Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07561
- Subject:
- XR_002957280.1
- Aligned Length:
- 2783
- Identities:
- 611
- Gaps:
- 2171
Alignment
Query 1 --------------------------------------------------------------------ATGGGA 6
||||||
Sbjct 1 ATTATCCTCCTTATTGACAAACAGAGCGGTCGCGGCGGCGACTCTCGGCGTGCGGTGATAGCCAAGCCATGGGA 74
Query 7 GACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGCCGAAGCCGTCCTCGGATGAGGGTTACTGGGACTGTAGCGT 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGCCGAAGCCGTCCTCGGATGAGGGTTACTGGGACTGTAGCGT 148
Query 81 CTGCACCTTCCGGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGATGTGCGGAAGGGCACCTCCACCC--- 151
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTGCACCTTCCGGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGATGTGCGGAAGGGCACCTCCACCCGGG 222
Query 152 -------------------------------------------------------------------------- 151
Sbjct 223 ACAGCAAGGAAGGGGGGAAGCTGGTGTCCTACTCCACAGCCAGTCTTGGGGTTAGAGGAACCCTGAGAAATAGA 296
Query 152 -------------------------------------------------------------------------- 151
Sbjct 297 GTAGGTGGTGGCAGCTCAGAAGAGAAGAAACAGGCTGAATACCTGGCACCTGGAAGAAGAAGGAATATAGTACA 370
Query 152 -------------------------------------------------------------------------- 151
Sbjct 371 CAGGGGAGTTGGCCCAGGACAGAGAAGTGGGCCTAGTTTAAAAGAGGCTTGAGGCCCACATGGGGGCCCCTGAC 444
Query 152 -------------------------------------------------------------------------- 151
Sbjct 445 ATTTTTTTTTTTTACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACTTGAGGAGG 518
Query 152 -------------------------------------------------------------------------- 151
Sbjct 519 ACTCAGAGAAGCATTGTCATTTGGATTGAAACTGAAGAGGCTCTGGGCAACTCACCAGAAATCTAAGGGACACT 592
Query 152 ------------------------------------------------------------------------GA 153
||
Sbjct 593 GTGTTCCTGAAAAGAAGAAAAAGCTGGATCACTTACCAGTAACTGGAGTTCTCCTATTGGGTAATCTCCACAGA 666
Query 154 TCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTCAGGAA---- 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCCACATTGTTTGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTCAGGAAGTTC 740
Query 224 -------------------------------------------------------------------------- 223
Sbjct 741 CAGTGGATGCCCATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAGGTGGATCTGTGAGGGAAAAGACC 814
Query 224 ----------------------GGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTT 275
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAATAGGATAACTCAAGTTACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTT 888
Query 276 TGTGCCTCCTACACAGTCAAAGAAAGAGAAAAAAGATAAAGTAGAAAAAGAAAAAAGTGAAAAGGAAACAACTA 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGTGCCTCCTACACAGTCAAAGAAAGAGAAAAAAGATAAAGTAGAAAAAGAAAAAAGTGAAAAGGAAACAACTA 962
Query 350 GCAAAAAGAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGCTCAGCATTTGGAA 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCAAAAAGAATAGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGCTCAGCATTTGGAA 1036
Query 424 GTTACTGTTGGAGATCTGACAGTCATTATTACAGACTTTAAGGAGAAAACAAAGTCACCGCCTGCATCTAGTGC 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTTACTGTTGGAGATCTGACAGTCATTATTACAGACTTTAAGGAGAAAACAAAGTCACCGCCTGCATCTAGTGC 1110
Query 498 TGCCTCTGCAGATCAACACAGTCAAAGCGGCTCTAGCTCTGATAACACAGAGAGAGGAATGTCCAGGTCATCTT 571
