Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07247
- Subject:
- XM_017002607.2
- Aligned Length:
- 3788
- Identities:
- 2086
- Gaps:
- 1687
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGTGAGGTGATGCCCACAATCAATGAGGGGGACCGCCTGGGTCCCCCTCATGGCGCCGATGCTGACGCCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTCGAGCAGCTGATGGTGAACATGCTGGACGAGCGGGAGAAGTTGCTGGAGTCTCTTCGGGAGAGTCAGGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTGGCGGCCACACAGAGCCGGCTCCAGGATGCCATACACGAGCGGGACCAGCTCCAGCGCCACCTTAACTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCCTCCCCCAGGAATTTGCCACCTTAACCCGGGAGCTGAGCATGTGTCGGGAGCAGCTTCTAGAGCGGGAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAGATATCAGAACTGAAAGCAGAACGGAATAACACACGGCTGCTTCTGGAACATCTGGAGTGCCTGGTGTCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCATGAACGGTCACTGCGGATGACTGTGGTGAAGCGCCAGGCCCAGTCACCTTCGGGGGTCTCCAGTGAGGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGGTGCTGAAGGCCCTCAAGTCACTGTTTGAGCACCACAAGGCCCTGGATGAGAAGGTGCGAGAGCGGCTCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCAGCGCTGGAGCGAGTCACCACCTTGGAGGAGCAGCTGGCAGGTGCCCACCAGCAGGTGTCTGCCCTGCAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGGGGCAGGGGTGCGGGATGGAGCGGCAGAAGAGGAGGGGACTGTGGAGCTGGGGCCGAAACGCCTGTGGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGGATACGGGCCGGGTAGAGGAGCTGCAGGAGCTCCTGGAGAAGCAGAACTTTGAGTTGAGCCAGGCCCGGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCGACTGGTCACCCTAACAACAACCGTGACTGAACTCGAGGAGGACCTGGGCACGGCCCGCCGGGACCTCATCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTCGGAGGAGCTGAGCAGCAAGCATCAGCGGGACCTCCGGGAGGCTCTGGCCCAGAAGGAGGACATGGAAGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGGATTACTACACTGGAGAAGCGCTACCTGGCTGCTCAGCGTGAGGCAACATCCATCCATGACCTCAATGACAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTGGAGAATGAGCTGGCCAACAAGGAGTCCCTGCACCGCCAGGCTGAAGAACGGCATGGCAACATTGAGGAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTGCGGCAGCTGGAGGGACAGCTGGAGGAGAAGAACCAGGAGCTGGCACGGGTGCGCCAGCGGGAAAAGATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATGAGGACCACAACAAGCGGCTGTCGGACACAGTGGACCGGCTGCTCAGCGAGTCCAACGAGCGTCTGCAGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCACCTGAAGGAGCGCATGGCTGCCCTGGAGGAGAAGAACACGTTGATCCAGGAGTTGGAGAGCTCCCAGCGGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGATTGAGGAGCAGCACCACCACAAGGGCCGCCTGTCTGAAGAGATTGAGAAGCTGCGCCAAGAGGTGGACCAG 1332
Query 1 ---------------------------------------------------ATGGGCAGTGCAGCAGACGTGCG 23
|||||||||||||||||||||||
Sbjct 1333 CTGAAGGGCCGAGGGGGGCCGTTTGTGGATGGCGTCCACTCCAGGTCGCACATGGGCAGTGCAGCAGACGTGCG 1406
Query 24 GTTCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCTG 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GTTCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCTACTCGGCATTGAGGGAAGAGTCTG 1480
Query 98 CCAAGGACTGGGAGACTTCTCCACTGCCTGGGATGCTGGCCCCGGCAGCTGGCCCTGCCTTTGACAGTGACCCT 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCAAGGACTGGGAGACTTCTCCACTGCCTGGGATGCTGGCCCCGGCAGCTGGCCCTGCCTTTGACAGTGACCCT 1554
Query 172 GAGATCTCCGACGTGGATGAGGATGAGCCAGGGGGTCTGGTGGGCTCTGCGGATGTTGTCTCCCCCAGCGGCCA 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GAGATCTCCGACGTGGATGAGGATGAGCCAGGGGGTCTGGTGGGCTCTGCGGATGTTGTCTCCCCCAGCGGCCA 1628
