Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07648
- Subject:
- XM_006501745.1
- Aligned Length:
- 2204
- Identities:
- 1267
- Gaps:
- 760
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
|||||||||||||||||||||.||||.||||||||||||||||||||||||||.||.||.||.|||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||.||.|||||.|||||||||.|.||||||.||||.||||||||.||.||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||.|||||.||.|.||||||.||||||||.|||||||||||||||||.||||||||||.||||||.
Sbjct 149 TTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACG 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGGGAGA 296
|||||.||||||||||||||.||||||||.||.||||||.|||||..||||||||||
Sbjct 223 GGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTT----------------- 279
Query 297 ACCTAAAGAAGTAGTTAAACCTGTGCCCATTACATCTCCTGCTGTGTCCAAAGTCACTTCCACAAACAACATGG 370
||| |||||
Sbjct 280 ------------------------------------TCC------GTCCA------------------------ 287
Query 371 CCTACAATAAGGCACCACGGCCTTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT 444
Sbjct 288 -------------------------------------------------------------------------- 287
Query 445 GCCTTCACCCCAGCCCATGCGACCACCTCATCACATGCTTCCCCTTCACCCGTGGCTGCCGTCACTCCTCCCCT 518
Sbjct 288 -------------------------------------------------------------------------- 287
Query 519 GTTCGCTGCATCTGGACTGCATGCTAATGCCAATCTTAGTGCTGACCAGTCTCCATCTGCACTGAGCGCTGGTA 592
Sbjct 288 -------------------------------------------------------------------------- 287
Query 593 AAACTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAG 666
|.|||||||||||||||||||||||||||||.||.|||||||||||||||||
Sbjct 288 ----------------------GAAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAG 339
Query 667 GGACAGAGAAGAGGATCCCAGGGTGACAGTAAACAGCAAAATG------------------GCCCACCAAGAAA 722
||||||||||||||||||||||||||||.|||.|||||||||| |||||||||||||
Sbjct 340 GGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGGAAAATTCCACCTAAACGCCCACCAAGAAA 413
Query 723 ACACATTGTGGAGCGCTATACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTG 796
||||||||||||||||.|.||.|||||||||||..||||||||||||||||||||||||||||..|.|||||||
Sbjct 414 ACACATTGTGGAGCGCAACACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCAAGAAACGGCTGATTG 487
Query 797 AGGATACTGAAGACTGGCGTCCAAGGACTGGAACAACTCAGTCTCGCTCTTTCCGAATCCTTGCCCAGATCACT 870
||||.|||||.||||||||.||..||||||||||.|||||||||||.||||||||.||||||||||||||||||
Sbjct 488 AGGACACTGAGGACTGGCGCCCCCGGACTGGAACGACTCAGTCTCGTTCTTTCCGGATCCTTGCCCAGATCACT 561
Query 871 GGGACTGAACATTTGAAAGAATCTGAAGCCGATAATACAAAGAAGGCAAA---TAAC---TCTCAGGA-----G 933
||||||||.|||.|||.||||||||||...||.|||||.||||||||||| |.|| ||||.||| .
Sbjct 562 GGGACTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAAGTTTTACAGTTCTCTGGAAGACCC 635
Query 934 CCTT-------------------------CTCCGCAG------------------------------------- 945
|||| ||||.|||
Sbjct 636 CCTTAAGAACGGACCACACCCACCTGCAGCTCCCCAGCTGTTAAAAGTTCATAGTCAAGTAGCCATAGTTTCTA 709
Query 946 --------------------------------------------------------TTGG-------------- 949
||||
Sbjct 710 AGGAAGCAGCCACTTACTCTAGTGTAAGCAGGTCTACAAGAACTGTAGAAGGTGCTTTGGAAGGCTTTGGAAAC 783
Query 950 --------CTTC----------CTCGGTA-------------------------GCTTCCAC------------ 968
|||| ||.|.|| |||.||||
Sbjct 784 TTTCCTGCCTTCTCCCCTCCTACTAGATACAGTGCTGTAGTCGTCAGTGATGCGGCTGCCACTGTGTCTGCTGC 857
Query 969 -------------AC--GGAGCAT--GCCC-GAGAGC------------CTGGA------------CAG----- 995
|| ||..|.| |||| ||.|.| ||||| |||
Sbjct 858 TCTCGCTGCGAAAACCAGGCTCTTCGGCCCTGAAAACTCCCAGTCTCTTCTGGATGCACTGTGCATCAGCACTG 931
Query 996 --CCCAA--------------------------CCTCTG---------------------------------GC 1008
||||| |||||| ||
Sbjct 932 TCCCCAAGCCTCTAGCTCTTTCCTGTCTTCAGTCCTCTGAGGAGTCGAGTGGCTCTGTCCACGTTAAGAAGAGC 1005
Query 1009 AG-----ACCAGGGG--TT-------ACCAGCCTCA----------CAACT----------------------- 1035
|| .|||||.| || |||.||.||| ||.||
Sbjct 1006 AGTAGCACCCAGGAGCCTTCTCAGCAACCGGCGTCATCTGGAGCTTCACCTCTGAGCGCGTCTGAGGGCCCCGA 1079
Query 1036 -------------------------------------------GCAGCTGCCTTCAAGCCTGTAGGATCCACTG 1066
||.|||||.||||||||||||||||||||..
