Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07427
- Subject:
- XR_001751423.2
- Aligned Length:
- 2193
- Identities:
- 1399
- Gaps:
- 790
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTCTGCGCCTGCTCCACGTCACTAAACTCGCTACCGCCTGCTCCCCTCCAGAGACCGGGGGCCTTCCAGCAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTCGGACCCCCGAGCACAGAGACCGCCAAGCCAAAGGCGAGTAGCAATCCCTCGGTTCGGAAACGGCGAAAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAACCGCAAGGAGGCCACCACGTCGGGTGGGAGCTACGAAGTTGCCCGTTCCCGGTTACTTCCGGGCTTGCGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGACGACTGCTCTCAAAGGCCAAACTTAATGGATGGACGAGCAGCGCGCTACTGCAGCTTTCTTCCGCCTTAGG 296
Query 1 ----------------ATGAGGAGGCCCCTAAGCAAGTGCGGAATGGAGCCGGGGGGCGGAGATGCCAGCCTCA 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAGGTGGCGGCCAGGGATGAGGAGGCCCCTAAGCAAGTGCGGAATGGAGCCGGGGGGCGGAGATGCCAGCCTCA 370
Query 59 CTTTGCATGGTCTCCAGAACCGCTCCCACGGCAAGATAAAGCTGCGAAAGAGAAAGTCTACCTTGTACTTCAAC 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTTTGCATGGTCTCCAGAACCGCTCCCACGGCAAGATAAAGCTGCGAAAGAGAAAGTCTACCTTGTACTTCAAC 444
Query 133 ACCCAGGAGAAGAGCGCCAGGCGCCGCGGGGATCTTCTTGGAGAAAATATTTATCTGCTCTTGTTTACCTTAGC 206
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 445 ACCCAGGAGAAGAGCGCCAGGCGCCGCGGGGATCTTCTTGGAGAAAATATTTATCTGCTCTTGTTTACCATAGC 518
Query 207 TTTACGAATATTAAACTGCTTTTTAGTGCAGACAAGTTTTGTTCCAGATGAATACTGGCAGTCTCTTGAAGTTT 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTTACGAATATTAAACTGCTTTTTAGTGCAGACAAGTTTTGTTCCAGATGAATACTGGCAGTCTCTTGAAGTTT 592
Query 281 CACATCACATGGTTTTCAATTATGGTTATTTGACTTGGGAATGGACAGAGAGACTGAGGAGTTACACTTATCCC 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CACATCACATGGTTTTCAATTATGGTTATTTGACTTGGGAATGGACAGAGAGACTGAGGAGTTACACTTATCCC 666
Query 355 TTAATCTTTGCAAGCATTTACAAGATTCTTCATCTTTTAGGGAAAGATAGTGTTCAGTTGCTGATTTGGATTCC 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTAATCTTTGCAAGCATTTACAAGATTCTTCATCTTTTAGGGAAAGATAGTGTTCAGTTGCTGATTTGGATTCC 740
Query 429 TAGACTTGCCCAAGCACTTCTGTCTGCTGTAGCAGATGTGAGACTTTACTCATTAATGAAGCAACTAGAAAATC 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TAGACTTGCCCAAGCACTTCTGTCTGCTGTAGCAGATGTGAGACTTTACTCATTAATGAAGCAACTAGAAAATC 814
Query 503 AGGAAGTGGCAAGATGGGTGTTTTTTTGCCAGTTGTGCTCCTGGTTCACATGGTATTGCTGTACCAGAACCCTT 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGGAAGTGGCAAGATGGGTGTTTTTTTGCCAGTTGTGCTCCTGGTTCACATGGTATTGCTGTACCAGAACCCTT 888
Query 577 ACAAACACCATGGAAACTGTTCTCACTATAATTGCTCTTTTCTACTATCCTTTGGAAGGTTCAAAGTCTATGAA 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACAAACACCATGGAAACTGTTCTCACTATAATTGCTCTTTTCTACTATCCTTTGGAAGGTTCAAAGTCTATGAA 962
Query 651 CAGTGTCAAATACTCATCCCTGGTGGCACTTGCCTTCATAATTCGTCCCACAGCTGTCATTCTGTGGACACCTT 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAGTGTCAAATACTCATCCCTGGTGGCACTTGCCTTCATAATTCGTCCCACAGCTGTCATTCTGTGGACACCTT 1036
Query 725 TGCTCTTCAGACATTTCTGTCAAGAACCAAGAAAGCTTGATCTTATTCTACATCATTTTTTACCTGTAGGCTTT 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGCTCTTCAGACATTTCTGTCAAGAACCAAGAAAGCTTGATCTTATTCTACATCATTTTTTACCTGTAGGCTTT 1110
