Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07652
Subject:
NR_148671.2
Aligned Length:
2397
Identities:
1271
Gaps:
1125

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTTCCGGAACCTCCGGGTGTCATCCGCGGGGAAAGGTGGGGAAGGGTCCCGGGAACGTGGTGGGGCAGGGCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGAGCGTGGTTGGACTTTGAAGGGGATCGGCCGCCGTGAGTGTGGGGCCTGCAGCCTACTCTCCCCGAGTCCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTGCCCGGCCTGCCTCGCTCGAGGCACCCGACGGCTTCTGTCTCCGCGGGCTGGCGCCTGACCAGCCAGGCCCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCGGTTCCCCGCCTACTGCATTTGAAAGATCCCGAAAACCCTGGATGATTGTGCCTGGGGTTGGCAAGTTCGTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTGAGTGCCTTCAAGAAGGGTTCCTCAAGCAGTTGTCGATAGAGCCCTCCCTACTGTATACGCCCCCTCCGCTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATTCCTGCTACTTCCTTTCTCCTCCTCGTATTTCCCCCTCGGTCCTTTACGCCGCCTTTCCCCCTCATTTGCAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGCTGCATCCCCTTTTTGGAATTGCTCAACCAGGTGGTAACCGGCGCCGCTTCCTGGCCTTGGGAGGTGGTTC  518

Query    1  --------------------------------------------ATGTCTGACCACGGAGATGTGAGCCTCCCG  30
                                                        |||||||||||.||||||||||||||||||
Sbjct  519  CTTTCTTAACCCACAAGAACCTCTCCCAAGAGAACTTGGTCCTGATGTCTGACCATGGAGATGTGAGCCTCCCG  592

Query   31  CCCGAAGACCGGGTGAGGGCTCTCTCCCAGCTGGGTAGTGCGGTAGAGGTGAATGAAGACATTCCACCCCGTCG  104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCCGAAGACCGGGTGAGGGCTCTCTCCCAGCTGGGTAGTGCGGTAGAGGTGAATGAAGACATTCCACCCCGTCG  666

Query  105  GTACTTCCGCTCTGGAGTTGAGATTATCCGAATGGCATCCATTTACTCTGAGGAAGGCAACATTGAACATGCCT  178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GTACTTCCGCTCTGGAGTTGAGATTATCCGAATGGCATCCATTTACTCTGAGGAAGGCAACATTGAACATGCCT  740

Query  179  TCATCCTCTATAACAAGTATATCACGCTCTTTATTGAGAAACTACCAAAACATCGAGATTACAAATCTGCTGTC  252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCATCCTCTATAACAAGTATATCACGCTCTTTATTGAGAAACTACCAAAACATCGAGATTACAAATCTGCTGTC  814

Query  253  ATTCCTGAAAAGAAAGACACAGTAAAGAAATTAAAGGAGATTGCATTTCCCAAAGCAGAAGAGCTGAAGGCAGA  326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATTCCTGAAAAGAAAGACACAGTAAAGAAATTAAAGGAGATTGCATTTCCCAAAGCAGAAGAGCTGAAGGCAGA  888

Query  327  GCTGTTAAAACGATATACCAAAGAATATACAGAATATAATGAAGAAAAGAAGAAGGAAGCAGAGGAATTGGCCC  400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCTGTTAAAACGATATACCAAAGAATATACAGAATATAATGAAGAAAAGAAGAAGGAAGCAGAGGAATTGGCCC  962

Query  401  GGAACATGGCCATCCAGCAAGAGCTGGAAAAGGAAAAACAGAGGGTAGCACAACAGAAGCAGCAGCAATTGGAA  474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGAACATGGCCATCCAGCAAGAGCTGGAAAAGGAAAAACAGAGGGTAGCACAACAGAAGCAGCAGCAATTGGAA  1036

Query  475  CAGGAACAGTTCCATGCCTTCGAGGAGATGATCCGGAACCAGGAGCTAGAAAAAGAGCGACTGAAAATTGTACA  548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CAGGAACAGTTCCATGCCTTCGAGGAGATGATCCGGAACCAGGAGCTAGAAAAAGAGCGACTGAAAATTGTACA  1110

Query  549  GGAGTTTGGGAAGGTAGACCCTGGCCTAGGTGGCCCGCTAGTGCCTGACTTGGAGAAGCCCTCCTTAGATGTGT  622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GGAGTTTGGGAAGGTAGACCCTGGCCTAGGTGGCCCGCTAGTGCCTGACTTGGAGAAGCCCTCCTTAGATGTGT  1184

