Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07328
Subject:
XM_017315425.1
Aligned Length:
3024
Identities:
2685
Gaps:
6

Alignment

Query    1  ATGGCCGCCGCGGAGACCCAGTCGCTACGGGAGCAGCCAGAGATGGAAGATGC---TAATTCTGAAAAGAGTAT  71
            |||||||||.|||||.|||.|||.||.||||||||..|.||||||||.|||||   ||||||||||||||||.|
Sbjct    1  ATGGCCGCCACGGAGCCCCCGTCCCTGCGGGAGCAAGCTGAGATGGATGATGCTGATAATTCTGAAAAGAGTGT  74

Query   72  AAATGAAGAAAATGGAGAAGTATCAGAAGACCAGTCTCAAAATAAGCACAGTCGTCACAAAAAAAAGAAGCATA  145
            ||||||||||||||||||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||||
Sbjct   75  AAATGAAGAAAATGGAGAGGTATCAGAAGACCAATCTCAAAATAAACACAGTCGTCACAAAAAAAAGAAGCATA  148

Query  146  AACACAGAAGTAAACATAAGAAACATAAACATTCCTCAGAAGAAGACAAGGATAAAAAACATAAACATAAGCAT  219
            ||||||||||||||||||||||||||||||||||||||||||||||.|.||||||||||||.||||||||||||
Sbjct  149  AACACAGAAGTAAACATAAGAAACATAAACATTCCTCAGAAGAAGATAGGGATAAAAAACACAAACATAAGCAT  222

Query  220  AAACATAAGAAACACAAAAGAAAAGAGGTTATTGATGCTTCTGATAAAGAGGGTATGTCTCCAGCAAAAAGAAC  293
            ||.||||||||.||||||.|.|||||.|||||.||.|||||.||.|||||.||..||||.||.|||||||||||
Sbjct  223  AAGCATAAGAAGCACAAACGGAAAGAAGTTATCGAGGCTTCCGACAAAGAAGGCCTGTCCCCTGCAAAAAGAAC  296

Query  294  TAAACTTGATGATTTAGCTTTGCTAGAAGACTTGGAAAAACAGAGAGCCTTGATTAAGGCCGAACTTGATAATG  367
            |||.||||||||||||||||||||.||||||||||||||.|||||||||||||||||.||.||.||||||||||
Sbjct  297  TAAGCTTGATGATTTAGCTTTGCTGGAAGACTTGGAAAAGCAGAGAGCCTTGATTAAAGCTGAGCTTGATAATG  370

Query  368  AGTTAATGGAAGGAAAGGTCCAGTCTGGTATGGGGCTCATTTTGCAAGGTTATGAGTCTGGCTCTGAAGAAGAG  441
            ||||||||||.||.||||||||||||||.||||||||||||||||||||.||||||||||||||.||||||||.
Sbjct  371  AGTTAATGGAGGGGAAGGTCCAGTCTGGAATGGGGCTCATTTTGCAAGGCTATGAGTCTGGCTCCGAAGAAGAA  444

Query  442  GGGGAAATTCATGAAAAGGCAAGAAATGGAAATAGGTCTAGTACTAGATCTTCAAGTACAAAGGGGAAACTTGA  515
            ||.||.|||||.|||||||||||||||||.||.|||||.|||||.||.|||||.|||||...|||.||||||||
Sbjct  445  GGAGAGATTCACGAAAAGGCAAGAAATGGGAACAGGTCCAGTACCAGGTCTTCCAGTACTCGGGGAAAACTTGA  518

Query  516  ACTTGTGGACAATAAAATTACTACAAAGAAACGAAGTAAAAGCAGATCCAAAGAACGGACTAGACATAGGTCTG  589
            |.||..||||||.||||.||.|.||||||||||||||||.||||||||||||||||||||.||.||.||.||.|
Sbjct  519  AATTACGGACAACAAAAATAGTGCAAAGAAACGAAGTAAGAGCAGATCCAAAGAACGGACCAGGCACAGATCGG  592

