Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07408
- Subject:
- XM_017005339.2
- Aligned Length:
- 2580
- Identities:
- 1320
- Gaps:
- 1260
Alignment
Query 1 ATGATGAGCATCAAAGCCTTTACGCTTGTCTCTGCTGTGGAGCGGGAGCTGCTGATGGGCGACAAGGAGCGCGT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CAACATAGAGTGCGTGGAGTGCTGCGGCAGGGACCTCTACGTGGGCACCAACGACTGCTTCGTCTACCACTTCC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGTTGGAGGAGAGGCCAGTGCCTGCTGGGCCAGCCACGTTCACTGCCACCAAACAGCTGCAGAGACACTTGGGC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTCAAGAAGCCCGTGAACGAGCTGCGCGCGGCCTCAGCACTCAACAGGCTGCTGGTGCTGTGTGACAACTCCAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAGCCTGGTCAACATGCTGAACCTCGAGCCAGTGCCTTCGGGGGCCCGCATCAAGGGGGCAGCCACGTTTGCAC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGAACGAGAACCCTGTGAGTGGGGACCCCTTCTGTGTAGAAGTTTGCATCATCTCTGTCAAACGCAGAACCATC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CAGATGTTTCTGGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGTGTCGACTGCCGAACAGCCCCTCGCTGT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GGCTGTGGACGGCCACTTCCTGTGTCTGGCTCTGACCACTCAGTACATCATCCACAATTACAGCACAGGCGTCT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CCCAGGACCTTTTTCCCTACTGCAGTGAGGAGAGGCCGCCGATCGTCAAGAGGATAGGGAGACAGGAGTTCCTG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CTGGCGGGCCCCGGAGGGCTGGGCATGTTTGCCACAGTCGCAGGGATATCCCAGCGTGCCCCCGTGCACTGGTC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GGAGAATGTGATTGGGGCGGCTGTGTCCTTTCCATACGTCATAGCGCTCGATGACGAATTCATCACAGTCCACA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 GCATGTTGGATCAGCAACAGAAGCAGACGCTGCCCTTTAAGGAGGGCCATATCCTACAGGACTTTGAAGGAAGA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GTGATCGTTGCCACAAGTAAAGGAGTTTACATCTTGGTTCCATTACCTTTGGAAAAACAAATACAGGATCTTCT 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 AGCAAGCCGCAGAGTAGAAGAGGCTTTGGTTTTAGCAAAAGGAGCCCGGAGGAACATTCCAAAGGAAAAATTTC 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 AGGTAATGTACAGAAGGATTCTGCAGCAGGCGGGATTTATACAGTTTGCACAACTTCAGTTCCTGGAAGCTAAA 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GAGCTCTTCAGAAGCGGCCAGCTTGATGTCCGGGAGCTGATCTCTCTCTACCCCTTCCTGTTGCCCACCTCCTC 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 CTCCTTCACCCGGTCCCACCCTCCTCTTCATGAGTACGCAGACCTGAACCAGCTGACCCAGGGGGACCAGGAGA 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 AGATGGCCAAGTGCAAACGCTTCCTCATGAGCTACCTGAACGAGGTCCGCAGCACAGAGGTAGCAAATGGCTAC 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 --ATGGCCAAGTGCAAACGCTTCCTCATGAGCTACCTGAACGAGGTCCGCAGCACAGAGGTAGCAAATGGCTAC 72
Query 1333 AAGGAGGACATCGACACAGCCTTGCTCAAACTGTATGCAGAGGCTGACCACGACAGCCTGCTGGACCTCCTGGT 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 73 AAGGAGGACATCGACACAGCCTTGCTCAAACTGTATGCAGAGGCTGACCACGACAGCCTGCTGGACCTCCTGGT 146
Query 1407 CACTGAGAACTTCTGTCTTCTGACGGACAGTGCTGCCTGGCTAGAGAAGCACAAAAAGTATTTTGCACTTGGAC 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 147 CACTGAGAACTTCTGTCTTCTGACGGACAGTGCTGCCTGGCTAGAGAAGCACAAAAAGTATTTTGCACTTGGAC 220
Query 1481 TGCTCTATCATTATAATAACCAAGATGCTGCTGCAGTTCAGTTGTGGGTGAACATTGTGAATGGCGATGTCCAG 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 221 TGCTCTATCATTATAATAACCAAGATGCTGCTGCAGTTCAGTTGTGGGTGAACATTGTGAATGGCGATGTCCAG 294