Query  623  TCCCCACCTTAACAGTCTCATCCATACAGCCTTCAGACTGTCACACAACTGTAAGGCCAGCTAAGCCACCTGTG  696
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCCCCACCTTAACAGTCTCATCCATACAGCCTTCAGACTGTCACACAACTGTAAGGCCAGCTAAGCCACCTGTG  1258

Query  697  GTGGACAGGTCCTTGAAACCTGGAGCACTGAGCAACTCAGAAAGTATTCCCACAATCGATGGATTGCGCCATGT  770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GTGGACAGGTCCTTGAAACCTGGAGCACTGAGCAACTCAGAAAGTATTCCCACAATCGATGGATTGCGCCATGT  1332

Query  771  GGTGGTGCCTGGGCGGCTGTGCCCACAGTTTCTCCAGTTAGCCAGTGCCAACACTGCCCGGGGAGTGGAGACAT  844
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GGTGGTGCCTGGGCGGCTGTGCCCACAGTTTCTCCAGTTAGCCAGTGCCAACACTGCCCGGGGAGTGGAGACAT  1406

Query  845  GTGGAATTCTCTGTGGAAAACTGATGAGGAATGAATTTACCATTACCCATGTTCTCATCCCCAAGCAAAGTGCT  918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GTGGAATTCTCTGTGGAAAACTGATGAGGAATGAATTTACCATTACCCATGTTCTCATCCCCAAGCAAAGTGCT  1480

Query  919  GGGTCTGATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCTCATACAGGATCAGCAGGGCCTCATCACACT  992
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GGGTCTGATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCTCATACAGGATCAGCAGGGCCTCATCACACT  1554

Query  993  GGGCTGGATTCATACTCACCCCACACAGACCGCGTTTCTCTCCAGTGTCGACCTACACACTCACTGCTCTTACC  1066
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GGGCTGGATTCATACTCACCCCACACAGACCGCGTTTCTCTCCAGTGTCGACCTACACACTCACTGCTCTTACC  1628

Query 1067  AGATGATGTTGCCAGAGTCAGTAGCCATTGTTTGCTCCCCCAAGTTCCAGGAAACTGGATTCTTTAAACTAACT  1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AGATGATGTTGCCAGAGTCAGTAGCCATTGTTTGCTCCCCCAAGTTCCAGGAAACTGGATTCTTTAAACTAACT  1702

Query 1141  GACCATGGACTAGAGGAGATTTCTTCCTGTCGCCAGAAAGGATTTCATCCACACAGCAAGGATCCACCTCTGTT  1214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GACCATGGACTAGAGGAGATTTCTTCCTGTCGCCAGAAAGGATTTCATCCACACAGCAAGGATCCACCTCTGTT  1776

Query 1215  CTGTAGCTGCAGCCACGTGACTGTTGTGGACAGAGCAGTGACCATCACAGACCTTCGA----------------  1272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
Sbjct 1777  CTGTAGCTGCAGCCACGTGACTGTTGTGGACAGAGCAGTGACCATCACAGACCTTCGATGAGCGTTTGAGTCCA  1850

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1851  ACACCTTCCAAGAACAACAAAACCATATCAGTAAACCGAAACTTCATTGCCCCTTCAATGTGGGAATCCAGCCA  1924

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1925  GACCCTATTCTTGGACAGCATCAGTGAAAGGGGCTTGGGAAAGCTCTTGGGCGTAGCAGCAGAGGCATGTCATA  1998

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1999  TATGGAAACCTTCCATGAGGGTGACCTCACCACTGGAACCCGTTCAACATAAACCTTGCTGCAAGAACTAGCAG  2072

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2073  AGCTCTTTGGACAAAACGTGCTCACCAAGATGGAGGAACAGAGCCCATGGCCCACTTACTACATGGATTCCCAC  2146

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2147  TTTACAGTGGAGAAGGAGCTTGCAGTAACCACAAAAGTTTCTGTATAAGCAAATTTAGGGAATTGAACTTCAGA  2220

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2221  CAGTGTGGTTGTCTCCTTACTTATGAACTTGGGAATACTTACTTAGGTAACAACTAACATCAGAGGTTTTTGAT  2294

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2295  CTGTAGCCTTTCTTTCTGTCCATAATTAGCTAATAGCTTCTGCTGTACAAACACAAACCATTCCCTGTCCAAGA  2368

Query 1273  -----------------------------  1272
                                         
Sbjct 2369  AAATTAAACTATATCATCAGAATAAGAAA  2397

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