Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07723
- Subject:
- NR_135496.2
- Aligned Length:
- 2881
- Identities:
- 1133
- Gaps:
- 1593
Alignment
Query 1 -------------------------------ATGATCCCCACCTTCACGGCTCTGCTCTGCCTCGGGCTGAGTC 43
||||..|||.||.||||.||.|||||||||||.||||||||||
Sbjct 1 GCAGAGCGCGGGGTCACCGGGAGGAGACGCCATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTC 74
Query 44 TGGGCCCCAGGACCGACATGCAGGCAGGGCCCCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATC 117
||||||||||||||..||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGGCCCCAGGACCCGCATGCAGGCAGGGCCCTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATC 148
Query 118 AGCTGGGGGAACTCTGTGACCATCTGGTGTCAGGGGACCCTGGAGGCTCGGGAGTACCGTCTGGATAAAGAGGA 191
||||||||||.|.|.||||||||||||||||||||||.|||||||||.|.||||||||..|||||||||||||.
Sbjct 149 AGCTGGGGGAGCCCCGTGACCATCTGGTGTCAGGGGAGCCTGGAGGCCCAGGAGTACCAACTGGATAAAGAGGG 222
Query 192 AAGCCCAGCACCCTGGGACAGACAGAACCCACTGGAGCCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGA 265
||||||||..||||||||||||.|.|||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 223 AAGCCCAGAGCCCTGGGACAGAAATAACCCACTGGAACCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGA 296
Query 266 CAGAGGACTATGCAGGGAGATACCGCTGTTACTATCGCAGCCCTGTAGGCTGGTCACAGCCCAGTGACCCCCTG 339
||.||.||.|||||||||||||||||||..|||||..||||.|||.||||||||||.|||||||.|||||||||
Sbjct 297 CACAGCACCATGCAGGGAGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTG 370
Query 340 GAGCTGGTGATGACAGGAGCCTACAGTAAACCCACCCTTTCAGCCCTGCCGAGTCCT----------------- 396
||||||||||||||||||..|||||..|||||||||||.|||||||||||.||.|||
Sbjct 371 GAGCTGGTGATGACAGGATTCTACAACAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGG 444
Query 397 -------------------------------------------------------------------------- 396
Sbjct 445 GAATATGACCCTCCGATGTGGCTCACAGAAGGGATATCACCATTTTGTTCTGATGAAGGAAGGAGAACACCAGC 518
Query 397 -------------------------------------------------------------------------- 396
Sbjct 519 TCCCCCGGACCCTGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGACC 592
Query 397 -------------------------------------------------------------------------- 396
Sbjct 593 CCCAGCCACAGCTGACAGGTTGTGGGGAGTTTGGCTGGTGACTGAATCTGGAAAGGACCCAGAGTGATGTGTTG 666
Query 397 --------------------------------------------------------------CTT--------- 399
|||
Sbjct 667 AAGGACGGGCTGAAGGCATGAGGGAGACCCCATGGGGAGGCTCTGACATGGGAGGAGGAGCCCTTGACCACGTT 740
Query 400 -------------------------------------------------------------------------- 399
Sbjct 741 CACCTGGAAGGGGAGGACTCAGGAAGGCATCGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTG 814
Query 400 -------------------------------------------------------------------------- 399
Sbjct 815 TCCTGGCCCCTGGGCAGAGCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAG 888
Query 400 -------------------------------------------------------------------------- 399
Sbjct 889 GAGGGGGAACGTGACTTCCTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCT 962
Query 400 -------------------------------------------------------------------------- 399
Sbjct 963 GGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGAGTGGTCGG 1036
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1037 CCCCCAGTGACCCCCTGGACATCCTGATCACAGGACAGATCTATGACACCGTCTCCCTGTCAGCACAGCCGGGC 1110
Query 400 ------GTGACCTCAGGAAAGAGCGTGACCCTGCTGTGTCAGTCACGGAGCCCAATGGACACTTTCCTTCTGAT 467
|||.||||||||.|||.|.|||||||||||||||||||||||.|.....|.||||||||||||||||.
Sbjct 1111 CCCACAGTGGCCTCAGGAGAGAACATGACCCTGCTGTGTCAGTCACGGGGGTATTTTGACACTTTCCTTCTGAC 1184
Query 468 CAAGGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCAGAGCACGGAGCTCAGCAGCACCAGGCTGAATTCC 541
|||.||..|||||||||||||||.|||||.||||||||||..|.||||||||||..||.|||||||||||||||
Sbjct 1185 CAAAGAAGGGGCAGCCCATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGGCTGAATTCC 1258
Query 542 CCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAGGTGCTTCAGCTCACACGGCTTCTCCCACTACCTG 615
|||||||||||||||||||||..||||.|||||||||||||||||.|.||||||.|.|||.|..||.|.|||||
Sbjct 1259 CCATGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCACGCAGCTCCAACCCCCACCTG 1332
Query 616 CTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAGGATCCT-TGGAGGGTCCCAGGCCCTCACCCACAA 688
|||||...|||||||||.||||||||.|||||.|||||||||..|| ||||||.| ||||.|.|.||||||||.