Query  590  ATAAAAAGAAAAGTAAGGGGGGTATTGAAATCGTTAAAGAGAAAACAACTAGGAGCAAGTCAAAGGAGAGGAAA  663
            |.||||.||||||.|||||||.|...|||||..|.|.|||||||.|||..|||||||||||.||||||||||.|
Sbjct  593  ACAAAAGGAAAAGCAAGGGGGCTGGGGAAATGCTGAGAGAGAAAGCAAACAGGAGCAAGTCCAAGGAGAGGAGA  666

Query  664  AAATCTAAAAGCCCATCCAAAAGAAGTAAGTCTCAAGATCAAGCAAGGAAATCAAAATCCCCTACCCTTAGAAG  737
            |||||.||||||||||||||||||||.|||||||||||.|||||.||.||.|||||.||||||.|.||.|||.|
Sbjct  667  AAATCCAAAAGCCCATCCAAAAGAAGCAAGTCTCAAGACCAAGCTAGAAAGTCAAAGTCCCCTCCACTCAGACG  740

Query  738  GCGATCTCAAGAGAAAATTGGTAAGGCCAGATCTCCTACTGATGATAAGGTTAAAATTGAAGATAAAAGTAAAT  811
            |||.||.|||||||||.|.||.|||||||||||||||.||||.||.|||.|.||.|.||||||.|||.|.|||.
Sbjct  741  GCGGTCCCAAGAGAAAGTGGGGAAGGCCAGATCTCCTGCTGAGGAGAAGATGAAGAGTGAAGAGAAAGGCAAAA  814

Query  812  CAAAAGATAGGAAAAAATCCCCAATTATAAATGAAAGTAGAAGTCGCGATCGAGGTAAAAAATCCAGATCCCCA  885
            .|||.||||||||||||||.||||||.||||||||   ||.|||||.|||.||..|||||||||||..||||||
Sbjct  815  TAAAGGATAGGAAAAAATCACCAATTGTAAATGAA---AGGAGTCGAGATAGATCTAAAAAATCCAAGTCCCCA  885

Query  886  GTTGATTTAAGAGGTAAATCCAAAGACAGAAGGTCACGGTCCAAAGAGAGAAAATCAAAACGGTCTGAAACTGA  959
            |||||.|||||||.||||||||||||||||||||||.|||||||||||.|.||.||||||||.|||||||.|||
Sbjct  886  GTTGACTTAAGAGATAAATCCAAAGACAGAAGGTCAAGGTCCAAAGAGCGGAAGTCAAAACGATCTGAAATTGA  959

Query  960  TAAAGAAAAGAAGCCAATTAAATCTCCCTCTAAAGATGCTTCATCTGGGAAAGAAAATAGGTCACCCAGCAGAA  1033
            .|||||||||||||||||||||||.||.||.||.||||||||.||||||||.|||||||||||||||||.||||
Sbjct  960  CAAAGAAAAGAAGCCAATTAAATCACCTTCAAAGGATGCTTCTTCTGGGAAGGAAAATAGGTCACCCAGTAGAA  1033

Query 1034  GACCTGGTCGTAGTCCTAAAAGAAGAAGTTTGTCTCCAAAACCACGTGATAAATCAAGAAGAAGCAGGTCTCCA  1107
            |||||||.||||||||||||||||||||||||||||||||||..||.||.||.|||||||||||.||||||||.
Sbjct 1034  GACCTGGCCGTAGTCCTAAAAGAAGAAGTTTGTCTCCAAAACTGCGAGACAAGTCAAGAAGAAGTAGGTCTCCG  1107

Query 1108  CTTTTGAATGATAGAAGATCTAAGCAGAGCAAATACCCCTCGCGGACACTGTCTCCTGGGAGAAGAGCCAAGAG  1181
            |||.|.|||||.||||||||||||||||||||||..||.||.||.||.||||||||.||.|||||.||||||||
Sbjct 1108  CTTCTCAATGACAGAAGATCTAAGCAGAGCAAATCGCCTTCTCGAACTCTGTCTCCAGGCAGAAGGGCCAAGAG  1181

