Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07649
- Subject:
- NM_001256426.1
- Aligned Length:
- 1892
- Identities:
- 601
- Gaps:
- 1267
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGAAAAC 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||...||
Sbjct 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGCCCAC 296
Query 297 A--CA------------------------------------AGTGACAAATAA------CCCTGG--------- 317
| || ||.||||.|.|| |||.||
Sbjct 297 AGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAGGGACAGAGAAGAGGATCCCAGGGTGACAGTA 370
Query 318 -------CACTGTGAAAATCCCACCTAAACGCCCACCAAGAAAACACATTGTGGAGCGCTATACAGAGTTTTAT 384
.|.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AACAGCAAAATGGGAAAATCCCACCTAAACGCCCACCAAGAAAACACATTGTGGAGCGCTATACAGAGTTTTAT 444
Query 385 CATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCAAGGACTGG 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCAAGGACTGG 518
Query 459 AACAACTCAATCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTTGAAAGAATCTGAAGCCG 532
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AACAACTCAGTCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTTGAAAGAATCTGAAGCCG 592
Query 533 ATAATACAAAGAAGGCAAA---------------GGAAAAGATACC----------CCT--------------- 566
||||||||||||||||||| ||||.|..|||| |||
Sbjct 593 ATAATACAAAGAAGGCAAAGTTTGACAGTGCTCTGGAAGACCTACCTAAGAGTGGACCTCACCCTCCTGCAACT 666
Query 567 --TCACGTCTT---------TAGTCCCAAAT----ACA----CAAAATTACGTGACTGGCACCATGA----AGT 617
|||.||.|| ||| ||||.| ||| |.|||.|| |..||| || |.| |||
Sbjct 667 CCTCAGGTGTTAACTATTGGTAG--CCAAGTGGCCACACTTTCTAAAGTA-GCAACT---AC--TTATTCTAGT 732
Query 618 TTCAGCACGTGCTCTTAACGTACAG------------------------------------------------- 642
||.|||| |||| .||||
Sbjct 733 TTAAGCA---GCTC------CACAGGAAATGTGGAAGATTCTTTCGAAGGTTTTCGAAACTTTTCTACCTTCTC 797
Query 643 -------------------------------------------------------------------------- 642
Sbjct 798 TTCTCCTGCTAGATATAGTGCTGCAGTTCTGAGCAGCGCAGCTGCTACTGTGTCTGCTGTTATTGCTACAAAAA 871
Query 643 -------------------------------------------------------------------------- 642
Sbjct 872 CCAGGCTCTACACTCCTGAAAGATATCACTCACTCCTGGATGCACTTTGCATCAGCCCTGTCTCCAAGCCTTTA 945
Query 643 -------------------------------------------------------------------------- 642
Sbjct 946 GCTTTTTCCTATCTGCAGTCCTCAAGGAAATCAACTGGCTCTATCCATGTTAAGAAAACAAGTAACTCTCAGGA 1019
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1020 GCCTTCTCCGCAGTTGGCTTCCTCGGTAGCTTCCACACGGAGCATGCCCGAGAGCCTGGACAGCCCAACCTCTG 1093
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1094 GCAGACCAGGGGTTACCAGCCTCACAACTGCAGCTGCCTTCAAGCCTGTAGGATCCACTGGCGTCATCAAGTCA 1167
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1168 CCAAGCTGGCAACGGCCAAACCAAGGAGTACCTTCCACTGGAAGAATCTCAAACAGCGCTACTTACTCAGGATC 1241
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1242 AGTGGCACCAGCCAACTCAGCTTTGGGACAAACCCAGCCAAGTGACCAGGACACTTTAGTGCAAAGAGCTGAGC 1315
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1316 ACATTCCAGCAGGGAAACGAACTCCGATGTGCGCCCATTGTAACCAGGTCATCAGAGGACCATTCTTAGTGGCA 1389
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1390 CTGGGGAAATCTTGGCACCCAGAAGAATTCAACTGCGCTCACTGCAAAAATACAATGGCCTACATTGGATTTGT 1463
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1464 AGAGGAGAAAGGAGCCCTGTATTGTGAGCTGTGCTATGAGAAATTCTTTGCCCCTGAATGTGGTCGATGCCAAA 1537
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1538 GGAAGATCCTTGGAGAAGTCATCAGTGCGTTGAAACAAACTTGGCATGTTTCCTGTTTTGTGTGTGTAGCCTGT 1611
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1612 GGAAAGCCCATTCGGAACAATGTTTTTCACTTGGAGGATGGTGAACCCTACTGTGAGACTGATTATTATGCCCT 1685
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1686 CTTTGGTACTATATGCCATGGATGTGAATTTCCCATAGAAGCTGGTGACATGTTCCTGGAAGCTCTGGGCTACA 1759
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1760 CCTGGCATGACACTTGCTTTGTATGCTCAGTGTGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCCAAGAAG 1833
Query 643 ------------------------------------------ 642
Sbjct 1834 GACAAGCCCCTGTGTAAGAAACATGCTCATTCTGTGAATTTT 1875
