Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_07649
• Subject: NM_001256427.2
• Aligned Length: 1464
• Identities: 605
• Gaps: 837

Alignment

Query    1  ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA  74

Query   75  CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG  148

Query  149  TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA  222

Query  223  GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGAAAAC  296
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||...||
Sbjct  223  GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGCCCAC  296

Query  297  A--CA------------------------------------AGTGACAAATAA------CCCTGG---------  317
            |  ||                                    ||.||||.|.||      |||.||         
Sbjct  297  AGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAGGGACAGAGAAGAGGATCCCAGGGTGACAGTA  370

Query  318  -------CACTGTGAAAATCCCACCTAAACGCCCACCAAGAAAACACATTGTGGAGCGCTATACAGAGTTTTAT  384
                   .|.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AACAGCAAAATGGGAAAATCCCACCTAAACGCCCACCAAGAAAACACATTGTGGAGCGCTATACAGAGTTTTAT  444

Query  385  CATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCAAGGACTGG  458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCAAGGACTGG  518

Query  459  AACAACTCAATCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTTGAAAGAATCTGAAGCCG  532
            |||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AACAACTCAGTCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTTGAAAGAATCTGAAGCCG  592

Query  533  ATAATACAAAGAAGGCAAA-------------------------------------------------------  551
            |||||||||||||||||||                                                       
Sbjct  593  ATAATACAAAGAAGGCAAATAACTCTCAGGAGCCTTCTCCGCAGTTGGCTTCCTCGGTAGCTTCCACACGGAGC  666

Query  552  --------------GGAAA--------------AGA--------TACC-------------------CCTTCAC  570
                          |||.|              |||        ||||                   ||||||.
Sbjct  667  ATGCCCGAGAGCCTGGACAGCCCAACCTCTGGCAGACCAGGGGTTACCAGCCTCACAGCTGCAGCTGCCTTCAA  740

Query  571  GTCTTTAG--TCC-----------CAAATACACAAAATTACGTGACTGGC---------ACCATGAAGT---TT  619
            |.||.|||  |||           |||.| |||.||        .|||||         ||||.|.|||   ||
Sbjct  741  GCCTGTAGGATCCACTGGCGTCATCAAGT-CACCAA--------GCTGGCAACGGCCAAACCAAGGAGTACCTT  805

Query  620  CAGCACGTG-----CTCTTAACGTACAG----------------------------------------------  642
            |  ||| ||     .|||.||   ||||                                              
Sbjct  806  C--CAC-TGGAAGAATCTCAA---ACAGCGCTACTTACTCAGGATCAGTGGCACCAGCCAACTCAGCTTTGGGA  873

Query  643  --------------------------------------------------------------------------  642
                                                                                      
Sbjct  874  CAAACCCAGCCAAGTGACCAGGACACTTTAGTGCAAAGAGCTGAGCACATTCCAGCAGGGAAACGAACTCCGAT  947

Query  643  --------------------------------------------------------------------------  642
                                                                                      
Sbjct  948  GTGCGCCCATTGTAACCAGGTCATCAGAGGACCATTCTTAGTGGCACTGGGGAAATCTTGGCACCCAGAAGAAT  1021

Query  643  --------------------------------------------------------------------------  642
                                                                                      
Sbjct 1022  TCAACTGCGCTCACTGCAAAAATACAATGGCCTACATTGGATTTGTAGAGGAGAAAGGAGCCCTGTATTGTGAG  1095

Query  643  --------------------------------------------------------------------------  642
                                                                                      
Sbjct 1096  CTGTGCTATGAGAAATTCTTTGCCCCTGAATGTGGTCGATGCCAAAGGAAGATCCTTGGAGAAGTCATCAGTGC  1169

Query  643  --------------------------------------------------------------------------  642
                                                                                      
Sbjct 1170  GTTGAAACAAACTTGGCATGTTTCCTGTTTTGTGTGTGTAGCCTGTGGAAAGCCCATTCGGAACAATGTTTTTC  1243

Query  643  --------------------------------------------------------------------------  642
                                                                                      
Sbjct 1244  ACTTGGAGGATGGTGAACCCTACTGTGAGACTGATTATTATGCCCTCTTTGGTACTATATGCCATGGATGTGAA  1317

Query  643  --------------------------------------------------------------------------  642
                                                                                      
Sbjct 1318  TTTCCCATAGAAGCTGGTGACATGTTCCTGGAAGCTCTGGGCTACACCTGGCATGACACTTGCTTTGTATGCTC  1391

Query  643  ----------------------------------------------------------  642
                                                                      
Sbjct 1392  AGTGTGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCCAAGAAGGACAAGCCCCTG  1449