Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07592
- Subject:
- XR_001783787.1
- Aligned Length:
- 2198
- Identities:
- 1170
- Gaps:
- 950
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGTCGTGAACGTGCTGCCGCCTATCAGTCACTCAGTCGCCTGGAGTCGGAGTTGCTATTTCTAGGCTTGTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGTTGGGTTCGGGCCCCCAGGTAAATAGCCACAGAAGGCTACCAAACAAGATAAATAATTGTCTCCAAGTAGA 148
Query 1 ---------------ATGAGTGGGCATCGATCAACAAGGAAAAGATGTGGAGATTCTCACCCGGAGTCCCCAGT 59
||||||||||||||.||||||||||||.|||||||||||||||||||.||||||||.||
Sbjct 149 AGAAAACCAAGCTCCATGAGTGGGCATCGGTCAACAAGGAAACGATGTGGAGATTCTCACCCAGAGTCCCCTGT 222
Query 60 GGGCTTCGGGCATATGAGTACTACAGGATGTGTATTAAATAAATTGTTTCAGTTACCAACACCACCATTGTCAA 133
||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||.||||||
Sbjct 223 GGGCTTTGGGCATATGAGTACTACAGGGTGTGTATTAAATAAATTGTTTCAGTTACCGACACCACCACTGTCAA 296
Query 134 GACACCAACTAAAGCGGCTAGAAGAACACAGATATCAAAGTGCTGGACGGTCCCTGCTTGAGCCCTTAATGCAA 207
|||||||..||||.|||||||||||||||||.|||||.|||||||||||||||||.||.|||||||||||||||
Sbjct 297 GACACCAGTTAAAACGGCTAGAAGAACACAGGTATCAGAGTGCTGGACGGTCCCTTCTCGAGCCCTTAATGCAA 370
Query 208 GGGTATTGGGAATGGCTCGTTAGAAGAGTTCCCTCCTGGATTGCCCCAAATCTCATCACCATCATTGGACTGTC 281
||.||.|||||||||||.|||.|||||||.|||||.|||||||||||||||||||||||||||||||||||.||
Sbjct 371 GGATACTGGGAATGGCTAGTTGGAAGAGTACCCTCATGGATTGCCCCAAATCTCATCACCATCATTGGACTATC 444
Query 282 AATAAACATCTGTACAACTATTTTATTAGTCTTCTACTGCCCTACAGCTACAGAGCAGGCACCTCTGTGGGCAT 355
||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 445 AATAAATATCTGTACAACTATTTTGTTAGTCTTCTACTGCCCTACAGCTACAGAGCAGGCACCTCTGTGGGCTT 518
Query 356 ATATTGCTTGTGCCTGTGGCCTTTTCATTTACCAGTCTTTGGATGCTATTGATGGGAAACAGGCAAGAAGAACC 429
|||||||.|||||.||||||||||||||||||||||||.|||||||.||.||||||||||||||.||||||||.
Sbjct 519 ATATTGCCTGTGCTTGTGGCCTTTTCATTTACCAGTCTCTGGATGCCATAGATGGGAAACAGGCCAGAAGAACT 592
Query 430 AATAGTAGTTCTCCTCTGGGAGAACTTTTTGATCATGGCTGTGATTCACTATCAACAGTTTTTGTGGTTCTCGG 503
||.|||||.|||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||.||
Sbjct 593 AACAGTAGCTCTCCTCTGGGAGAACTTTTTGATCATGGCTGTGACTCACTATCGACAGTTTTTGTGGTTCTTGG 666
Query 504 AACTTGTATTGCAGTGCAGCTGGGGACAAACCCTGATTGGATGTTTTTTTGTTGTTTTGCGGGGACATTTATGT 577
|||||||||||||||.||.||.||||||||.|||||.|||||||||||||||||||||||.||||||||.||||
Sbjct 667 AACTTGTATTGCAGTACAACTTGGGACAAATCCTGACTGGATGTTTTTTTGTTGTTTTGCTGGGACATTCATGT 740
Query 578 TCTATTGTGCGCACTGGCAAACGTATGTTTCTGGAACATTGCGATTTGGAAT---------------------- 629
||||||||||.|||||||||||.|||||||||||||||||||||||||||||
Sbjct 741 TCTATTGTGCACACTGGCAAACATATGTTTCTGGAACATTGCGATTTGGAATGCAACTTCATATATCCAGCAAA 814
Query 630 -------------------------------------------------------------------------- 629
Sbjct 815 ATGTAAGATGTCTACCCTCCACCCAGGACAGAACCGATCATCTCTGACACACCTACCTGCTTAGTCCTCTGAGT 888
Query 630 -------------------------------------------AATTGATGTGACTGAAGTGCAAATCTTCATA 660
|||||||||||||||||||||||||||||||
Sbjct 889 CTGCTACTGAGTGTAATTCCCCTATTGGCGTCACCACTCACAGAATTGATGTGACTGAAGTGCAAATCTTCATA 962
Query 661 ATAATCATGCATTTGCTGGCAGTGATTGGAGGACCACCTTTTTGGCAATCTATGATTCCAGTGCTGAATATTCA 734
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.||||||||||