Query 799 GTTACTTTGAGTTTGTCTCTGATGATTGATCGTATTTTTTTTGGCCAATGGACTCTGGTTCAATTTAATTTTTT 872
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTTACTTTGAGTTTGTCTCTGATGATTGATCGTATTTTTTTTGGCCAA-------------------------- 1158
Query 873 GAAATTTAACGTGCTGCAGAACTTGGGAACATTTTATGGTTCTCATCCATGGCACTGGTACTTCAGTCAAGGAT 946
||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1159 -------------------AACTGGGGAACATTTTATGGTTCTCATCCATGGCACTGGTACTTCAGTCAAGGAT 1213
Query 947 TTCCAGTTATCTTGGGTACTCACTTACCCTTCTTTATTCATGGCTGCTATCTAGCACCAAAGAGATACCGGATA 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1214 TTCCAGTTATCTTGGGTACTCACTTACCCTTCTTTATTCATGGCTGCTATCTAGCACCAAAGAGATACCGGATA 1287
Query 1021 CTTTTGGTGACTGTGCTGTGGACACTGCTTGTTTATAGCATGTTGAGCCACAAAGAATTCAGGTTTATTTATCC 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1288 CTTTTGGTGACTGTGCTGTGGACACTGCTTGTTTATAGCATGTTGAGCCACAAAGAATTCAGGTTTATTTATCC 1361
Query 1095 AGTTTTACCATTCTGTATGGTGTTCTGTGGATACTCATTAACCCACCTGAAAACATGGAAGAAACCAGCTCTAA 1168
||||||||||||||||||||||||||||
Sbjct 1362 AGTTTTACCATTCTGTATGGTGTTCTGT---------------------------------------------- 1389
Query 1169 GTTTCCTGTTTTTATCAAATTTGTTCCTCGCCCTTTATACTGGTTTAGTTCATCAACGAGGTACTCTTGATGTC 1242
Sbjct 1390 -------------------------------------------------------------------------- 1389
Query 1243 ATGAGTCATATTCAAAAAGTTTGTTACAACAATCCCAATAAATCTTCAGCTTCAATATTTATAATGATGCCTTG 1316
Sbjct 1390 -------------------------------------------------------------------------- 1389
Query 1317 CCACTCTACTCCTTATTACAGCCATGTTCACTGCCCACTTCCCATGAGATTTCTCCAGTGCCCGCCAGACCTGA 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1390 --------------------GCCATGTTCACTGCCCACTTCCCATGAGATTTCTCCAGTGCCCGCCAGACCTGA 1443
Query 1391 CTGGAAAAAGTCATTATCTTGATGAAGCAGATGTATTTTACCTAAATCCCTTAAACTGGTCACATAGAGAGTTT 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1444 CTGGAAAAAGTCATTATCTTGATGAAGCAGATGTATTTTACCTAAATCCCTTAAACTGGTTACATAGAGAGTTT 1517
Query 1465 CATGATGATGCATCATTGCCTACTCACTTGATCACCTTCAGCATTTTGGAAGAGGAAATAAGTGCTTTCCTAAT 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1518 CATGATGATGCATCATTGCCTACTCACTTGATCACCTTCAGCATTTTGGAAGAGGAAATAAGCGCTTTCCTAAT 1591
Query 1539 TTCAAGCAATTATAAAAGAACTGCTGTTTTCTTCCACACTCACTTGCCAGAGGGTCGAATTGGAAGTCACATAT 1612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1592 TTCAAGCAATTATAAAAGAACTGCTGTTTTCTTCCACACTCACTTGCCAGAGGGTCGAATTGGAAGTCACATAT 1665
Query 1613 ATGTCTATGAACGGAAGTTAAAAGGGAAATTCAACATGAAGATGAAATTC------------------------ 1662
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1666 ATGTCTATGAACGGAAGTTAAAAGGGAAATTCAACATGAAGATGAAATTCTGAACTTTCCTAGATAAATTAACA 1739
Query 1663 -------------------------------------------------------------------------- 1662
Sbjct 1740 TTGCTGGGTGGAAATATTCAGATGCTGCTTAAATACTTCGGTAAACACTGGGTAAGATTCATGGAACTTAGAAA 1813
Query 1663 -------------------------------------------------------------------------- 1662
Sbjct 1814 AAAGCTGTATGAACTGCTTTACCAAATATCACTACTGAGGAAATGTATAAAATACCACATAGTATAAAATTACA 1887
Query 1663 ----------------------------------------------- 1662
Sbjct 1888 TGTTAATACAATGCCAGATTTTAAATAAAGACCTTTAGTTTTCCTCA 1934
