Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07723
- Subject:
- XM_011548574.3
- Aligned Length:
- 1949
- Identities:
- 1176
- Gaps:
- 607
Alignment
Query 1 ATGATCCCCACCTTCACGGCTCTGCTCTGCCTCGGGCTGAGTCTGGGCCCCAGGACCGACATGCAGGCAGGGCC 74
||||..|||.||.||||.||.|||||||||||.||||||||||||||||||||||||..|.|||||||||||||
Sbjct 1 ATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCGTGCAGGCAGGGCC 74
Query 75 CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTC 148
|.|||||||||||||||||||||||||||||||||||||||||||||||||||.|.|.||||||||||||||||
Sbjct 75 CTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTC 148
Query 149 AGGGGACCCTGGAGGCTCGGGAGTACCGTCTGGATAAAGAGGAAAGCCCAGCACCCTGGGACAGACAGAACCCA 222
||||||.|||||||||.|.|||||||||.|||||||||||||.||||||||..||||.|||||||.|.||||||
Sbjct 149 AGGGGAGCCTGGAGGCCCAGGAGTACCGACTGGATAAAGAGGGAAGCCCAGAGCCCTTGGACAGAAATAACCCA 222
Query 223 CTGGAGCCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTGTTA 296
|||||.||||||||||||||||||||||||||||||||||||||||||.||.||||.||||||||||||||..|
Sbjct 223 CTGGAACCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGCACCATGCGGGGAGATACCGCTGCCA 296
Query 297 CTATCGCAGCCCTGTAGGCTGGTCACAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGAGCCTACAGTAAAC 370
||||..||||.|||.||||||||||.|||||||.|||||||||||||||||||||||||||..|||||..||||
Sbjct 297 CTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGGATTCTACAACAAAC 370
Query 371 CCACCCTTTCAGCCCTGCCGAGTCCT------------------------------------------------ 396
|||||||.|||||||||||.||.|||
Sbjct 371 CCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCGATGTGGCTCACAGAAG 444
Query 397 -------------------------------------------------------------------------- 396
Sbjct 445 GGATATCACCATTTTGTTCTGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCCTGGACTCACAGCAGCTCCA 518
Query 397 -------------------------------------------------------------------------- 396
Sbjct 519 CAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGAACCCCAGCCACAGGTGGAGGTTCACATGCTATT 592
Query 397 -------------------------------------------------------------------------- 396
Sbjct 593 ACTATTATATGAACACCCCCCAGGTGTGGTCCCACCCCAGTGACCCCCTGGAGATTCTGCCCTCAGGCGTGTCT 666
Query 397 -------------------------------------------------------------------------- 396
Sbjct 667 AGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTGGGCAGAGCCTGACCCTCCAGTGTGGCTC 740
Query 397 ------------------------------------------------CTT----------------------- 399
|||
Sbjct 741 TGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTTCCTCCAGCGCCCTGGCCAGCAGC 814
Query 400 -------------------------------------------------------------------------- 399
Sbjct 815 CCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCCCTCCCACGGGGGCCAGTACAGGTGC 888
Query 400 -------------------------------------------------------------------------- 399
Sbjct 889 TATGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGAACATCCTGATGGCAGGACAGAT 962
Query 400 ----------------------------------------GTGACCTCAGGAAAGAGCGTGACCCTGCTGTGTC 433
|||.||||||||.|||.|||||||||||||||||
Sbjct 963 CTATGACACCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTC 1036
Query 434 AGTCACGGAGCCCAATGGACACTTTCCTTCTGATCAAGGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCA 507
