Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07723
- Subject:
- XM_011526332.3
- Aligned Length:
- 2002
- Identities:
- 1145
- Gaps:
- 677
Alignment
Query 1 ATGATCCCCACCTTCACGGCTCTGCTCTGCCTCGGGCTGAGTCTGGGCCCCAGGACCGACATGCAGGCAGGGCC 74
||||.|||||.|.||||||..|||.||||.|||||||||||||||||||||.|||||.||.||||||||||||.
Sbjct 1 ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCA 74
Query 75 CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTC 148
|||||||||.|||||||||||||||||.||||||||||||||||.|..|||||...||||||||.||.||||||
Sbjct 75 CCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTC 148
Query 149 AGGGGACCCTGGAGGCTCGGGAGTACCGTCTGGATAAAGAGGAAAG--CCCAGCACCCTGGGACAGACAGAACC 220
|||||..||.||||.|.|.|||||||||||| |||.||||.|||| ..|||||||||||...|.||.||.||
Sbjct 149 AGGGGGGCCAGGAGACCCAGGAGTACCGTCT--ATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCC 220
Query 221 CACTGGAGCCCAAGAACAA-GGCCAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTG 293
|||.|||||....|||.|| |||||| |||.|||||||||||||.||...|||..|..|||||.|.||.|||||
Sbjct 221 CACAGGAGCTTGTGAAGAAGGGCCAG-TTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTG 293
Query 294 TTACTATCGCAG---CCCTGTAGGCTGGTCACAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGAGCCTACA 364
|||||||.|.|| |.|||.||||.|.|||.||..||||||||||||||||||||||.|||||||||||||||
Sbjct 294 TTACTATGGTAGCGACACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACA 367
Query 365 GTAAACCCACCCTTTCAGCCCTG--------------------------------------------------- 387
..|||||||||||.|||||||.|
Sbjct 368 TCAAACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGACTCA 441
Query 388 -------------------------------------------------------------------------- 387
Sbjct 442 CAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCCAGCC 515
Query 388 -------------------------------------------------CCGAGTC------------------ 394
|||||||
Sbjct 516 CCATGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTACAGGT 589
Query 395 -------------------CTCT--------------------------------------------------- 398
||||
Sbjct 590 GCTATGCTTATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGT 663
Query 399 -------------------------------------------------------------------------- 398
Sbjct 664 GTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGCAGTG 737
Query 399 -------------------------------------------------------------------------- 398
Sbjct 738 TGGCTCTGATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCTGGCG 811
Query 399 ----------------------------------------------TGTGA----------------------- 403
|||||
Sbjct 812 CACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTAC 885
Query 404 -------------------------------------------------------------------------- 403
Sbjct 886 AGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGG 959
Query 404 -------------------------------------------------------------------------- 403
Sbjct 960 TGAGGAGCCCAGCGGGTTCAGTCAGGGACCCAGGCTCCGCACAGGCCCTGCCGGGGGAGCTCAGCCGGGCCCCA 1033
Query 404 ------CCTCAGGAAAGAGCGTGACCCTGCTGTGTCAGTCACGGAGCCCAATGG----ACACTTTCCTTCTGAT 467
||||||||.|||.|||||||||||||||||||||||.|.| |||| |.|||||||||||||.
Sbjct 1034 CGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGG----ATGGATGCAAACTTTCCTTCTGAC 1103
Query 468 CAAGGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCAGAGCACGGAGCTCAGCAGCACCAGGCTGAATTCC 541
|||||||.|||||||..||..||.|..||.|||.||||||..|.||..|.||||..|..|||||||||||||||
Sbjct 1104 CAAGGAGGGGGCAGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCC 1177
Query 542 CCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAGGTGCTTCAGCTCACACGGCTTCTCCCA----CTA 611
|||||.|||||||||||||||..||.|.|||||||||||||||||.|.|||||||..||| ||| |||
Sbjct 1178 CCATGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCT----CCAAACCCTA 1247
Query 612 CCTGCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAGGATCCT-TGGAGGGTCCCAGGCCCTCACCC 684
|||||||.|.||||||||||||||||||||||||.|.|||||||||.|.| ||| |||.||||| |||.||.
Sbjct 1248 CCTGCTGACTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTGG-GGGCCCCAG---CTCCCCG 1317
Query 685 ACAA---GGTCCGTCTCAACAGCTGCAGGCCCTGAGGACCAGCCCCTCATGCCTACAGGGTCAGTCCCCCACAG 755
|||| |..||..|||.|||.|||||||||||||||||||||||||||..||.||.|||||.|..|||||.||
Sbjct 1318 ACAACAGGCCCCACCTCCACATCTGCAGGCCCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGATCCCCAGAG 1391
Query 756 TGGTCTGAGAAGGCA-CTGGGAGGTACTGATCGGGGTCTTGGTGGTCTCCATCCTGCTTCT-CTC-----CCTC 822
|||||||.||||||| ||||| |||..|||||||..|||||||||.|..||||||.||.|| ||| ||||
Sbjct 1392 TGGTCTGGGAAGGCACCTGGG-GGTTGTGATCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCCTCCTCCTC 1464
Query 823 CTCCTCTTCCTCCTCCTCCAACACTGGCGTCAGGGAAAACACAGGACATTGGCCCAGAGACAGGCTGATTTCCA 896
||||||||||||.||||||.|||..|.||||||||.||||||.||||||.|.||||||||.|||||||||||||
Sbjct 1465 CTCCTCTTCCTCATCCTCCGACATCGACGTCAGGGCAAACACTGGACATCGACCCAGAGAAAGGCTGATTTCCA 1538
Query 897 ACGTCCTCCAGGGGCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGAGGTCCAGCCCAGCTGCTGACG 970
||.||||.|||||||||..|.|||||||||||..|||.|.|||||.|||.|||||||||||||||||||.||.|
Sbjct 1539 ACATCCTGCAGGGGCTGTGGGGCCAGAGCCCACAGACAGAGGCCTGCAGTGGAGGTCCAGCCCAGCTGCCGATG 1612
Query 971 TCCAGGGAGAAAACTTCTGTGCTGCCGTGAAGAACACACAGCCTGAGGACGGGGTGGAAATGGACACTCGGCAG 1044
.|||||.|||||||.|||.|||||||||||||.||||||||||||||||.||||||||.||||||||||| |
Sbjct 1613 CCCAGGAAGAAAACCTCTATGCTGCCGTGAAGCACACACAGCCTGAGGATGGGGTGGAGATGGACACTCG---G 1683
Query 1045 AGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACACTCCAGACCTAGGAGAGAAATGGC 1118
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1684 AGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGAGAAATGGC 1757
Query 1119 CTCTCCTCCCTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCAGAAGAGGACAGACAGATGG 1192
|||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||
Sbjct 1758 CTCTCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGG 1831
Query 1193 ACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCGGCTGCACAGCTTTACCCTCAGACAG 1266
||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||.||||||||||.|
Sbjct 1832 ACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGG 1905
Query 1267 AAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAGTGTCTATGCCACTCTGGCCAT 1340
.||||||||||||||||||||||||||||||||.||||||||||||.||||||..||||.||||||||||||||
Sbjct 1906 GAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCAT 1979
Query 1341 CCAC 1344
||||
Sbjct 1980 CCAC 1983