Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_07652
• Subject: NM_001353972.1
• Aligned Length: 1272
• Identities: 867
• Gaps: 405

Alignment

Query    1  ATGTCTGACCACGGAGATGTGAGCCTCCCGCCCGAAGACCGGGTGAGGGCTCTCTCCCAGCTGGGTAGTGCGGT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGAGGTGAATGAAGACATTCCACCCCGTCGGTACTTCCGCTCTGGAGTTGAGATTATCCGAATGGCATCCATTT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACTCTGAGGAAGGCAACATTGAACATGCCTTCATCCTCTATAACAAGTATATCACGCTCTTTATTGAGAAACTA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CCAAAACATCGAGATTACAAATCTGCTGTCATTCCTGAAAAGAAAGACACAGTAAAGAAATTAAAGGAGATTGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  ATTTCCCAAAGCAGAAGAGCTGAAGGCAGAGCTGTTAAAACGATATACCAAAGAATATACAGAATATAATGAAG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AAAAGAAGAAGGAAGCAGAGGAATTGGCCCGGAACATGGCCATCCAGCAAGAGCTGGAAAAGGAAAAACAGAGG  444
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct    1  -----------------------------------ATGGCCATCCAGCAAGAGCTGGAAAAGGAAAAACAGAGG  39

Query  445  GTAGCACAACAGAAGCAGCAGCAATTGGAACAGGAACAGTTCCATGCCTTCGAGGAGATGATCCGGAACCAGGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   40  GTAGCACAACAGAAGCAGCAGCAATTGGAACAGGAACAGTTCCATGCCTTCGAGGAGATGATCCGGAACCAGGA  113

Query  519  GCTAGAAAAAGAGCGACTGAAAATTGTACAGGAGTTTGGGAAGGTAGACCCTGGCCTAGGTGGCCCGCTAGTGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  114  GCTAGAAAAAGAGCGACTGAAAATTGTACAGGAGTTTGGGAAGGTAGACCCTGGCCTAGGTGGCCCGCTAGTGC  187

Query  593  CTGACTTGGAGAAGCCCTCCTTAGATGTGTTCCCCACCTTAACAGTCTCATCCATACAGCCTTCAGACTGTCAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  188  CTGACTTGGAGAAGCCCTCCTTAGATGTGTTCCCCACCTTAACAGTCTCATCCATACAGCCTTCAGACTGTCAC  261

Query  667  ACAACTGTAAGGCCAGCTAAGCCACCTGTGGTGGACAGGTCCTTGAAACCTGGAGCACTGAGCAACTCAGAAAG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  262  ACAACTGTAAGGCCAGCTAAGCCACCTGTGGTGGACAGGTCCTTGAAACCTGGAGCACTGAGCAACTCAGAAAG  335

Query  741  TATTCCCACAATCGATGGATTGCGCCATGTGGTGGTGCCTGGGCGGCTGTGCCCACAGTTTCTCCAGTTAGCCA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  336  TATTCCCACAATCGATGGATTGCGCCATGTGGTGGTGCCTGGGCGGCTGTGCCCACAGTTTCTCCAGTTAGCCA  409

Query  815  GTGCCAACACTGCCCGGGGAGTGGAGACATGTGGAATTCTCTGTGGAAAACTGATGAGGAATGAATTTACCATT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  410  GTGCCAACACTGCCCGGGGAGTGGAGACATGTGGAATTCTCTGTGGAAAACTGATGAGGAATGAATTTACCATT  483

Query  889  ACCCATGTTCTCATCCCCAAGCAAAGTGCTGGGTCTGATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  484  ACCCATGTTCTCATCCCCAAGCAAAGTGCTGGGTCTGATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCT  557

Query  963  CATACAGGATCAGCAGGGCCTCATCACACTGGGCTGGATTCATACTCACCCCACACAGACCGCGTTTCTCTCCA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  558  CATACAGGATCAGCAGGGCCTCATCACACTGGGCTGGATTCATACTCACCCCACACAGACCGCGTTTCTCTCCA  631

Query 1037  GTGTCGACCTACACACTCACTGCTCTTACCAGATGATGTTGCCAGAGTCAGTAGCCATTGTTTGCTCCCCCAAG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  632  GTGTCGACCTACACACTCACTGCTCTTACCAGATGATGTTGCCAGAGTCAGTAGCCATTGTTTGCTCCCCCAAG  705

Query 1111  TTCCAGGAAACTGGATTCTTTAAACTAACTGACCATGGACTAGAGGAGATTTCTTCCTGTCGCCAGAAAGGATT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  706  TTCCAGGAAACTGGATTCTTTAAACTAACTGACCATGGACTAGAGGAGATTTCTTCCTGTCGCCAGAAAGGATT  779

Query 1185  TCATCCACACAGCAAGGATCCACCTCTGTTCTGTAGCTGCAGCCACGTGACTGTTGTGGACAGAGCAGTGACCA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  780  TCATCCACACAGCAAGGATCCACCTCTGTTCTGTAGCTGCAGCCACGTGACTGTTGTGGACAGAGCAGTGACCA  853

Query 1259  TCACAGACCTTCGA  1272
            ||||||||||||||
Sbjct  854  TCACAGACCTTCGA  867