Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07648
Subject:
NM_019809.3
Aligned Length:
1803
Identities:
888
Gaps:
807

Alignment

Query    1  ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA  74
            |||||||||||||||||||||.||||.||||||||||||||||||||||||||.||.||.||.|||||||||||
Sbjct    1  ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAA  74

Query   75  CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG  148
            ||||||||||||||||||||||||.||.|||||.|||||||||.|.||||||.||||.||||||||.||.||||
Sbjct   75  CATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGG  148

Query  149  TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA  222
            ||||||||||.|||||.||.|.||||||.||||||||.|||||||||||||||||.||||||||||.||||||.
Sbjct  149  TTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACG  222

Query  223  GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGGGAGA  296
            |||||.||||||||||||||.||||||||.||.||||||.|||||..||||||||||.|.||.||.|||||.||
Sbjct  223  GGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGGGTGA  296

Query  297  ACCTAAAGAAGTAGTTAAACCTGTGCCCATTACATCTCCTGCTGTGTCCAAAGTCACTTCCACAAACAACATGG  370
            ||||||.|||||||||||.||||||||||||||||||||||||||.|||||||||||||||||.|.||||||||
Sbjct  297  ACCTAAGGAAGTAGTTAAGCCTGTGCCCATTACATCTCCTGCTGTATCCAAAGTCACTTCCACTACCAACATGG  370

Query  371  CCTACAATAAGGCACCACGGCCTTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT  444
            ||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCTACAATAAAGCACCACGGCCCTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT  444

Query  445  GCCTTCACCCCAGCCCATGCGACCACCTCATCACATGCTTCCCCTTCACCCGTGGCTGCCGTCACTCCTCCCCT  518
            ||.|||||||||||||||||..||||.|||||||||||||||||..||||.|||||.||.|.||||||.|.||.
Sbjct  445  GCGTTCACCCCAGCCCATGCCGCCACTTCATCACATGCTTCCCCCACACCTGTGGCCGCTGCCACTCCCCTCCA  518

Query  519  GTTCGCTGCATCTGGACTGCATGCTAATGCCAATCTTAGTGCTGACCAGTCTCCATCTGCACTGAGCGCTGGTA  592
            ..||.|||||||.||||||||||.||.|||||||||||||||||||||||.|.|||||.|||.||.|.||||||
Sbjct  519  CCTCTCTGCATCCGGACTGCATGTTAGTGCCAATCTTAGTGCTGACCAGTGTTCATCTCCACCGAACACTGGTA  592

Query  593  AAACTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAG  666
            ||.||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||
Sbjct  593  AACCTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAG  666

Query  667  GGACAGAGAAGAGGATCCCAGGGTGACAGTAAACAGCAAAATGGCCCACCAAGAAAACACATTGTGGAGCGCTA  740
            ||||||||||||||||||||||||||||.|||.|||||||||||||||||||||||||||||||||||||||.|
Sbjct  667  GGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGCCCACCAAGAAAACACATTGTGGAGCGCAA  740

Query  741  TACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGC  814
            .||.|||||||||||..||||||||||||||||||||||||||||..|.|||||||||||.|||||.|||||||
Sbjct  741  CACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCAAGAAACGGCTGATTGAGGACACTGAGGACTGGC  814

Query  815  GTCCAAGGACTGGAACAACTCAGTCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTTGAAA  888
            |.||..||||||||||.|||||||||||.||||||||.||||||||||||||||||||||||||.|||.|||.|
Sbjct  815  GCCCCCGGACTGGAACGACTCAGTCTCGTTCTTTCCGGATCCTTGCCCAGATCACTGGGACTGAGCATCTGACA  888

Query  889  GAATCTGAAGCCGATAATACAAAGAAGGCAAATAACTCTCAGGAGCCTTCTCCGCAGTTGGCTTCCTCGGTAGC  962
            |||||||||...||.|||||.|||||||||||                                          
Sbjct  889  GAATCTGAAAATGACAATACGAAGAAGGCAAA------------------------------------------  920

Query  963  TTCCACACGGAGCATGCCCGAGAGCCTGGACAGCCCAACCTCTGGCAGACCAGGGGTTACCAGCCTCACAACTG  1036
                                       |||.|              |||        ||||             
Sbjct  921  ---------------------------GGAAA--------------AGA--------TACC-------------  932

Query 1037  CAGCTGCCTTCAAGCCTGTAGGATCCACTGGCGTCATCAAGT-CACCAA--------GCTGGCAACGGCCAAAC  1101
                  ||||||.|.||.|||  |||           |||.| |||.||        .|||||         ||
Sbjct  933  ------CCTTCACGTCTTTAG--TCC-----------CAAATACACAAAATTACGTGACTGGC---------AC  978

Query 1102  CAAGGAGTACCTTC--CAC-TGGAAGAATCTCAA---ACAGCGCTGCTTACTCAGGATCAGTGGCACCAGCCAA  1169
            ||.|.|||   |||  ||| ||     .|||.||   ||||                                 
Sbjct  979  CATGAAGT---TTCAGCACGTG-----CTCTTAATGTACAG---------------------------------  1011

Query 1170  CTCAGCTTTGGGACAAACCCAGCCAAGTGACCAGGACACTTTAGTGCAAAGAGCTGAGCACATTCCAGCAGGGA  1243
                                                                                      
Sbjct 1012  --------------------------------------------------------------------------  1011

Query 1244  AACGAACTCCGATGTGCGCCCATTGTAACCAGGTCATCAGAGGACCATTCTTAGTGGCACTGGGGAAATCTTGG  1317
                                                                                      
Sbjct 1012  --------------------------------------------------------------------------  1011

Query 1318  CACCCAGAAGAATTCAACTGCGCTCACTGCAAAAATACAATGGCCTACATTGGATTTGTAGAGGAGAAAGGAGC  1391
                                                                                      
Sbjct 1012  --------------------------------------------------------------------------  1011

Query 1392  CCTGTATTGTGAGCTGTGCTATGAGAAATTCTTTGCCCCTGAATGTGGTCGATGCCAAAGGAAGATCCTTGGAG  1465
                                                                                      
Sbjct 1012  --------------------------------------------------------------------------  1011

Query 1466  AAGTCATCAATGCGTTGAAACAAACTTGGCATGTTTCCTGTTTTGTGTGTGTAGCCTGTGGAAAGCCCATTCGG  1539
                                                                                      
Sbjct 1012  --------------------------------------------------------------------------  1011

Query 1540  AACAATGTTTTTCACTTGGAGGATGGTGAACCCTACTGTGAGACTGATTATTATGCCCTCTTTGGTACTATATG  1613
                                                                                      
Sbjct 1012  --------------------------------------------------------------------------  1011

Query 1614  CCATGGATGTGAATTTCCCATAGAAGCTGGTGACATGTTCCTGGAAGCTCTGGGCTACACCTGGCATGACACTT  1687
                                                                                      
Sbjct 1012  --------------------------------------------------------------------------  1011

Query 1688  GCTTTGTATGCTCAGTGTGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCCAAGAAGGACAAGCCCCTGTGT  1761
                                                                                      
Sbjct 1012  --------------------------------------------------------------------------  1011

Query 1762  AAGAAACATGCTCATTCTGTGAATTTT  1788
                                       
Sbjct 1012  ---------------------------  1011

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