Query 1182  CCGATCCTTAGAAAGAAAACGACGAGAACCAGAGAGGAGACGACTTTCTTCTCCAAGAACACGACCTCGAGATG  1255
            |||||||||||||||||||||..|||||||||||||||||||||||||||||||.||||||.||||||||||||
Sbjct 1182  CCGATCCTTAGAAAGAAAACGGAGAGAACCAGAGAGGAGACGACTTTCTTCTCCGAGAACAAGACCTCGAGATG  1255

Query 1256  ATATCCTCAGTAGACGTGAAAGATCAAAAGATGCCAGCCCCATCAATAGATGGTCTCCAACCCGAAGAAGAAGT  1329
            |||||||..|||||.|||||.|.||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1256  ATATCCTTGGTAGATGTGAACGGTCAAAAGATGCCAGCCCCATCAATAGGTGGTCTCCAACCCGAAGAAGAAGT  1329

Query 1330  AGATCTCCCATTAGAAGGAGGTCTCGTTCCCCACTCAGACGTAGCAGGTCTCCAAGAAGAAGAAGCAGATCTAC  1403
            ||.|||||.||||||||||||||.|||||||||.|.|||||.|||||||||||.||||||||||||||.|||.|
Sbjct 1330  AGGTCTCCAATTAGAAGGAGGTCCCGTTCCCCATTGAGACGCAGCAGGTCTCCTAGAAGAAGAAGCAGGTCTCC  1403

Query 1404  TCGGAGAAGGGACAGAGGTCGGAGGAGCAGATCACGCTTGCGAAGGCGGTCTCGATCACGCGGTGGTCGTAGAC  1477
            |||||||||.||.||..|.||.||||||||.|||||||||.|.||..|||||||||||||.|||||||.|||..
Sbjct 1404  TCGGAGAAGAGATAGGAGCCGAAGGAGCAGGTCACGCTTGAGGAGAAGGTCTCGATCACGGGGTGGTCATAGGA  1477

Query 1478  GAAGGAGCAGAAGCAAAGTAAAGGAAGATAAATTTAAAGGAAGTCTTTCTGAAGGAATGAAAGTTGAGCAGGAA  1551
            ||||||||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||.||.
Sbjct 1478  GAAGGAGCAGAAGCAAAGTAAAGGAAGATAAATTTAAAGGAAGTCTCTCAGAAGGAATGAAAGTTGAGCAAGAG  1551

Query 1552  TCTTCGTCTGATGATAACCTTGAAGACTTTGATGTAGAGGAAGAAGATGAAGAAGCCCTAATAGAACAGAGAAG  1625
            |||||.||||||||||||||||||||.||||||||.|||||.|||||||||||.||.|||||||||||||||||
Sbjct 1552  TCTTCATCTGATGATAACCTTGAAGATTTTGATGTGGAGGAGGAAGATGAAGAGGCTCTAATAGAACAGAGAAG  1625

Query 1626  AATCCAAAGGCAGGCAATTGTTCAGAAATATAAATACCTTGCTGAAGATAGCAACATGTCTGTGCCATCTGAAC  1699
            |||.||.|||||.||||||||.||||||||||||||.|||||||||||||||||.||.||||||||||||||.|
Sbjct 1626  AATACAGAGGCAAGCAATTGTGCAGAAATATAAATATCTTGCTGAAGATAGCAATATATCTGTGCCATCTGAGC  1699

Query 1700  CAAGCAGCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGATGACATTCTGGAGCGAGTAGCTGCTGAT  1773
            |||||||||||||||||||.||.|||.|||||||.||.||.|||||.|||||..||||||||||.|||||||||
Sbjct 1700  CAAGCAGCCCCCAGAGCAGCACAAGATCACGATCTCCTTCGCCAGACGACATCTTGGAGCGAGTTGCTGCTGAT  1773