Query 246 CTCAGATGCCCAGACCCTGGCCATGATGCTGCAGGAGCAGCTGGATGCCATCAATGAGGAAATCAGGATGATTC 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CTCAGATGCCCAGACCCTGGCCATGATGCTGCAGGAGCAGCTGGATGCCATCAATGAGGAAATCAGGATGATTC 1702
Query 320 AGGAAGAGAAGGAGTCCACGGAGCTCCGCGCGGAGGAGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAGCC 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGGAAGAGAAGGAGTCCACGGAGCTCCGCGCGGAGGAGATTGAGACGCGTGTAACCAGTGGCAGCATGGAAGCC 1776
Query 394 CTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGTCCCTGGCCAGCGCGTC 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGACGGCCCTGTCCCTGGCCAGCGCGTC 1850
Query 468 CCCACCACTCAGCGGCCGCTCCACACCTAAGCTCACCTCCCGCAGTGCTGCCCAGGACCTGGACCGAATGGGGG 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CCCACCACTCAGCGGCCGCTCCACACCTAAGCTCACCTCCCGCAGTGCTGCCCAGGACCTGGACCGAATGGGGG 1924
Query 542 TCATGACCCTGCCCAGTGACTTAAGAAAGCATAGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGAGAACCGA 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TCATGACCCTGCCCAGTGACTTAAGAAAGCATAGGAGGAAGCTGCTGTCGCCAGTGTCTCGGGAAGAGAACCGA 1998
Query 616 GAGGATAAAGCCACCATAAAATGTGAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAGAGAAGCTTGG 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GAGGATAAAGCCACCATAAAATGTGAGACTTCTCCTCCTTCCTCACCCAGGACGCTGCGGCTAGAGAAGCTTGG 2072
Query 690 CCACCCAGCCCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGGATCAGGGCAGCAACCCCAGCAGCAGCAACA 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CCACCCAGCCCTGAGCCAGGAAGAAGGCAAGAGTGCCTTGGAGGATCAGGGCAGCAACCCCAGCAGCAGCAACA 2146
Query 764 GCAGCCAGGACTCCCTGCACAAGGGCGCCAAGCGAAAGGGCATCAAGTCGTCCATTGGCCGCCTGTTTGGGAAG 837
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GCAGCCAGGACTCCCTGCACAAGGGCGCCAAGCGCAAGGGCATCAAGTCGTCCATTGGCCGCCTGTTTGGGAAG 2220
Query 838 AAGGAGAAGGGCAGGCTGATCCAGCTGAGTCGGGATGGAGCCACAGGCCATGTTCTGCTAACAGACTCCGAATT 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AAGGAGAAGGGCAGGCTGATCCAGCTGAGTCGGGATGGAGCCACAGGCCATGTTCTGCTAACAGACTCCGAATT 2294
Query 912 CAGTATGCAGGAGCCTATGGTGCCTGCCAAGCTGGGGACCCAGGCAGAGAAGGACCGGCGGCTAAAGAAGAAAC 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CAGTATGCAGGAGCCTATGGTGCCTGCCAAGCTGGGGACCCAGGCAGAGAAGGACCGGCGGCTAAAGAAGAAAC 2368
Query 986 ACCAGCTGCTTGAAGATGCCAGCAGGAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTACTGTGGTCTCCTGG 1059
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ACCAGCTGCTTGAAGATGCCCGCAGGAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTACTGTGGTCTCCTGG 2442
Query 1060 TTGGAGCTCTGGGTGGGGATGCCTGCCTGGTATGTGGCAGCCTGCCGGGCCAACGTCAAGAGTGGTGCCATCAT 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 TTGGAGCTCTGGGTGGGGATGCCTGCCTGGTATGTGGCAGCCTGCCGGGCCAACGTCAAGAGTGGTGCCATCAT 2516
Query 1134 GTCCGCTCTGTCGGACACAGAGATCCAGCGGGAGATCGGCATCAGCAATGCCCTGCACCGGCTCAAGCTCCGCC 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GTCCGCTCTGTCGGACACAGAGATCCAGCGGGAGATCGGCATCAGCAATGCCCTGCACCGGCTCAAGCTCCGCC 2590
Query 1208 TGGCCATTCAGGAGATGGTGTCATTGACCAGCCCCTCTGCCCCACCCACCTCCAGGACTTCTTCTGGGAATGTC 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 TGGCCATTCAGGAGATGGTGTCATTGACCAGCCCCTCTGCCCCACCCACCTCCAGGACTTCTTCTGGGAATGTC 2664
