Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07723
- Subject:
- XM_017026183.2
- Aligned Length:
- 1999
- Identities:
- 1145
- Gaps:
- 674
Alignment
Query 1 ATGATCCCCACCTTCACGGCTCTGCTCTGCCTCGGGCTGAGTCTGGGCCCCAGGACCGACATGCAGGCAGGGCC 74
||||.|||||.|.||||||..|||.||||.|||||||||||||||||||||.|||||.||.||||||||||||.
Sbjct 1 ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCA 74
Query 75 CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTC 148
|||||||||.|||||||||||||||||.||||||||||||||||.|..|||||...||||||||.||.||||||
Sbjct 75 CCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTC 148
Query 149 AGGGGACCCTGGAGGCTCGGGAGTACCGTCTGGATAAAGAGGAAAG--CCCAGCACCCTGGGACAGACAGAACC 220
|||||..||.||||.|.|.|||||||||||| |||.||||.|||| ..|||||||||||...|.||.||.||
Sbjct 149 AGGGGGGCCAGGAGACCCAGGAGTACCGTCT--ATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCC 220
Query 221 CACTGGAGCCCAAGAACAA-GGCCAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTG 293
|||.|||||....|||.|| |||||| |||.|||||||||||||.||...|||..|..|||||.|.||.|||||
Sbjct 221 CACAGGAGCTTGTGAAGAAGGGCCAG-TTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTG 293
Query 294 TTACTATCGCAG---CCCTGTAGGCTGGTCACAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGAGCCTACA 364
|||||||.|.|| |.|||.||||.|.|||.||..||||||||||||||||||||||.|||||||||||||||
Sbjct 294 TTACTATGGTAGCGACACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACA 367
Query 365 GTAAACCCACCCTTTCAGCCCTG--------------------------------------------------- 387
..|||||||||||.|||||||.|
Sbjct 368 TCAAACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGACTCA 441
Query 388 -------------------------------------------------------------------------- 387
Sbjct 442 CAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCCAGCC 515
Query 388 -------------------------------------------------CCGAGTC------------------ 394
|||||||
Sbjct 516 CCATGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTACAGGT 589
Query 395 -------------------CTCT--------------------------------------------------- 398
||||
Sbjct 590 GCTATGCTTATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGT 663
Query 399 -------------------------------------------------------------------------- 398
Sbjct 664 GTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGCAGTG 737
Query 399 -------------------------------------------------------------------------- 398
Sbjct 738 TGGCTCTGATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCTGGCG 811
Query 399 ----------------------------------------------TGTGA----------------------- 403
|||||
Sbjct 812 CACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTAC 885
Query 404 -------------------------------------------------------------------------- 403
Sbjct 886 AGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGC 959
Query 404 -------------------------------------------------------------------------- 403
Sbjct 960 CCCTCGCCCATCCTTCTTCTCTCCAGGACAGTTCTATGACAGAGTCTCCCTCTCGGTGCAGCCGGGCCCCACGG 1033
Query 404 ---CCTCAGGAAAGAGCGTGACCCTGCTGTGTCAGTCACGGAGCCCAATGG----ACACTTTCCTTCTGATCAA 470
||||||||.|||.|||||||||||||||||||||||.|.| |||| |.|||||||||||||.|||
Sbjct 1034 TGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGG----ATGGATGCAAACTTTCCTTCTGACCAA 1103
Query 471 GGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCAGAGCACGGAGCTCAGCAGCACCAGGCTGAATTCCCCA 544
||||.|||||||..||..||.|..||.|||.||||||..|.||..|.||||..|..||||||||||||||||||
Sbjct 1104 GGAGGGGGCAGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCCCCA 1177
Query 545 TGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAGGTGCTTCAGCTCACACGGCTTCTCCCA----CTACCT 614
||.|||||||||||||||..||.|.|||||||||||||||||.|.|||||||..||| ||| ||||||
Sbjct 1178 TGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCT----CCAAACCCTACCT 1247
Query 615 GCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAGGATCCT-TGGAGGGTCCCAGGCCCTCACCCACA 687
||||.|.||||||||||||||||||||||||.|.|||||||||.|.| ||| |||.||||| |||.||.|||
Sbjct 1248 GCTGACTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTGG-GGGCCCCAG---CTCCCCGACA 1317
Query 688 A---GGTCCGTCTCAACAGCTGCAGGCCCTGAGGACCAGCCCCTCATGCCTACAGGGTCAGTCCCCCACAGTGG 758
| |..||..|||.|||.|| ||||||||||||||||||||||..||.||.|||||.|..|||||.|||||
Sbjct 1318 ACAGGCCCCACCTCCACATCT---GGCCCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGATCCCCAGAGTGG 1388
Query 759 TCTGAGAAGGCA-CTGGGAGGTACTGATCGGGGTCTTGGTGGTCTCCATCCTGCTTCT-CTC-----CCTCCTC 825
||||.||||||| ||||| |||..|||||||..|||||||||.|..||||||.||.|| ||| |||||||
Sbjct 1389 TCTGGGAAGGCACCTGGG-GGTTGTGATCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCCTCCTCCTCCTC 1461
Query 826 CTCTTCCTCCTCCTCCAACACTGGCGTCAGGGAAAACACAGGACATTGGCCCAGAGACAGGCTGATTTCCAACG 899
|||||||||.||||||.|||..|.||||||||.||||||.||||||.|.||||||||.|||||||||||||||.
Sbjct 1462 CTCTTCCTCATCCTCCGACATCGACGTCAGGGCAAACACTGGACATCGACCCAGAGAAAGGCTGATTTCCAACA 1535
Query 900 TCCTCCAGGGGCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGAGGTCCAGCCCAGCTGCTGACGTCC 973
||||.|||||||||..|.|||||||||||..|||.|.|||||.|||.|||||||||||||||||||.||.|.||
Sbjct 1536 TCCTGCAGGGGCTGTGGGGCCAGAGCCCACAGACAGAGGCCTGCAGTGGAGGTCCAGCCCAGCTGCCGATGCCC 1609
Query 974 AGGGAGAAAACTTCTGTGCTGCCGTGAAGAACACACAGCCTGAGGACGGGGTGGAAATGGACACTCGGCAGAGC 1047
|||.|||||||.|||.|||||||||||||.||||||||||||||||.||||||||.||||||||||||||||||
Sbjct 1610 AGGAAGAAAACCTCTATGCTGCCGTGAAGCACACACAGCCTGAGGATGGGGTGGAGATGGACACTCGGCAGAGC 1683
Query 1048 CCACACGATGAAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTC 1121
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1684 CCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTC 1757
Query 1122 TCCTCCCTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCAGAAGAGGACAGACAGATGGACA 1195
||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||
Sbjct 1758 TCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGGACA 1831
Query 1196 CTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCGGCTGCACAGCTTTACCCTCAGACAGAAG 1269
|||||||||||||||||||||||||||||||||||||||||||||.||||||||||||.||||||||||.|.||
Sbjct 1832 CTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGGAG 1905
Query 1270 GCAACTGAGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAGTGTCTATGCCACTCTGGCCATCCA 1343
||||||||||||||||||||||||||||||.||||||||||||.||||||..||||.|||||||||||||||||
Sbjct 1906 GCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCATCCA 1979
Query 1344 C 1344
|
Sbjct 1980 C 1980