Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07685
Subject:
XM_006533746.3
Aligned Length:
1705
Identities:
897
Gaps:
704

Alignment

Query    1  ATGGAGAGGGACCGGATCTCAGCCTTGAAAAGATCTTTTGAGGTCGAGGAGGTCGAGACACCCAACTCCACCCC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ACCCCGGAGGGTCCAGACTCCCCTACTCCGAGCCACTGTGGCCAGCTCCACCCAGAAATTCCAGGACCTGGGCG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGAAGAACTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAGG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GTGGAGCTCTCGGGCCCCAAGGCGGCCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GCAGGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTTGGGCCACAAGA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CGCCAGAACCGGCCCCTCGGAGGACGGAGATCACCATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATGGAG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CCCCCTGCCTCCAAGGTCCCCGAGGTGCCCACTGCCCCTGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCCA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  GATGCCCAAGCCTGCTGAGGCGCCCACCGCCCCCAGCCCAGCCCAGACCTTGGAGAATTCAGAGCCTGCCCCTG  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  TGTCTCAGCTGCAGAGCAGGCTGGAGCCCAAGCCCCAGCCCCCTGTGGCTGAGGCTACACCCCGGAGCCAGGAG  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  GCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATGGCCGACACCCCCAGAGATGCCGGGCTCAAGCAGGCGCC  740
                                             |||||.||||.|||.|||||||||..||||||||||||.||
Sbjct    1  ---------------------------------ATGGCTGACAACCCTAGAGATGCCATGCTCAAGCAGGCCCC  41

Query  741  TGCATCACGGAACGAGAAGGCCCCGGTGGACTTCGGCTACGTGGGGATTGACTCCATCCTGGAGCAGATGCGCC  814
            .||.|||||||||||.||||||||..||||.||||||||.||||||||.||||||||||||||||||||||||.
Sbjct   42  CGCGTCACGGAACGAAAAGGCCCCCATGGAGTTCGGCTATGTGGGGATCGACTCCATCCTGGAGCAGATGCGCA  115

Query  815  GGAAGGCCATGAAGCAGGGCTTCGAGTTCAACATCATGGTGGTCGGGCAGAGCGGCTTGGGTAAATCCACCTTA  888
            |||||||.|||||.||||||||||||||.||||||||||||||.||||||||||||.|.||.||.|||||.|||
Sbjct  116  GGAAGGCTATGAAACAGGGCTTCGAGTTTAACATCATGGTGGTTGGGCAGAGCGGCCTCGGGAAGTCCACTTTA  189

Query  889  ATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGAC  962
            |||||.|||||||||||.|||||||||||||||||||||||||||||||||||.|||||.||||||||||||||
Sbjct  190  ATCAATACCCTCTTCAAGTCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCGGAGGAACGCATCCCCAAGAC  263

Query  963  CATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACAC  1036
            .|||||.||||||||.|||||.|||||||||||.|||||.||.||.||.|||||||||||||||||||||||.|
Sbjct  264  GATCGAAATCAAGTCGATCACCCACGATATTGAAGAGAAGGGGGTTCGAATGAAGCTGACAGTGATTGACACGC  337

Query 1037  CAGGGTTCGGGGACCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAG  1110
            |.||.|||||.||||||||||||||.||||||||||||||||||||.||||||||||||||||||||.||.|||
Sbjct  338  CGGGCTTCGGAGACCACATCAACAATGAGAACTGCTGGCAGCCCATTATGAAGTTCATCAATGACCAATATGAG  411

Query 1111  AAATACCTGCAGGAGGAGGTCAACATCAACCGCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTA  1184
            ||.||||||||||||||.||||||||||||||.|||||||||||.||.||||||||.|||||||||||||||||
Sbjct  412  AAGTACCTGCAGGAGGAAGTCAACATCAACCGGAAGAAGCGCATTCCCGACACCCGTGTCCACTGCTGCCTCTA  485

Query 1185  CTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGTTTATGAAACGCCTGAGCAAGGTGGTCA  1258
            |||||||||.||||||||||||||.|||||||||||||||||.||.||.|||||.|||||.|||||.|||||.|
Sbjct  486  CTTCATCCCAGCCACCGGCCACTCGCTCAGGCCCCTGGACATTGAATTCATGAAGCGCCTAAGCAAAGTGGTGA  559

Query 1259  ACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAACAGCGGATCACC  1332
            ||||.|||||.||||||||||||||.|||||.||.||||||||||||||||||.|||||||||||||||||||.
Sbjct  560  ACATTGTCCCAGTCATCGCCAAGGCTGACACGCTGACCCTGGAGGAGAGGGTCTACTTCAAACAGCGGATCACT  633

Query 1333  GCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGT  1406
            |||||||||||||||||||||||.|||||||||||.||||||||.||||||||||||.|.||.|||||||||||
Sbjct  634  GCAGACCTGCTGTCCAACGGCATTGACGTGTACCCGCAGAAGGAGTTTGATGAGGACGCAGAAGACCGGCTGGT  707

Query 1407  GAACGAGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGA  1480
            ||||||.||||||||||||||||||||||||||||||||||||||.|||||.|||||.||.|||||.|||||||
Sbjct  708  GAACGAAAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGCGACCATGAGTATCAAGTCAATGGCAAGA  781

Query 1481  GGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTG  1554
            ||||.||.||.|||||||||||||||||.||.|||||||||||.||.|||||.||||||||.|||||.||||||
Sbjct  782  GGATTCTGGGAAGGAAGACCAAGTGGGGCACTATCGAAGTTGAGAATACCACTCACTGTGAATTTGCTTACCTG  855

Query 1555  CGGGACCTTCTCATCAGGACGCACATGCAGAACATCAAGGACATCACCAGCAGCATCCACTTCGAGGCGTACCG  1628
            |||||.||.||.|||||||||||||||||.||||||||.|||||||||||||.||||||||||||.||.|||||
Sbjct  856  CGGGATCTCCTTATCAGGACGCACATGCAAAACATCAAAGACATCACCAGCAACATCCACTTCGAAGCCTACCG  929

Query 1629  TGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCGTGGA-GGAGAAGGAGCCAGAAGCCCCGGAG  1701
            .|||||.||||||||||||||||.|||||||||||||||||    ||| .|||||||||||.|||||||.||||
Sbjct  930  AGTGAAACGCCTCAACGAGGGCAACAGCGCCATGGCCAACG----GGATCGAGAAGGAGCCGGAAGCCCAGGAG  999

Query 1702  AGG  1704
            |.|
Sbjct 1000  ATG  1002

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