGGCGCCCTGCTGGCCCTGGATGAAAACTTCGACCACAACACACTGGCCTTGGTTCTGCAGATCCCCA  3244

Query 1793  CACAGAACACCCAGGCACGCCAAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCTTGGGCACAGACCGGAAG  1866
            ||||||.|||||||||.||||||||||||||.||||||||||||||||||||||||||||||||||||.||||.
Sbjct 3245  CACAGAGCACCCAGGCCCGCCAAGTGATGGAGAGAGAGTTCAATAACCTGTTGGCCTTGGGCACAGACAGGAAA  3318

Query 1867  CTGGATGACGGGGATGACAAGGTGTTTCGCCGCGCGCCCTCCTGGAGGAAGCGCTTCCGGCCGCGGGAGCACCA  1940
            .||||||||||.||.||.||||||||.|||||.||.||||||||||||||.|||||||||||.|||||.|||||
Sbjct 3319  TTGGATGACGGAGAAGAGAAGGTGTTCCGCCGAGCACCCTCCTGGAGGAAACGCTTCCGGCCTCGGGATCACCA  3392

Query 1941  CGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGACCCTCCCGGCGGGCTTCCGTGTGTCCACCCTGGGGACCC  2014
               |.||||.||||||.|..||.|.||.|||||||||||||||||||||||||||||||||||.|||||..|.|
Sbjct 3393  ---TAGCGGTGGCATGTTGGGCACCTCAGCGGAGACCCTCCCGGCGGGCTTCCGTGTGTCCACGCTGGGTCCGC  3463

Query 2015  TGCAGCCCCCACCGGCCCCGCCAAAGAAGATCATGCCTGAAGCTCACTCCCACTATCTCTACGGACACATGCTC  2088
            |||||||.|||||.||||||||.||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 3464  TGCAGCCTCCACCTGCCCCGCCTAAGAAGATCATGCCGGAAGCTCACTCCCACTATCTCTACGGACACATGCTC  3537

Query 2089  TCCGCCTTCCGGGAC  2103
            |||||||||||||||
Sbjct 3538  TCCGCCTTCCGGGAC  3552

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