Sbjct 1333 CTGTCTTTCCCCAGTGAGCCCCTGGAACTCATGGTCTCAGGACACTCTGGAGGCT-CCAGCCTCCCACCCACAG 1405
Query 689 GGTCCGTCTCAACAGCTGCAGGCCCTGAGGACCAGCCCCTCATGCCTACAGGGTCAGTCCCCCACA-GTGGTCT 761
||.| ||||| ||||| .||||||
Sbjct 1406 GGCC-----------------GCCCT-----------------------------------CCACACCTGGTCT 1427
Query 762 GAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTCTCCATCCTGCTTCTCTCCCTCCTCCTCTTCCTCC 835
|.||||..||..||||||..||||.|||||||.|||||.||.|.|||||||.||||.|||||||||||||||||
Sbjct 1428 GGGAAGATACCTGGAGGTTTTGATTGGGGTCTCGGTGGCCTTCGTCCTGCTGCTCTTCCTCCTCCTCTTCCTCC 1501
Query 836 TCCTCCAACACTGGCGTCAGGGAAAACACAGGACATTGGCCCAGAGACAGGCTGATTTCCAACGTCCTCCAGGG 909
||||||..|....||||||..|.|||||||||||||..|.|||||||.||.||||||||||.||||||.|||||
Sbjct 1502 TCCTCCTCCGTCAGCGTCACAGCAAACACAGGACATCTGACCAGAGAAAGACTGATTTCCAGCGTCCTGCAGGG 1575
Query 910 GCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGGAGAAAA 983
|||||.|||.||||||||||||||.|||||||.|.||||||||||||||||||||||||||||||||.||||||
Sbjct 1576 GCTGCGGAGACAGAGCCCAAGGACAGGGGCCTGCTGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGAAGAAAA 1649
Query 984 CTTCTGTGCTGCCGTGAAGAACACACAGCCTGAGGACGGGGTGGAAATGGACACTCGGCAGAGCCCACACGATG 1057
|.|||.||||||.||||||.||||||||.||||||||.|||||||..|||||| |.||||||||||||||||
Sbjct 1650 CCTCTATGCTGCTGTGAAGGACACACAGTCTGAGGACAGGGTGGAGCTGGACA---GTCAGAGCCCACACGATG 1720
Query 1058 AAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTCTCCTCCCTCC 1131
||||||||||||||||||||||||||..|||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1721 AAGACCCCCAGGCAGTGACGTATGCCCCGGTGAAACACTCCAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTCC 1794
Query 1132 CCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCAGAAGAGGACAGACAGATGGACACTGAGGCTGC 1205
.|||||||||||||||||||||||||||||||||||||||..|||||||||||.||||||||||||||||||||
Sbjct 1795 TCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGTGGAAGAGGACAGGCAGATGGACACTGAGGCTGC 1868
Query 1206 TGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCGGCTGCACAGCTTTACCCTCAGACAGAAGGCAACTGAGC 1279
|||||||||||||.|||||||||||||||||||||.||||||||||||.|||||.||||.||||||||||||||
Sbjct 1869 TGCATCTGAAGCCTCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTTAGACGGAAGGCAACTGAGC 1942
Query 1280 CTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAGTGTCTATGCCACTCTGGCCATCCAC--------- 1344
|||||||||||||||||||||...||||||||||||||||..||||.||||||||||||||||||
Sbjct 1943 CTCCTCCATCCCAGGAAGGGGAACCTCCAGCTGAGCCCAGCATCTACGCCACTCTGGCCATCCACTAGCCCGGG 2016
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2017 GGGTACGCAGACCCCACACTCAGCAGAAGGAGACTCAGGACTGCTGAAGGCACGGGAGCTGCCCCCAGTGGACA 2090
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2091 CCAGTGAACCCCAGTCAGCCTGGACCCCTAACACAGACCATGAGGAGACGCTGGGAACTTGTGGGACTCACCTG 2164
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2165 ACTCAAAGATGACTAATATCGTCCCATTTTGGAAATAAAGCAACAGACTTCTCAACAATCAATGAGTTAATAAC 2238
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2239 AAAAAAACAAAAAACAAAAACAGACGTAAAGGCCGGGTGTGGTACTCAGGAGGCTGAGTGGGGAGGATTCCTTG 2312
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2313 AACACAAGAAGTTAAGGCTGCTGAGGCTGCAGTGAGCTATGACTGTGCCACTGCACTCCAGCCTGTGTGACAGA 2386
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2387 GCGAGACCTTGTCTCTAAAAAAAAAAACAGTGAATGTTTTAAACTGAATGATAATGTAAATATTATACATCGAA 2460
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2461 CTTATGACATGGGAAAATTAAGAAGCATAAATAGGCCGGGCGCGGTGGCTCACGCCTATAATCTCAGCACTTTG 2534
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2535 GGAGGCTGATGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCT 2608
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2609 ACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGCGAGTGCCTATAGTCCCAGCTACTCAGGAGGCTGAGGCA 2682
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2683 GGAGAATGGCATGAGCCCGGGAGGCAGAGCTTGCAGTGAGCTGAGATCGCACCACTGCACTCCAGCCTGGGCGA 2756
Query 1345 --------------------------------------------------------------------- 1344
Sbjct 2757 CAGAGTGAGATTCCGTCTCGAAAAAAAAAAAAAAAGAAAGAAAAAAAATAAAAAAGAAGCATAACCAGG 2825