Sbjct 1080 GAGCCCAGGTTCCAGCAGGCCCTCGGTGGCTGGCCTCCGCTCCGCTGCTGCTTTCAAGCCTGTAGGATCCACCA 1153
Query 1067 GCGTCATCAAGTCACCAAGCTGGCAACGGCCAAACCAAGGAGTACCTTCCACTGGAAGAATCTCAAACAGCGCT 1140
||| ||||||||||.||||||||.||.||||||||||.||.||||||.|||||.|||||.|||||||..||.
Sbjct 1154 GCG---TCAAGTCACCTAGCTGGCAGCGTCCAAACCAAGCAGCACCTTCTACTGGGAGAATTTCAAACAATGCA 1224
Query 1141 GCTTACTCAGGATCAGTGGCACCAGCCAACTCAG-CTTTGGGACAAACCCAGCCAAGTGACCAGGACACTTTAG 1213
..||..|||||..|||.||| | ||.||||.|...||||||||||||||||.|||||..|.|
Sbjct 1225 CGTTCTTCAGGTACAGGGGC-------------GTCTGTGGGGCCTCCCCAGCCAAGTGACCAAGACACACTTG 1285
Query 1214 TGCAAAGAGCTGAGCACATTCCAGCAGGGAAACGAACTCCGATGTGCGCCCATTGTAACCAGGTCATCAGAGGA 1287
||||.|||||.||.|||||||||||.||.||.||.||.||.|||||.|||||.||.|||||.||.|||||.|||
Sbjct 1286 TGCAGAGAGCGGAACACATTCCAGCGGGCAAGCGGACCCCCATGTGTGCCCACTGCAACCAAGTTATCAGGGGA 1359
Query 1288 CC-ATTCTTAGTGGCACTGGGGAAATCTTGGCACCCAGAAGAATTCAACTGCGCTCACTGCAAAAATACAATGG 1360
|| .||||| |||||.||||||||.||.|||||.|||||||||||.|||||.|||||.||||||||.|||||||
Sbjct 1360 CCTTTTCTT-GTGGCTCTGGGGAAGTCCTGGCATCCAGAAGAATTTAACTGTGCTCATTGCAAAAACACAATGG 1432
Query 1361 CCTACATTGGATTTGTAGAGGAGAAAGGAGCCCTGTATTGTGAGCTGTGCTATGAGAAATTCTTTGCCCCTGAA 1434
|||||||.||.||||||||||||||.|||||.|||||.||||||||.|||||||||||.||||||||.||||||
Sbjct 1433 CCTACATAGGCTTTGTAGAGGAGAAGGGAGCACTGTACTGTGAGCTATGCTATGAGAAGTTCTTTGCTCCTGAA 1506
Query 1435 TGTGGTCGATGCCAAAGGAAGATCCTTGGAGAAGTCATCAATGCGTTGAAACAAACTTGGCATGTTTCCTGTTT 1508
|||||.||.|||||||||||||||||||||||||||||||||||.|||||.||.||.||||||||.||||||||
Sbjct 1507 TGTGGCCGGTGCCAAAGGAAGATCCTTGGAGAAGTCATCAATGCTTTGAAGCAGACCTGGCATGTGTCCTGTTT 1580
Query 1509 TGTGTGTGTAGCCTGTGGAAAGCCCATTCGGAACAATGTTTTTCACTTGGAGGATGGTGAACCCTACTGTGAGA 1582
|||||||||.|||||||||||.||||||||.||.||||||||.||||||||.|||||.||.|||||||||||||
Sbjct 1581 TGTGTGTGTGGCCTGTGGAAAACCCATTCGTAATAATGTTTTCCACTTGGAAGATGGCGAGCCCTACTGTGAGA 1654
Query 1583 CTGATTATTATGCCCTCTTTGGTACTATATGCCATGGATGTGAATTTCCCATAGAAGCTGGTGACATGTTCCTG 1656
|.||.||.||.|||||.|||||.||.|||||.|.||||||||||||.||||||||.||||||||||||||||||
Sbjct 1655 CAGACTACTACGCCCTTTTTGGAACAATATGTCGTGGATGTGAATTCCCCATAGAGGCTGGTGACATGTTCCTG 1728
Query 1657 GAAGCTCTGGGCTACACCTGGCATGACACTTGCTTTGTATGCTCAGTGTGTTGTGAAAGTTTGGAAGGTCAGAC 1730
|||||||||||.|||||.||||||||.|||||||||||.|||||.|||||||||||||||||||||||.|||||
Sbjct 1729 GAAGCTCTGGGATACACTTGGCATGATACTTGCTTTGTGTGCTCTGTGTGTTGTGAAAGTTTGGAAGGGCAGAC 1802
Query 1731 CTTTTTCTCCAAGAAGGACAAGCCCCTGTGTAAGAAACATGCTCATTCTGTGAATTTT 1788
.|||||||||||||||||||||||.||.||.||.||||||||||||||||||||||||
Sbjct 1803 ATTTTTCTCCAAGAAGGACAAGCCACTTTGCAAAAAACATGCTCATTCTGTGAATTTT 1860
