Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07649
- Subject:
- XM_006501743.1
- Aligned Length:
- 1969
- Identities:
- 550
- Gaps:
- 1346
Alignment
Query 1 ATGAGCAACTACAGTGTGTCACTGGTTGGCCCAGCTCCTTGGGGTTTCCGGCTGCAGGGCGGTAAGGATTTCAA 74
|||||||||||||||||||||.||||.||||||||||||||||||||||||||.||.||.||.|||||||||||
Sbjct 1 ATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAA 74
Query 75 CATGCCTCTGACAATCTCTAGTCTAAAAGATGGCGGCAAGGCAGCCCAGGCAAATGTAAGAATAGGCGATGTGG 148
||||||||||||||||||||||||.||.|||||.|||||||||.|.||||||.||||.||||||||.||.||||
Sbjct 75 CATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGG 148
Query 149 TTCTCAGCATTGATGGAATAAATGCACAAGGAATGACTCATCTTGAAGCCCAGAATAAGATTAAGGGTTGTACA 222
||||||||||.|||||.||.|.||||||.||||||||.|||||||||||||||||.||||||||||.||||||.
Sbjct 149 TTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACG 222
Query 223 GGCTCTTTGAATATGACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTT----------------- 279
|||||.||||||||||||||.||||||||.||.||||||.|||||..||||||||||
Sbjct 223 GGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGGGTGA 296
Query 280 -------------------CCTGT----------------------TCAAAAG--------------------- 291
||||| ||.||||
Sbjct 297 ACCTAAGGAAGTAGTTAAGCCTGTGCCCATTACATCTCCTGCTGTATCCAAAGTCACTTCCACTACCAACATGG 370
Query 292 -------------------------------------------AAAA--CACA--------------------- 299
|||| ||||
Sbjct 371 CCTACAATAAAGCACCACGGCCCTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCT 444
Query 300 -------------------------------------------------------------------------- 299
Sbjct 445 GCGTTCACCCCAGCCCATGCCGCCACTTCATCACATGCTTCCCCCACACCTGTGGCCGCTGCCACTCCCCTCCA 518
Query 300 -------------------------AGTGACAA----------------------------------------- 307
||||.|||
Sbjct 519 CCTCTCTGCATCCGGACTGCATGTTAGTGCCAATCTTAGTGCTGACCAGTGTTCATCTCCACCGAACACTGGTA 592
Query 308 -------------------------------------------------------------------------- 307
Sbjct 593 AACCTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCTAGCAGAG 666
Query 308 -------------------------------------------ATAACCCTGGCACTGTGAAAATCCCACCTAA 338
.|||||||||||||||||||||.||||||||
Sbjct 667 GGACAGAGAAGAGGATCCCAGGGTGACATTAAGCAGCAAAATGGTAACCCTGGCACTGTGAAAATTCCACCTAA 740
Query 339 ACGCCCACCAAGAAAACACATTGTGGAGCGCTATACAGAGTTTTATCATGTACCCACTCACAGTGATGCCAGCA 412
|||||||||||||||||||||||||||||||.|.||.|||||||||||..||||||||||||||||||||||||
Sbjct 741 ACGCCCACCAAGAAAACACATTGTGGAGCGCAACACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCA 814
Query 413 AGAAGAGACTGATTGAGGATACTGAAGACTGGCGTCCAAGGACTGGAACAACTCAATCTCGCTCTTTCCGAATC 486
||||..|.|||||||||||.|||||.||||||||.||..||||||||||.|||||.|||||.||||||||.|||
Sbjct 815 AGAAACGGCTGATTGAGGACACTGAGGACTGGCGCCCCCGGACTGGAACGACTCAGTCTCGTTCTTTCCGGATC 888
Query 487 CTTGCCCAGATCACTGGGACTGAACATTTGAAAGAATCTGAAGCCGATAATACAAAGAAGGCAAAGGAAA--AG 558
|||||||||||||||||||||||.|||.|||.||||||||||...||.|||||.|||||||||||.|.|| ||
Sbjct 889 CTTGCCCAGATCACTGGGACTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAATGTAAGCAG 962
Query 559 ATACCCCTTCACG-TCTTTAG--------------------------------------TCCC--------AAA 585
.| ||.||.| .||.||| |||| |.|
Sbjct 963 GT----CTACAAGAACTGTAGAAGGTGCTTTGGAAGGCTTTGGAAACTTTCCTGCCTTCTCCCCTCCTACTAGA 1032
Query 586 TACA-------------CAAAATTACGTGA-----CTGGCACCATGAAGTTTCAGCACGTGCTCT--------T 633
|||| || |||| |||.||| .||.||.|| |||||| .
Sbjct 1033 TACAGTGCTGTAGTCGTCA-------GTGATGCGGCTGCCAC-----TGTGTCTGC---TGCTCTCGCTGCGAA 1091
Query 634 AAC--GTA-----CAG---------------------------------------------------------- 642
||| ||| |||
Sbjct 1092 AACCAGTAGCACCCAGGAGCCTTCTCAGCAACCGGCGTCATCTGGAGCTTCACCTCTGAGCGCGTCTGAGGGCC 1165
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1166 CCGAGAGCCCAGGTTCCAGCAGGCCCTCGGTGGCTGGCCTCCGCTCCGCTGCTGCTTTCAAGCCTGTAGGATCC 1239
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1240 ACCAGCGTCAAGTCACCTAGCTGGCAGCGTCCAAACCAAGCAGCACCTTCTACTGGGAGAATTTCAAACAATGC 1313
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1314 ACGTTCTTCAGGTACAGGGGCGTCTGTGGGGCCTCCCCAGCCAAGTGACCAAGACACACTTGTGCAGAGAGCGG 1387
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1388 AACACATTCCAGCGGGCAAGCGGACCCCCATGTGTGCCCACTGCAACCAAGTTATCAGGGGACCTTTTCTTGTG 1461
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1462 GCTCTGGGGAAGTCCTGGCATCCAGAAGAATTTAACTGTGCTCATTGCAAAAACACAATGGCCTACATAGGCTT 1535
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1536 TGTAGAGGAGAAGGGAGCACTGTACTGTGAGCTATGCTATGAGAAGTTCTTTGCTCCTGAATGTGGCCGGTGCC 1609
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1610 AAAGGAAGATCCTTGGAGAAGTCATCAATGCTTTGAAGCAGACCTGGCATGTGTCCTGTTTTGTGTGTGTGGCC 1683
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1684 TGTGGAAAACCCATTCGTAATAATGTTTTCCACTTGGAAGATGGCGAGCCCTACTGTGAGACAGACTACTACGC 1757
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1758 CCTTTTTGGAACAATATGTCGTGGATGTGAATTCCCCATAGAGGCTGGTGACATGTTCCTGGAAGCTCTGGGAT 1831
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1832 ACACTTGGCATGATACTTGCTTTGTGTGCTCTGTGTGTTGTGAAAGTTTGGAAGGGCAGACATTTTTCTCCAAG 1905
Query 643 --------------------------------------------- 642
Sbjct 1906 AAGGACAAGCCACTTTGCAAAAAACATGCTCATTCTGTGAATTTT 1950