Query 1774  GTTAAAGAGTATGAACGGGAAAATGTTGATACATTTGAGGCCTCAGTGAAAGCCAAGCATAATCTAATGACAGT  1847
            ||.|||||.|||||.|||||.||||||||.||.||||||||||||||.||||||||||||||||||||||||||
Sbjct 1774  GTAAAAGAATATGAGCGGGAGAATGTTGACACCTTTGAGGCCTCAGTAAAAGCCAAGCATAATCTAATGACAGT  1847

Query 1848  TGAACAGAATAATGGTTCATCTCAGAAGAAGTTGTTGGCACCTGATATGTTTACAGAATCTGATGATATGTTTG  1921
            |||||||||||||||.|||||||||||||||.|.|||||||||||.||||||||||||||||||||.|||||||
Sbjct 1848  TGAACAGAATAATGGCTCATCTCAGAAGAAGATTTTGGCACCTGACATGTTTACAGAATCTGATGACATGTTTG  1921

Query 1922  CTGCGTATTTTGATAGTGCTCGTCTTCGGGCCGCTGGCATTGGAAAAGATTTCAAAGAGAATCCCAACCTCAGA  1995
            ||||.||||||||||||||||||||.||.||.|||||||||||.||||||||||||||.|||||||||||||||
Sbjct 1922  CTGCTTATTTTGATAGTGCTCGTCTCCGAGCTGCTGGCATTGGGAAAGATTTCAAAGAAAATCCCAACCTCAGA  1995

Query 1996  GATAACTGGACCGATGCAGAAGGCTATTATCGTGTGAACATAGGTGAAGTCCTAGATAAACGTTACAATGTGTA  2069
            |||||.|||||.|||||||||||||||||.|||||||||||.||.||||||||||||||||||||.||||||||
Sbjct 1996  GATAATTGGACAGATGCAGAAGGCTATTACCGTGTGAACATCGGGGAAGTCCTAGATAAACGTTATAATGTGTA  2069

Query 2070  TGGCTACACTGGGCAAGGTGTATTCAGTAATGTTGTACGAGCCAGAGATAATGCAAGAGCCAACCAAGAAGTGG  2143
            |||||||||||||||.|||||.|||||.||||||||.||.|||||.||||||||.|||||||||||.|||||||
Sbjct 2070  TGGCTACACTGGGCAGGGTGTGTTCAGCAATGTTGTGCGTGCCAGGGATAATGCGAGAGCCAACCAGGAAGTGG  2143

Query 2144  CTGTAAAGATCATCAGAAACAATGAGCTCATGCAAAAGACTGGTTTAAAAGAATTAGAGTTCTTGAAAAAACTT  2217
            ||||||||||||||||.||||||||.||||||||||||||||||||||||||..||||.|||||||||||||||
Sbjct 2144  CTGTAAAGATCATCAGGAACAATGAACTCATGCAAAAGACTGGTTTAAAAGAGCTAGAATTCTTGAAAAAACTT  2217

Query 2218  AATGATGCTGATCCTGATGACAAATTTCATTGTCTGAGACTCTTAAGGCACTTCTATCACAAGCAGCATCTTTG  2291
            |||||||||||||||||||||||.||.|||||.|||.|.|||||.||.|||||.||.|||||.|||||.||.||
Sbjct 2218  AATGATGCTGATCCTGATGACAAGTTCCATTGCCTGCGCCTCTTCAGACACTTTTACCACAAACAGCACCTCTG  2291

Query 2292  TCTGGTATTCGAGCCTCTCAGCATGAACTTACGAGAGGTGTTAAAAAAATATGGTAAAGATGTTGGTCTTCATA  2365
            |||.||.||.||.||||||||.|||||.||.||||||||.|||||||||||||||||.|||||.|||||.||||
Sbjct 2292  TCTCGTCTTTGAACCTCTCAGTATGAATTTGCGAGAGGTATTAAAAAAATATGGTAAGGATGTCGGTCTCCATA  2365

