Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07648
- Subject:
- NM_019809.3
- Aligned Length:
- 1803
- Identities:
- 888
- Gaps:
- 807
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
|||||||||||||||||||||.||||.||||||||||||||||||||||||||.||.||.||.|||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||.||.|||||.|||||||||.|.||||||.||||.||||||||.||.||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||.|||||.||.|.||||||.||||||||.|||||||||||||||||.||||||||||.||||||.
Sbjct 149 TTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACG 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGGGAGA 296
|||||.||||||||||||||.||||||||.||.||||||.|||||..||||||||||.|.||.||.|||||.||
Sbjct 223 GGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGGGTGA 296
Query 297 ACCTAAAGAAGTAGTTAAACCTGTGCCCATTACATCTCCTGCTGTGTCCAAAGTCACTTCCACAAACAACATGG 370
||||||.|||||||||||.||||||||||||||||||||||||||.|||||||||||||||||.|.||||||||
Sbjct 297 ACCTAAGGAAGTAGTTAAGCCTGTGCCCATTACATCTCCTGCTGTATCCAAAGTCACTTCCACTACCAACATGG 370
Query 371 CCTACAATAAGGCACCACGGCCTTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT 444
||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCTACAATAAAGCACCACGGCCCTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT 444
Query 445 GCCTTCACCCCAGCCCATGCGACCACCTCATCACATGCTTCCCCTTCACCCGTGGCTGCCGTCACTCCTCCCCT 518
||.|||||||||||||||||..||||.|||||||||||||||||..||||.|||||.||.|.||||||.|.||.
Sbjct 445 GCGTTCACCCCAGCCCATGCCGCCACTTCATCACATGCTTCCCCCACACCTGTGGCCGCTGCCACTCCCCTCCA 518
Query 519 GTTCGCTGCATCTGGACTGCATGCTAATGCCAATCTTAGTGCTGACCAGTCTCCATCTGCACTGAGCGCTGGTA 592
..||.|||||||.||||||||||.||.|||||||||||||||||||||||.|.|||||.|||.||.|.||||||
Sbjct 519 CCTCTCTGCATCCGGACTGCATGTTAGTGCCAATCTTAGTGCTGACCAGTGTTCATCTCCACCGAACACTGGTA 592
Query 593 AAACTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAG 666
||.||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||
Sbjct 593 AACCTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAG 666
Query 667 GGACAGAGAAGAGGATCCCAGGGTGACAGTAAACAGCAAAATGGCCCACCAAGAAAACACATTGTGGAGCGCTA 740
||||||||||||||||||||||||||||.|||.|||||||||||||||||||||||||||||||||||||||.|
Sbjct 667 GGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGCCCACCAAGAAAACACATTGTGGAGCGCAA 740
Query 741 TACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGC 814
.||.|||||||||||..||||||||||||||||||||||||||||..|.|||||||||||.|||||.|||||||
Sbjct 741 CACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCAAGAAACGGCTGATTGAGGACACTGAGGACTGGC 814
Query 815 GTCCAAGGACTGGAACAACTCAGTCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTTGAAA 888
|.||..||||||||||.|||||||||||.||||||||.||||||||||||||||||||||||||.|||.|||.|
Sbjct 815 GCCCCCGGACTGGAACGACTCAGTCTCGTTCTTTCCGGATCCTTGCCCAGATCACTGGGACTGAGCATCTGACA 888
Query 889 GAATCTGAAGCCGATAATACAAAGAAGGCAAATAACTCTCAGGAGCCTTCTCCGCAGTTGGCTTCCTCGGTAGC 962
|||||||||...||.|||||.|||||||||||
Sbjct 889 GAATCTGAAAATGACAATACGAAGAAGGCAAA------------------------------------------ 920
Query 963 TTCCACACGGAGCATGCCCGAGAGCCTGGACAGCCCAACCTCTGGCAGACCAGGGGTTACCAGCCTCACAACTG 1036
|||.| ||| ||||
Sbjct 921 ---------------------------GGAAA--------------AGA--------TACC------------- 932
Query 1037 CAGCTGCCTTCAAGCCTGTAGGATCCACTGGCGTCATCAAGT-CACCAA--------GCTGGCAACGGCCAAAC 1101
||||||.|.||.||| ||| |||.| |||.|| .||||| ||
Sbjct 933 ------CCTTCACGTCTTTAG--TCC-----------CAAATACACAAAATTACGTGACTGGC---------AC 978
Query 1102 CAAGGAGTACCTTC--CAC-TGGAAGAATCTCAA---ACAGCGCTGCTTACTCAGGATCAGTGGCACCAGCCAA 1169
||.|.||| ||| ||| || .|||.|| ||||
Sbjct 979 CATGAAGT---TTCAGCACGTG-----CTCTTAATGTACAG--------------------------------- 1011
Query 1170 CTCAGCTTTGGGACAAACCCAGCCAAGTGACCAGGACACTTTAGTGCAAAGAGCTGAGCACATTCCAGCAGGGA 1243
Sbjct 1012 -------------------------------------------------------------------------- 1011
Query 1244 AACGAACTCCGATGTGCGCCCATTGTAACCAGGTCATCAGAGGACCATTCTTAGTGGCACTGGGGAAATCTTGG 1317
Sbjct 1012 -------------------------------------------------------------------------- 1011
Query 1318 CACCCAGAAGAATTCAACTGCGCTCACTGCAAAAATACAATGGCCTACATTGGATTTGTAGAGGAGAAAGGAGC 1391
Sbjct 1012 -------------------------------------------------------------------------- 1011
Query 1392 CCTGTATTGTGAGCTGTGCTATGAGAAATTCTTTGCCCCTGAATGTGGTCGATGCCAAAGGAAGATCCTTGGAG 1465
Sbjct 1012 -------------------------------------------------------------------------- 1011
Query 1466 AAGTCATCAATGCGTTGAAACAAACTTGGCATGTTTCCTGTTTTGTGTGTGTAGCCTGTGGAAAGCCCATTCGG 1539
Sbjct 1012 -------------------------------------------------------------------------- 1011
Query 1540 AACAATGTTTTTCACTTGGAGGATGGTGAACCCTACTGTGAGACTGATTATTATGCCCTCTTTGGTACTATATG 1613
Sbjct 1012 -------------------------------------------------------------------------- 1011
Query 1614 CCATGGATGTGAATTTCCCATAGAAGCTGGTGACATGTTCCTGGAAGCTCTGGGCTACACCTGGCATGACACTT 1687
Sbjct 1012 -------------------------------------------------------------------------- 1011
Query 1688 GCTTTGTATGCTCAGTGTGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCCAAGAAGGACAAGCCCCTGTGT 1761
Sbjct 1012 -------------------------------------------------------------------------- 1011
Query 1762 AAGAAACATGCTCATTCTGTGAATTTT 1788
Sbjct 1012 --------------------------- 1011
