Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07723
- Subject:
- XM_017026219.1
- Aligned Length:
- 1949
- Identities:
- 1140
- Gaps:
- 643
Alignment
Query 1 ATGATCCCCACCTTCACGGCTCTGCTCTGCCTCGGGCTGAGTCTGGGCCCCAGGACCGACATGCAGGCAGGGCC 74
||||..|||.||.||||.||.||||||||||| .|||||
Sbjct 1 ATGACGCCCGCCCTCACAGCCCTGCTCTGCCT------------------------------------TGGGCC 38
Query 75 CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTC 148
|.|||||||||||||||||||||||||||||||||||||||||||||||||||.|.|.||||||||||||||||
Sbjct 39 CTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTC 112
Query 149 AGGGGACCCTGGAGGCTCGGGAGTACCGTCTGGATAAAGAGGAAAGCCCAGCACCCTGGGACAGACAGAACCCA 222
||||||.|||||||||.|.||||||||..|||||||||||||.||||||||..||||||||||||.|.||||||
Sbjct 113 AGGGGAGCCTGGAGGCCCAGGAGTACCAACTGGATAAAGAGGGAAGCCCAGAGCCCTGGGACAGAAATAACCCA 186
Query 223 CTGGAGCCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTGTTA 296
|||||.|||||||||||||||||||||||||||||||||||||||.||.||.|||||||||||||||||||..|
Sbjct 187 CTGGAACCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACACAGCACCATGCAGGGAGATACCGCTGCCA 260
Query 297 CTATCGCAGCCCTGTAGGCTGGTCACAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGAGCCTACAGTAAAC 370
||||..||||.|||.||||||||||.|||||||.|||||||||||||||||||||||||||..|||||..||||
Sbjct 261 CTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGGATTCTACAACAAAC 334
Query 371 CCACCCTTTCAGCCCTGCCGAGTCCT------------------------------------------------ 396
|||||||.|||||||||||.||.|||
Sbjct 335 CCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCGATGTGGCTCACAGAAG 408
Query 397 -------------------------------------------------------------------------- 396
Sbjct 409 GGATATCACCATTTTGTTCTGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCCTGGACTCACAGCAGCTCCA 482
Query 397 -------------------------------------------------------------------------- 396
Sbjct 483 CAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGACCCCCAGCCACAGGTGGAGGTTCACATGCTATT 556
Query 397 -------------------------------------------------------------------------- 396
Sbjct 557 ACTATTATACAAACACCCCCTGGGTGTGGTCCCACCCCAGTGACCCCCTGGAGATTCTGCCCTCAGGCGTGTCT 630
Query 397 -------------------------------------------------------------------------- 396
Sbjct 631 AGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTGGGCAGAGCCTGACCCTCCAGTGTGGCTC 704
Query 397 ------------------------------------------------CTT----------------------- 399
|||
Sbjct 705 TGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTTCCTCCAGCGCCCTGGCCAGCAGC 778
Query 400 -------------------------------------------------------------------------- 399
Sbjct 779 CCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTACAGGTGC 852
Query 400 -------------------------------------------------------------------------- 399
Sbjct 853 TATGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCACAGGACAGAT 926
Query 400 ----------------------------------------GTGACCTCAGGAAAGAGCGTGACCCTGCTGTGTC 433
|||.||||||||.|||.|.|||||||||||||||
Sbjct 927 CTATGACACCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTCAGGAGAGAACATGACCCTGCTGTGTC 1000
Query 434 AGTCACGGAGCCCAATGGACACTTTCCTTCTGATCAAGGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCA 507