Query 2366  TTAAAGCTGTAAGATCCTATAGTCAGCAGTTGTTCCTGGCATTGAAACTCCTTAAAAGATGCAATATCCTACAT  2439
            ||||.||||||.||||.||.|||||||||||||||||||||||||||||||||||||||||.||||||.|||||
Sbjct 2366  TTAAGGCTGTACGATCGTACAGTCAGCAGTTGTTCCTGGCATTGAAACTCCTTAAAAGATGTAATATCTTACAT  2439

Query 2440  GCAGATATCAAGCCAGACAATATCCTGGTTAATGAATCCAAAACTATTTTAAAGCTTTGCGATTTTGGGTCGGC  2513
            |||||||||||.||.||.|||||.||||||||||||||||||||.||||||||.|||||.||||||||.|||||
Sbjct 2440  GCAGATATCAAACCGGATAATATTCTGGTTAATGAATCCAAAACAATTTTAAAACTTTGTGATTTTGGATCGGC  2513

Query 2514  TTCACATGTTGCGGATAATGACATAACACCTTATCTTTTCAGTAGATTTTATCGTGCTCCTGAAATCATTATAG  2587
            .|||||||||||.|||||||||||.||.|||||||||.||||||||||||||||||||||.||.||||||||||
Sbjct 2514  CTCACATGTTGCAGATAATGACATTACGCCTTATCTTGTCAGTAGATTTTATCGTGCTCCGGAGATCATTATAG  2587

Query 2588  GTAAAAGCTATGACTATGGTATAGATATGTGGTCTGTAGGTTGCACCTTATACGAACTCTATACTGGAAAAATT  2661
            ||||||||||||||||.|||||.||||||||||||||||||||.||||||||.||||||||.|||||||||||.
Sbjct 2588  GTAAAAGCTATGACTACGGTATCGATATGTGGTCTGTAGGTTGTACCTTATATGAACTCTACACTGGAAAAATC  2661

Query 2662  TTATTCCCTGGCAAAACCAATAACCATATGCTGAAGCTTGCAATGGATCTCAAAGGAAAGATGCCAAATAAGAT  2735
            |||||||||||||||||.||||||||||||.|||||||.||.|||||.||.||||||||.||||||||||||||
Sbjct 2662  TTATTCCCTGGCAAAACTAATAACCATATGTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGAT  2735

Query 2736  GATTCGAAAAGGTGTGTTCAAAGATCAGCATTTTGATCAAAATCTCAACTTCATGTACATAGAAGTTGATAAAG  2809
            |||.||.||||||||.|||||||||||.||||||||.||||||||.|||||||||||||||||.||||||||||
Sbjct 2736  GATCCGGAAAGGTGTATTCAAAGATCAACATTTTGACCAAAATCTGAACTTCATGTACATAGAGGTTGATAAAG  2809

Query 2810  TAACAGAGAGGGAGAAAGTTACTGTTATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGATTGGG  2883
            |.|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2810  TGACAGAGAGGGAGAAAGTTACTGTCATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGATTGGG  2883

Query 2884  TGCCAGAGACTTCCTGAAGACCAACGTAAGAAAGTACACCAGCTAAAGGACTTGTTGGACCAGATTCTGATGTT  2957
            ||||||.|||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||.||.|||||
Sbjct 2884  TGCCAGCGACTTCCTGAAGATCAACGTAAAAAAGTACACCAGCTAAAGGACTTGTTGGACCAGATCCTAATGTT  2957

Query 2958  GGACCCAGCTAAACGAATTAGCATCAACCAGGCCCTACAGCACGCCTTCATCCCGGAAAAAATT  3021
            ||||||||||||.|||||||||||||||||||||||.|||||.||.|||||||.||||||||||
Sbjct 2958  GGACCCAGCTAAGCGAATTAGCATCAACCAGGCCCTGCAGCATGCATTCATCCAGGAAAAAATT  3021

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