Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07648
- Subject:
- NM_001011515.2
- Aligned Length:
- 1821
- Identities:
- 658
- Gaps:
- 1152
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGGGAGA 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAA------- 289
Query 297 ACCTAAAGAAGTAGTTAAACCTGTGCCCATTACATCTCCTGCTGTGTCCAAAGTCACTTCCACAAACAACATGG 370
Sbjct 290 -------------------------------------------------------------------------- 289
Query 371 CCTACAATAAGGCACCACGGCCTTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT 444
Sbjct 290 -------------------------------------------------------------------------- 289
Query 445 GCCTTCACCCCAGCCCATGCGACCACCTCATCACATGCTTCCCCTTCACCCGTGGCTGCCGTCACTCCTCCCCT 518
Sbjct 290 -------------------------------------------------------------------------- 289
Query 519 GTTCGCTGCATCTGGACTGCATGCTAATGCCAATCTTAGTGCTGACCAGTCTCCATCTGCACTGAGCGCTGGTA 592
Sbjct 290 -------------------------------------------------------------------------- 289
Query 593 AAACTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAG 666
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 290 ------------------------AGCCCACAGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAG 339
Query 667 GGACAGAGAAGAGGATCCCAGGGTGACAGTAAACAGCAAAATG------------------GCCCACCAAGAAA 722
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 340 GGACAGAGAAGAGGATCCCAGGGTGACAGTAAACAGCAAAATGGGAAAATCCCACCTAAACGCCCACCAAGAAA 413
Query 723 ACACATTGTGGAGCGCTATACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTG 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 414 ACACATTGTGGAGCGCTATACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTG 487
Query 797 AGGATACTGAAGACTGGCGTCCAAGGACTGGAACAACTCAGTCTCGCTCTTTCCGAATCCTTGCCCAGATCACT 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 488 AGGATACTGAAGACTGGCGTCCAAGGACTGGAACAACTCAGTCTCGCTCTTTCCGAATCCTTGCCCAGATCACT 561
Query 871 GGGACTGAACATTTGAAAGAATCTGAAGCCGATAATACAAAGAAGGCAAATAACTCTCAGGAGCCTTCTCCGCA 944
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 562 GGGACTGAACATTTGAAAGAATCTGAAGCCGATAATACAAAGAAGGCAAA------------------------ 611
Query 945 GTTGGCTTCCTCGGTAGCTTCCACACGGAGCATGCCCGAGAGCCTGGACAGCCCAACCTCTGGCAGACCAGGGG 1018
|||.| |||
Sbjct 612 ---------------------------------------------GGAAA--------------AGA------- 619
Query 1019 TTACCAGCCTCACAACTGCAGCTGCCTTCAAGCCTGTAGGATCCACTGGCGTCATCAAGT-CACCAA------- 1084
|||| ||||||.|.||.||| ||| |||.| |||.||
Sbjct 620 -TACC-------------------CCTTCACGTCTTTAG--TCC-----------CAAATACACAAAATTACGT 660
Query 1085 -GCTGGCAACGGCCAAACCAAGGAGTACCTTC--CAC-TGGAAGAATCTCAA---ACAGCGCTGCTTACTCAGG 1151
.||||| ||||.|.||| ||| ||| || .|||.|| ||||
Sbjct 661 GACTGGC---------ACCATGAAGT---TTCAGCACGTG-----CTCTTAACGTACAG--------------- 702
Query 1152 ATCAGTGGCACCAGCCAACTCAGCTTTGGGACAAACCCAGCCAAGTGACCAGGACACTTTAGTGCAAAGAGCTG 1225
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1226 AGCACATTCCAGCAGGGAAACGAACTCCGATGTGCGCCCATTGTAACCAGGTCATCAGAGGACCATTCTTAGTG 1299
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1300 GCACTGGGGAAATCTTGGCACCCAGAAGAATTCAACTGCGCTCACTGCAAAAATACAATGGCCTACATTGGATT 1373
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1374 TGTAGAGGAGAAAGGAGCCCTGTATTGTGAGCTGTGCTATGAGAAATTCTTTGCCCCTGAATGTGGTCGATGCC 1447
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1448 AAAGGAAGATCCTTGGAGAAGTCATCAATGCGTTGAAACAAACTTGGCATGTTTCCTGTTTTGTGTGTGTAGCC 1521
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1522 TGTGGAAAGCCCATTCGGAACAATGTTTTTCACTTGGAGGATGGTGAACCCTACTGTGAGACTGATTATTATGC 1595
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1596 CCTCTTTGGTACTATATGCCATGGATGTGAATTTCCCATAGAAGCTGGTGACATGTTCCTGGAAGCTCTGGGCT 1669
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1670 ACACCTGGCATGACACTTGCTTTGTATGCTCAGTGTGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCCAAG 1743
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1744 AAGGACAAGCCCCTGTGTAAGAAACATGCTCATTCTGTGAATTTT 1788
Sbjct 703 --------------------------------------------- 702
