Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07648
- Subject:
- NM_001190857.1
- Aligned Length:
- 1821
- Identities:
- 598
- Gaps:
- 1152
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
|||||||||||||||||||||.||||.||||||||||||||||||||||||||.||.||.||.|||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||.||.|||||.|||||||||.|.||||||.||||.||||||||.||.||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||.|||||.||.|.||||||.||||||||.|||||||||||||||||.||||||||||.||||||.
Sbjct 149 TTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACG 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGGGAGA 296
|||||.||||||||||||||.||||||||.||.||||||.|||||..||||||||||
Sbjct 223 GGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTT----------------- 279
Query 297 ACCTAAAGAAGTAGTTAAACCTGTGCCCATTACATCTCCTGCTGTGTCCAAAGTCACTTCCACAAACAACATGG 370
||| |||||
Sbjct 280 ------------------------------------TCC------GTCCA------------------------ 287
Query 371 CCTACAATAAGGCACCACGGCCTTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT 444
Sbjct 288 -------------------------------------------------------------------------- 287
Query 445 GCCTTCACCCCAGCCCATGCGACCACCTCATCACATGCTTCCCCTTCACCCGTGGCTGCCGTCACTCCTCCCCT 518
Sbjct 288 -------------------------------------------------------------------------- 287
Query 519 GTTCGCTGCATCTGGACTGCATGCTAATGCCAATCTTAGTGCTGACCAGTCTCCATCTGCACTGAGCGCTGGTA 592
Sbjct 288 -------------------------------------------------------------------------- 287
Query 593 AAACTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAG 666
|.|||||||||||||||||||||||||||||.||.|||||||||||||||||
Sbjct 288 ----------------------GAAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAG 339
Query 667 GGACAGAGAAGAGGATCCCAGGGTGACAGTAAACAGCAAAATG------------------GCCCACCAAGAAA 722
||||||||||||||||||||||||||||.|||.|||||||||| |||||||||||||
Sbjct 340 GGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGGAAAATTCCACCTAAACGCCCACCAAGAAA 413
Query 723 ACACATTGTGGAGCGCTATACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTG 796
||||||||||||||||.|.||.|||||||||||..||||||||||||||||||||||||||||..|.|||||||
Sbjct 414 ACACATTGTGGAGCGCAACACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCAAGAAACGGCTGATTG 487
Query 797 AGGATACTGAAGACTGGCGTCCAAGGACTGGAACAACTCAGTCTCGCTCTTTCCGAATCCTTGCCCAGATCACT 870
||||.|||||.||||||||.||..||||||||||.|||||||||||.||||||||.||||||||||||||||||
Sbjct 488 AGGACACTGAGGACTGGCGCCCCCGGACTGGAACGACTCAGTCTCGTTCTTTCCGGATCCTTGCCCAGATCACT 561
Query 871 GGGACTGAACATTTGAAAGAATCTGAAGCCGATAATACAAAGAAGGCAAATAACTCTCAGGAGCCTTCTCCGCA 944
||||||||.|||.|||.||||||||||...||.|||||.|||||||||||
Sbjct 562 GGGACTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAA------------------------ 611
Query 945 GTTGGCTTCCTCGGTAGCTTCCACACGGAGCATGCCCGAGAGCCTGGACAGCCCAACCTCTGGCAGACCAGGGG 1018
|||.| |||
Sbjct 612 ---------------------------------------------GGAAA--------------AGA------- 619
Query 1019 TTACCAGCCTCACAACTGCAGCTGCCTTCAAGCCTGTAGGATCCACTGGCGTCATCAAGT-CACCAA------- 1084
|||| ||||||.|.||.||| ||| |||.| |||.||
Sbjct 620 -TACC-------------------CCTTCACGTCTTTAG--TCC-----------CAAATACACAAAATTACGT 660
Query 1085 -GCTGGCAACGGCCAAACCAAGGAGTACCTTC--CAC-TGGAAGAATCTCAA---ACAGCGCTGCTTACTCAGG 1151
.||||| ||||.|.||| ||| ||| || .|||.|| ||||
Sbjct 661 GACTGGC---------ACCATGAAGT---TTCAGCACGTG-----CTCTTAATGTACAG--------------- 702
Query 1152 ATCAGTGGCACCAGCCAACTCAGCTTTGGGACAAACCCAGCCAAGTGACCAGGACACTTTAGTGCAAAGAGCTG 1225
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1226 AGCACATTCCAGCAGGGAAACGAACTCCGATGTGCGCCCATTGTAACCAGGTCATCAGAGGACCATTCTTAGTG 1299
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1300 GCACTGGGGAAATCTTGGCACCCAGAAGAATTCAACTGCGCTCACTGCAAAAATACAATGGCCTACATTGGATT 1373
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1374 TGTAGAGGAGAAAGGAGCCCTGTATTGTGAGCTGTGCTATGAGAAATTCTTTGCCCCTGAATGTGGTCGATGCC 1447
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1448 AAAGGAAGATCCTTGGAGAAGTCATCAATGCGTTGAAACAAACTTGGCATGTTTCCTGTTTTGTGTGTGTAGCC 1521
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1522 TGTGGAAAGCCCATTCGGAACAATGTTTTTCACTTGGAGGATGGTGAACCCTACTGTGAGACTGATTATTATGC 1595
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1596 CCTCTTTGGTACTATATGCCATGGATGTGAATTTCCCATAGAAGCTGGTGACATGTTCCTGGAAGCTCTGGGCT 1669
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1670 ACACCTGGCATGACACTTGCTTTGTATGCTCAGTGTGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCCAAG 1743
Sbjct 703 -------------------------------------------------------------------------- 702
Query 1744 AAGGACAAGCCCCTGTGTAAGAAACATGCTCATTCTGTGAATTTT 1788
Sbjct 703 --------------------------------------------- 702