Query 1282 TGGGTCACCCATGAAGAGATGGAAACTCTGGAAACATCTACTAAAACAGACAGTGAGGAGGGCAGCTGGGCTCA 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 TGGGTCACCCATGAAGAGATGGAAACTCTGGAAACATCTACTAAAACAGACAGTGAGGAGGGCAGCTGGGCTCA 2738
Query 1356 GACCCTGGCCTATGGGGACATGAACCATGAGTGGATTGGGAATGAATGGCTACCCAGCCTGGGGCTCCCGCAGT 1429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GACCCTGGCCTATGGGGACATGAACCATGAGTGGATTGGGAATGAATGGCTACCCAGCCTGGGGCTCCCGCAGT 2812
Query 1430 ACCGCAGCTACTTCATGGAGTGCCTGGTGGACGCCCGCATGCTGGACCACCTCACCAAGAAGGACCTGCGGGTC 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 ACCGCAGCTACTTCATGGAGTGCCTGGTGGACGCCCGCATGCTGGACCACCTCACCAAGAAGGACCTGCGGGTC 2886
Query 1504 CACCTGAAGATGGTGGACAGCTTCCATCGAACCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGCTGAATTA 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CACCTGAAGATGGTGGACAGCTTCCATCGAACCAGTCTTCAGTATGGCATCATGTGTCTGAAGAGGCTGAATTA 2960
Query 1578 TGACCGGAAGGAGCTGGAGAAGAGGCGAGAGGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCTGGACCAACG 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 TGACCGGAAGGAGCTGGAGAAGAGGCGAGAGGAGAGCCAGCATGAGATCAAGGATGTGTTAGTCTGGACCAACG 3034
Query 1652 ACCAGGTGGTTCATTGGGTCCAGTCTATTGGGCTCCGGGACTACGCAGGAAACCTGCATGAGAGTGGTGTGCAT 1725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 ACCAGGTGGTTCATTGGGTCCAGTCTATTGGGCTCCGGGACTACGCAGGAAACCTGCATGAGAGTGGTGTGCAT 3108
Query 1726 GGAGCCTTGCTGGCCCTGGACGAGAACTTCGACCACAACACACTGGCCCTGATCCTCCAGATCCCCACACAGAA 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 GGAGCCTTGCTGGCCCTGGACGAGAACTTCGACCACAACACACTGGCCCTGATCCTCCAGATCCCCACACAGAA 3182
Query 1800 CACCCAGGCACGCCAAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGGATG 1873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 CACCCAGGCACGCCAAGTGATGGAAAGAGAGTTCAATAACCTGTTGGCCTTGGGCACAGACCGGAAGCTGGATG 3256
Query 1874 ACGGGGATGACAAGGTGTTTCGCCGCGCGCCCTCCTGGAGGAAGCGCTTCCGGCCGCGGGAGCACCACGGTCGC 1947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 ACGGGGATGACAAGGTGTTTCGCCGCGCGCCCTCCTGGAGGAAGCGCTTCCGGCCGCGGGAGCACCACGGTCGC 3330
Query 1948 GGCGGCATGCTCAGCGCTTCCGCGGAGACCCTCCCGGCGGGCTTCCGTGTGTCCACCCTGGGGACCCTGCAGCC 2021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 GGCGGCATGCTCAGCGCTTCCGCGGAGACCCTCCCGGCGGGCTTCCGTGTGTCCACCCTGGGGACCCTGCAGCC 3404
Query 2022 CCCACCGGCCCCGCCAAAGAAGATCATGCCTGAAGCTC--ACTCCC-------ACTATC-------------TC 2073
|||||||||||||||||||||||||||||||||||||| |.||.| |||.|| ||
Sbjct 3405 CCCACCGGCCCCGCCAAAGAAGATCATGCCTGAAGCTCCTAGTCTCGTCCGTGACTTTCCGGTTGCCCTGGATC 3478
Query 2074 TACGGACACAT--GCTCTCCGCCTTCCGGGAC------------------------------------------ 2103
|..|.|.|.|| |..|.||.||| |||.||
Sbjct 3479 TCAGAATATATTCGTCCACCCCCT--CGGCACCCCATTACCCCGAGTCCCACCGTGTGTCCGTTGTAAGTCCGG 3550
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3551 TGGATGTGGCTGGGGTTTCCTGGTATTGTGGAGGCACCCAGGTTGTCCATGCTTGGGATTCTGGGGGAAGGAGA 3624
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3625 GAAGGGCAGCTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGGACCCAGCCTGGTCTGCACTGCAACCTCCA 3698
Query 2104 -------------------------------------------------------------------------- 2103
Sbjct 3699 CCAGGACCAGGATCCTGGGCCACAGGCTGGGATGGTCCTTCCAAGAAAGGGTCATTTCAGACGCAGCCCTGCTT 3772
Query 2104 -------------- 2103
Sbjct 3773 GGGCTATTCAATCT 3786