|||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGCTTCTGCAGATCAACACAGTCAAAGCGGCTCTAGCTCTGATAACACAGAGAGAGGAATGTCCAGGTCATCTT 1184
Query 572 CACCCAGAGGAGAAGCCTCATCATTGAATGGAGAATCTCAT--------------------------------- 612
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CACCCAGAGGAGAAGCCTCATCATTGAATGGAGAATCTCATTAAAGTTTATTTTCTCCAATTTCTTAGTCACTT 1258
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1259 CTGTCCTACCATGCAAATACACAGATTATGCCAAGAGGTACCACATTTTCATGACAGATACATTCATGCACAAT 1332
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1333 CCATAATTTGAGTTTTACATAAAATAGAAATTTGTTAGAATTTGTTAGATTTTATTGCAATGATGCCTACCAAA 1406
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1407 CATTTCCAGACTTAACATTTTGGTCTCTGCAGTTAAGTGCCATGAAAATGTGGTTGAATTATTCATTATGCAGT 1480
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1481 GTTATTGGTAAGTGTATTTTCACTTTTAGTTTAGTGAATTCTAACACATAATTCTTGAATTCTCTACTATTGGC 1554
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1555 ATGTAACGAATTTAAATTTTTTATAACATAGTGCAAGCTGCCTAAATATGTATTATTTGAGAATTGTGAAACAG 1628
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1629 ATAGTTATATGTATACAAGTCAAAGAACAACTTAACTATTGCTGCAACAGGTTTTTCTTAATGGTTATCCTCTT 1702
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1703 AAATACACCTGCTGGTACTTGGTGTGGTTAAATAGGAAAATTGTTATTAAATAAAGAATTTGTATGAACCTTTG 1776
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1777 CCAATGTTTTTGACACGTTTTACTAATTATTGTTCCTGAATTATGTTTCTGGTTTTATCTATTTTTTGAGGTTT 1850
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1851 TTTTGTTTGCTTATTTTTCAAAACATTCATTTATTGTAATGTTTACTAGCGGACTAGTAAACAATAAAACATTG 1924
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1925 ATTATTTAGCTTTATAATTCAGGTTTAGTGCTATTGTCATTGAACACTGGTATTTTCTGTATCATATAAAACAT 1998
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1999 TAAAATTCAAATAATTATAAGCATTTGGCAAAAACAAGAGAAAAGAAACTTGCCATATTTTACAAGCTGCAATT 2072
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2073 TTAGAAAAGCTTTAACTTAATGATAGTTTTATCATTGTTTTCTTGTCCCAAACTTATCCAGGGCCATAGAAGTA 2146
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2147 TGAATCTAATTAAAACAGAAATGGGAATTATTGCACAGAAATGGGAAATAACTAATTTTAAATCAGTCAAATTG 2220
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2221 GCTTCTTATTAAATACAATAATTCTTATGAAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACA 2294
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2295 TTTCTCAGTATCCTGAAAGGAAAAAAGTATAGCCCCACTTATACTATGTAAAATTACCAATAAAATATTTTTAT 2368
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2369 GACTACAGATTTTGCATTTTTGTTTACAACTATTTAAAGAGTTTTATGTTGTATTTAGAATTTCAACCTAGAAA 2442
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2443 CCACACAGTACTTAAATTCTCCTGGGGTCTCCTGCTTTCTCTTAACCATTTGCTTAATATATATCTACCTAAAG 2516
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2517 GAGACTTCTGAATTGTAAATGAACTTAAAAATAGAATGTGGATGCAAAATATCACATAAGACATCATGATAACA 2590
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2591 TTTGAAGAAAAAATAAAACTGTAGACCCTAACAGTTGTGATATTTGGTGGTTTCATGTGGTAATGTAATTTTCT 2664
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2665 GTTTAATTACAGTACTTTTTACAGGCACAGTGGTACTGTCTTTTTTGTAAGATGCTAGTTGTGAAATACAATTA 2738
Query 613 --------------------------------------------- 612
Sbjct 2739 ATTGCATACAGTAAAAGTCTGTGATTAAAACATTTATATACCTCA 2783