||||||||.|.....|.||||||||||||||||.|||.||..|||||||||||||||.|||||.||||||||||
Sbjct 1001 AGTCACGGGGGTATTTTGACACTTTCCTTCTGACCAAAGAAGGGGCAGCCCATCCCCCACTGCGTCTGAGATCA 1074
Query 508 GAGCACGGAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAG 581
..|.||||||||||..||.||||||||||||||||||||||||||||||||||||..||||.||||||||||||
Sbjct 1075 ATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAG 1148
Query 582 GTGCTTCAGCTCACACGGCTTCTCCCACTACCTGCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAG 655
|||||.|.||||||.|.|||.|..||.|.||||||||||...|||||||||.||||||||.|||||.|||||||
Sbjct 1149 GTGCTACGGCTCACGCAGCTCCAACCCCCACCTGCTGTCTTTCCCCAGTGAGCCCCTGGAACTCATGGTCTCAG 1222
Query 656 GATCCT-TGGAGGGTCCCAGGCCCTCACCCACAAGGTCCG-TCTCAACAGCTGCAGGCCCTGAGGACCAGCCCC 727
||..|| ||||||.| ||||.|.|.||||||| |||.||| .|||.|||.|||.|||.||||||||||||||||
Sbjct 1223 GACACTCTGGAGGCT-CCAGCCTCCCACCCAC-AGGGCCGCCCTCCACACCTGGAGGTCCTGAGGACCAGCCCC 1294
Query 728 TCATGCCTACAGGGTCAGTCCCCCACAGTGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTC 801
|.|..||..|||||||||.|||.||.|.|||||||.||||..||..||||||..||||.|||||||.|||||.|
Sbjct 1295 TTAACCCCCCAGGGTCAGGCCCTCAGAATGGTCTGGGAAGATACCTGGAGGTTTTGATTGGGGTCTCGGTGGCC 1368
Query 802 TCCATCCTGCTTCTCTCCCTCCTCCTCTTCCTCCTCCTCCAACACTGGCGTCAGGGAAAACACAGGACATTGGC 875
|.|.|||||||.||||.|||||||||||||||||||||||..|....||||||..|.|||||||||||||..|.
Sbjct 1369 TTCGTCCTGCTGCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCCGTCAGCGTCACAGCAAACACAGGACATCTGA 1442
Query 876 CCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGA 949
|||||||.||.||||||||||.||||||.||||||||||.|||.||||||||||||||.|||||||.|.|||||
Sbjct 1443 CCAGAGAAAGACTGATTTCCAGCGTCCTGCAGGGGCTGCGGAGACAGAGCCCAAGGACAGGGGCCTGCTGAGGA 1516
Query 950 GGTCCAGCCCAGCTGCTGACGTCCAGGGAGAAAACTTCTGTGCTGCCGTGAAGAACACACAGCCTGAGGACGGG 1023
|||||||||||||||||||||||||||.|||||||.|||.||||||.||||||.||||||||.||||||||.||
Sbjct 1517 GGTCCAGCCCAGCTGCTGACGTCCAGGAAGAAAACCTCTATGCTGCTGTGAAGGACACACAGTCTGAGGACAGG 1590
Query 1024 GTGGAAATGGACACTCGGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACACTC 1097
|||||..||||||.||.|||||||||||||||||||||||||||||||||||||||||||..||||||||||||
Sbjct 1591 GTGGAGCTGGACAGTCAGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCCCGGTGAAACACTC 1664
Query 1098 CAGACCTAGGAGAGAAATGGCCTCTCCTCCCTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGG 1171
|||.||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1665 CAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTCCTCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGG 1738
Query 1172 CAGAAGAGGACAGACAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCGGCTG 1245
..|||||||||||.|||||||||||||||||||||||||||||||||.|||||||||||||||||||||.||||
Sbjct 1739 TGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCTCCCAGGATGTGACCTACGCCCAGCTG 1812
Query 1246 CACAGCTTTACCCTCAGACAGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAG 1319
||||||||.|||||.||||.|||||||||||||||||||||||||||||||||||...||||||||||||||||
Sbjct 1813 CACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGAACCTCCAGCTGAGCCCAG 1886
Query 1320 TGTCTATGCCACTCTGGCCATCCAC 1344
..||||.||||||||||||||||||
Sbjct 1887 CATCTACGCCACTCTGGCCATCCAC 1911