|||||.||.|.|...|.||||||||||||||||.|||.||..|||||||||||||||.|||||.||||||||||
Sbjct 1037 AGTCATGGTGGCAGTTTGACACTTTCCTTCTGACCAAAGAAGGGGCAGCCCATCCCCCACTGCGTCTGAGATCA 1110
Query 508 GAGCACGGAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAG 581
..|.||||||||||..||.||||||||||||||||||||||||||||||||||||..||||.||||||||||||
Sbjct 1111 ATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAG 1184
Query 582 GTGCTTCAGCTCACACGGCTTCTCCCACTACCTGCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAG 655
|||||.|.|||||.||.|||.|..||.|.||||||||||...|||||||||.||||||||.|||||.|||||||
Sbjct 1185 GTGCTACGGCTCATACAGCTCCAACCCCCACCTGCTGTCTTTCCCCAGTGAGCCCCTGGAACTCATGGTCTCAG 1258
Query 656 GATCCT-TGGAGGGTCCCAGGCCCTCACCCACAAGGTCCG-TCTCAACAGCTGCAGGCCCTGAGGACCAGCCCC 727
||..|| ||||||.| ||||.|.|.||||||| |||.||| .|||.|||.|||.|||.||||||||||||||||
Sbjct 1259 GACACTCTGGAGGCT-CCAGCCTCCCACCCAC-AGGGCCGCCCTCCACACCTGGAGGTCCTGAGGACCAGCCCC 1330
Query 728 TCATGCCTACAGGGTCAGTCCCCCACAGTGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTC 801
|.|..||..|||||||||.|||.||.|.|||||||.||||..||..||||||..||||.|||||||.|||||.|
Sbjct 1331 TTAACCCCCCAGGGTCAGGCCCTCAGAATGGTCTGGGAAGATACCTGGAGGTTTTGATTGGGGTCTCGGTGGCC 1404
Query 802 TCCATCCTGCTTCTCTCCCTCCTCCTCTTCCTCCTCCTCCAACACTGGCGTCAGGGAAAACACAGGACATTGGC 875
|.|.|||||||.||||.|||||||||||||||||||||||.||....||||||..|.|||||||||||||..|.
Sbjct 1405 TTCGTCCTGCTGCTCTTCCTCCTCCTCTTCCTCCTCCTCCGACGTCAGCGTCACAGCAAACACAGGACATCTGA 1478
Query 876 CCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGA 949
|||||||.||.||||||||||.||||||.||||||||||.|||.||||||||||||||.|||||||.|.|||||
Sbjct 1479 CCAGAGAAAGACTGATTTCCAGCGTCCTGCAGGGGCTGCGGAGACAGAGCCCAAGGACAGGGGCCTGCTGAGGA 1552
Query 950 GGTCCAGCCCAGCTGCTGACGTCCAGGGAGAAAACTTCTGTGCTGCCGTGAAGAACACACAGCCTGAGGACGGG 1023
|||||||||||||||||||||||||||.|||||||.|||.|||||||||||||.||||||||.||||||||.||
Sbjct 1553 GGTCCAGCCCAGCTGCTGACGTCCAGGAAGAAAACCTCTATGCTGCCGTGAAGGACACACAGTCTGAGGACAGG 1626
Query 1024 GTGGAAATGGACACTCGGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACACTC 1097
|||||..||||||.||.|||||||||||||||||||||||||||||||||||||||||||..||||||||||||
Sbjct 1627 GTGGAGCTGGACAGTCAGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCCCGGTGAAACACTC 1700
Query 1098 CAGACCTAGGAGAGAAATGGCCTCTCCTCCCTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGG 1171
|||.||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1701 CAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTCCTCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGG 1774
Query 1172 CAGAAGAGGACAGACAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCGGCTG 1245
..|||||||||||.|||||||||||||||||||||||||||||||||.|||||||||||||||||||||.||||
Sbjct 1775 TGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCTCCCAGGATGTGACCTACGCCCAGCTG 1848
Query 1246 CACAGCTTTACCCTCAGACAGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAG 1319
||||||||.|||||.||||.|||||||||||||||||||||||||||||||||||...||||||||||||||||
Sbjct 1849 CACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGAACCTCCAGCTGAGCCCAG 1922
Query 1320 TGTCTATGCCACTCTGGCCATCCAC 1344
..||||.||||||||||||||||||
Sbjct 1923 CATCTACGCCACTCTGGCCATCCAC 1947