Query 1555 GACTCCACACGCTCAGACCTGTATGAATACATCGTGGATTTTCTTACCTACTGCTTAGACGAGGAACTAGTGTG 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 GACTCCACACGCTCAGACCTGTATGAATACATCGTGGATTTTCTTACCTACTGCTTAGACGAGGAACTAGTGTG 368
Query 1629 GGCCTATGCTGATTGGGTCCTGCAGAAAAGTGAAGAGGTCGGAGTTCAGGTTTTCACCAAGAGACCTTTGGATG 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 369 GGCCTATGCTGATTGGGTCCTGCAGAAAAGTGAAGAGGTCGGAGTTCAGGTTTTCACCAAGAGACCTTTGGATG 442
Query 1703 AACAGCAGAAGAACAGTTTTAATCCAGACGACATTATCAATTGCCTTAAAAAATACCCTAAAGCCCTTGTGAAG 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443 AACAGCAGAAGAACAGTTTTAATCCAGACGACATTATCAATTGCCTTAAAAAATACCCTAAAGCCCTTGTGAAG 516
Query 1777 TATCTGGAACATCTTGTGATAGACAAGAGACTGCAGAAAGAAGAGTATCACACCCACTTAGCTGTGCTGTACCT 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 517 TATCTGGAACATCTTGTGATAGACAAGAGACTGCAGAAAGAAGAGTATCACACCCACTTAGCTGTGCTGTACCT 590
Query 1851 GGAAGAGGTGCTGCTGCAGAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCAAGCTGC 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 GGAAGAGGTGCTGCTGCAGAGGGCCTCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCAAGCTGC 664
Query 1925 GGCGGCTGCTCCAGAAATCTGATTTATACCGAGTCCACTTTCTTCTCGAGAGGCTGCAGGGAGCTGGCCTGCCC 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 GGCGGCTGCTCCAGAAATCTGATTTATACCGAGTCCACTTTCTTCTCGAGAGGCTGCAGGGAGCTGGCCTGCCC 738
Query 1999 ATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAAGGCGCTGCATATCCTGGTGCACGAGCTGCA 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 ATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAAGGCGCTGCATATCCTGGTGCACGAGCTGCA 812
Query 2073 GGACTTTGCAGCGGCCGAGGACTACTGCCTGTGGTGCTCCGAGGGCCGAGACCCACCCCACCGCCAGCAACTCT 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 GGACTTTGCAGCGGCCGAGGACTACTGCCTGTGGTGCTCCGAGGGCCGAGACCCACCCCACCGCCAGCAACTCT 886
Query 2147 TTCACACGCTGCTGGCCATCTACCTGCATGCTGGCCCCACTGCCCACGAGCTGGCCGTGGCTGCCGTGGACCTG 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 TTCACACGCTGCTGGCCATCTACCTGCATGCTGGCCCCACTGCCCACGAGCTGGCCGTGGCTGCCGTGGACCTG 960
Query 2221 CTGAACCGCCACGCCACCGAATTTGATGCAGCCCAGGTGCTGCAGATGCTGCCTGACACCTGGTCAGTGCAGCT 2294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 CTGAACCGCCACGCCACCGAATTTGATGCAGCCCAGGTGCTGCAGATGCTGCCTGACACCTGGTCAGTGCAGCT 1034
Query 2295 CCTCTGCCCATTCCTGATGGGGGCCATGAGGGACAGCATCCATGCCAGGAGGACCATGCAGGTGGCTCTCGGCC 2368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 CCTCTGCCCATTCCTGATGGGGGCCATGAGGGACAGCATCCATGCCAGGAGGACCATGCAGGTGGCTCTCGGCC 1108
Query 2369 TGGCCAGGTCCGAAAACTTAATCTACACCTACGATAAGATGAAGTTGAAAGGAAGCTCAATCCAACTCTCAGAC 2442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 TGGCCAGGTCCGAAAACTTAATCTACACCTACGATAAGATGAAGTTGAAAGGAAGCTCAATCCAACTCTCAGAC 1182
Query 2443 AAAAAGCTTTGTCAGATATGCCAAAATCCCTTTTGTGAGCCTGTGTTTGTTAGATACCCAAATGGTGGTCTTGT 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1183 AAAAAGCTTTGTCAGATATGCCAAAATCCCTTTTGTGAGCCTGTGTTTGTTAGATACCCAAATGGTGGTCTTGT 1256
Query 2517 GCACACCCACTGTGCCGCCAGCAGACACACAAACCCCAGCTCATCCAGTCCTGGCACTCGGACT 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 GCACACCCACTGTGCCGCCAGCAGACACACAAACCCCAGCTCATCCAGTCCTGGCACTCGGACT 1320
