Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07649
- Subject:
- NM_006457.5
- Aligned Length:
- 1803
- Identities:
- 609
- Gaps:
- 1176
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAA--GAAA 294
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||.|
Sbjct 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCAAAAGGGAGA 296
Query 295 AC----ACAAGT------------------------------------------------GACAAATAA----- 311
|| |.|||| .|||||.||
Sbjct 297 ACCTAAAGAAGTAGTTAAACCTGTGCCCATTACATCTCCTGCTGTGTCCAAAGTCACTTCCACAAACAACATGG 370
Query 312 -------------------------------------------------------------------------- 311
Sbjct 371 CCTACAATAAGGCACCACGGCCTTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT 444
Query 312 ----------------------------------------------------------------------CCCT 315
||||
Sbjct 445 GCCTTCACCCCAGCCCATGCGACCACCTCATCACATGCTTCCCCTTCACCCGTGGCTGCCGTCACTCCTCCCCT 518
Query 316 G---------------------------------------------------------GCACTGTG-------A 325
| ||||||.| |
Sbjct 519 GTTCGCTGCATCTGGACTGCATGCTAATGCCAATCTTAGTGCTGACCAGTCTCCATCTGCACTGAGCGCTGGTA 592
Query 326 AAA------------TCCCAC----------------------------------------------------- 334
||| ||||||
Sbjct 593 AAACTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGACTTCTCAGGAGCTAGCAGAG 666
Query 335 ----------------------------CTAAAC---------GCCCACCAAGAAAACACATTGTGGAGCGCTA 371
.||||| |||||||||||||||||||||||||||||||
Sbjct 667 GGACAGAGAAGAGGATCCCAGGGTGACAGTAAACAGCAAAATGGCCCACCAAGAAAACACATTGTGGAGCGCTA 740
Query 372 TACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGC 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCAAGAAGAGACTGATTGAGGATACTGAAGACTGGC 814
Query 446 GTCCAAGGACTGGAACAACTCAATCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTTGAAA 519
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTCCAAGGACTGGAACAACTCAGTCTCGCTCTTTCCGAATCCTTGCCCAGATCACTGGGACTGAACATTTGAAA 888
Query 520 GAATCTGAAGCCGATAATACAAAGAAGGCAAA------------------------------------------ 551
||||||||||||||||||||||||||||||||
Sbjct 889 GAATCTGAAGCCGATAATACAAAGAAGGCAAATAACTCTCAGGAGCCTTCTCCGCAGTTGGCTTCCTCGGTAGC 962
Query 552 ---------------------------GGAAA--------------AGA--------TACC------------- 563
|||.| ||| ||||
Sbjct 963 TTCCACACGGAGCATGCCCGAGAGCCTGGACAGCCCAACCTCTGGCAGACCAGGGGTTACCAGCCTCACAGCTG 1036
Query 564 ------CCTTCACGTCTTTAG--TCC-----------CAAATACACAAAATTACGTGACTGGC---------AC 609
||||||.|.||.||| ||| |||.| |||.|| .||||| ||
Sbjct 1037 CAGCTGCCTTCAAGCCTGTAGGATCCACTGGCGTCATCAAGT-CACCAA--------GCTGGCAACGGCCAAAC 1101
Query 610 CATGAAGT---TTCAGCACGTG-----CTCTTAACGTACAG--------------------------------- 642
||.|.||| ||| ||| || .|||.|| ||||
Sbjct 1102 CAAGGAGTACCTTC--CAC-TGGAAGAATCTCAA---ACAGCGCTACTTACTCAGGATCAGTGGCACCAGCCAA 1169
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1170 CTCAGCTTTGGGACAAACCCAGCCAAGTGACCAGGACACTTTAGTGCAAAGAGCTGAGCACATTCCAGCAGGGA 1243
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1244 AACGAACTCCGATGTGCGCCCATTGTAACCAGGTCATCAGAGGACCATTCTTAGTGGCACTGGGGAAATCTTGG 1317
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1318 CACCCAGAAGAATTCAACTGCGCTCACTGCAAAAATACAATGGCCTACATTGGATTTGTAGAGGAGAAAGGAGC 1391
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1392 CCTGTATTGTGAGCTGTGCTATGAGAAATTCTTTGCCCCTGAATGTGGTCGATGCCAAAGGAAGATCCTTGGAG 1465
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1466 AAGTCATCAGTGCGTTGAAACAAACTTGGCATGTTTCCTGTTTTGTGTGTGTAGCCTGTGGAAAGCCCATTCGG 1539
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1540 AACAATGTTTTTCACTTGGAGGATGGTGAACCCTACTGTGAGACTGATTATTATGCCCTCTTTGGTACTATATG 1613
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1614 CCATGGATGTGAATTTCCCATAGAAGCTGGTGACATGTTCCTGGAAGCTCTGGGCTACACCTGGCATGACACTT 1687
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1688 GCTTTGTATGCTCAGTGTGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCCAAGAAGGACAAGCCCCTGTGT 1761
Query 643 --------------------------- 642
Sbjct 1762 AAGAAACATGCTCATTCTGTGAATTTT 1788