Sbjct 963 ATAATCATGCATTTGCTGGCAGTGATTGGAGGACCACCTTTTTGGCAATCTATGATTCCTGTGTTGAATATTCA 1036
Query 735 AATGAAAATTTTTCCTGCACTTTGTACTGTAGCAGGGACCATATTTTCCTGTACAAATTACTTCCGTGTAATCT 808
|||||||.||.|||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AATGAAACTTCTTCCTGCACTTTGTACTGTGGCAGGGACCATATTTTCCTGTACAAATTACTTCCGTGTAATCT 1110
Query 809 TCACAGGTGGTGTTGGCAAAAATGGATCAACAATAGCAGGAACAAGTGTCCTTTCTCCTTTTCTCCATATTGGA 882
|||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||.|||||||||
Sbjct 1111 TCACAGGTGGTGTTGGCAAAAATGGGTCAACCATAGCAGGAACAAGTGTCCTTTCTCCTTTTCTGCATATTGGA 1184
Query 883 TCAGTGATTACATTAGCTGCAATGATCTACAAGAAATCTGCAGTTCAGCTTTTTGAAAAGCATCCCTGTCTTTA 956
||||||||.||.|||||||..|||||||||||||||||.||||||||||||||||||||||||||.||||||||
Sbjct 1185 TCAGTGATCACGTTAGCTGTTATGATCTACAAGAAATCAGCAGTTCAGCTTTTTGAAAAGCATCCATGTCTTTA 1258
Query 957 TATACTGACATTTGGTTTTGTGTCTGCTAAAATCACTAATAAGCTTGTGGTTGCACACATGACGAAAAGTGAAA 1030
||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1259 TATACTGACATTTGGTTTTGTGTCGGCTAAAATCACTAATAAGCTTGTGGTTGCTCACATGACGAAAAGTGAAA 1332
Query 1031 TGCATTTGCATGACACAGCATTCATAGGTCCGGCACTTTTGTTTCTGGACCAGTATTTTAACAGCTTTATTGAT 1104
|||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||||||||||.||||||
Sbjct 1333 TGCATTTGCATGACACAGCATTCATAGGTCCAGCACTTCTGTTTCTGGACCAGTATTTTAACAGCTTCATTGAT 1406
Query 1105 GAATATATTGTACTTTGGATTGCCCTGGTTTTCTCTTTCTTTGATTTGATCCGCTACTGTGTCAGTGTTTGCAA 1178
||||||||.|||||||||||||||.||.|.||||||||||||||||||||.||.||||||||||||||||||||
Sbjct 1407 GAATATATAGTACTTTGGATTGCCTTGATCTTCTCTTTCTTTGATTTGATTCGTTACTGTGTCAGTGTTTGCAA 1480
Query 1179 TCAGATTGCGTCTCACCTGCACATACATGTCTTCAGAATCAAGGTCTCTACAGCTCATTCTAATCATCAT---- 1248
|||||||||.|||||||||||.|||||||||||||||||.||.|.||||||||||||.|||||||||||.
Sbjct 1481 TCAGATTGCATCTCACCTGCATATACATGTCTTCAGAATTAAAGCCTCTACAGCTCACTCTAATCATCACTAAG 1554
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1555 GATGTGTCTGGGTTCTACTAAGCTCATGGTTCCTGCAAGAAGGAATTCGAACATATTAAGGACAACAGGGGTGG 1628
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1629 ATAAGAACAAATATAATTTATAATAATCAATGTCATATAACTTTCATTCTTTGTTACTGGTAACACTCCCTAAC 1702
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1703 TGTCCTGTTTAGAATGGGAATTTCAGGCCCCATCCTATAAACTGAATATGTTGTCAAACAGGGTTTGGCTCCAG 1776
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1777 AAAGCATGCAGGGAAACTACCGAGTGTTTGTGATTATTCAGAATATCACTATCATAGGAGCACATCCCCACTGG 1850
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1851 TGGTAAATCTAATGTAAAATTTTTGCAGGCCAAAAGATTGTTGCTTTATGATTTTAACAAATCATCATCTTTTC 1924
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1925 GTAACACCTTGTTTATTGTCTTCTCAGATGTTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACTAG 1998
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1999 CTTGTGAGGTGAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTTGAGGAAG 2072
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 2073 TGATTTTATTATCAATCAAGAAATGGTGTTTCTCACGGGCTTGGGAAATCTTGATAGCATGCAGATAATGTGGT 2146
Query 1249 ---------------------------------------------------- 1248
Sbjct 2147 AACTTTGTCAATCCATTTTATTTTTTTAAATAAATATATGATCTCAGAACCA 2198
