Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07730
- Subject:
- NR_103518.2
- Aligned Length:
- 2744
- Identities:
- 1238
- Gaps:
- 1357
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCAGCCTGGGCGGCACAGCCAGATGCGAGATGCGTCTCTGCTGATCTGAGTCTGCCTGCAGCATGGACCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTTCCCTGAAGCATCTCCAGGGCTGGAGGGACGACTGCCATGCACCGAGGGCTCATCCATCCACAGAGCAGGG 148
Query 1 -----------------ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCAGGACC 57
|||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 149 CAGTGGGAGGAGACGCCATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACC 222
Query 58 CACGTGCAGGCAGGGCACCTCCCCAAGCCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCATCCAGGGAAGTCC 131
||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||.||||||.|||||
Sbjct 223 CACGTGCAGGCAGGGCACCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCC 296
Query 132 TGTGACCCTCAGGTGTCAGGGGAGCCTTCAGGCTGAGGAGTACCATCTATATAGGGAAAACAAATCAGCATCCT 205
||||||||||||||||||||||.|||...||.|..|||||||||.|||||||||.|||||.|||.|||||.|||
Sbjct 297 TGTGACCCTCAGGTGTCAGGGGGGCCAGGAGACCCAGGAGTACCGTCTATATAGAGAAAAGAAAACAGCACCCT 370
Query 206 GGGTTAGACGGAT---ACAAGAGCCTGGGAAGAATGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACGCA 276
||.|||.|||||| |||.||||.||.||||||.||||||||||||||||||||||||||||||||||||.||
Sbjct 371 GGATTACACGGATCCCACAGGAGCTTGTGAAGAAGGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACACA 444
Query 277 GGGCGGTATCACTGTCAGTACTA---CAGCCACAATCACT-CA------TCAGAGTACAGTGACCCCCTGGAGC 340
||||||||||.|||| ||||| .|||.| |||| || ||||||..|||||||||||||||||
Sbjct 445 GGGCGGTATCGCTGT---TACTATGGTAGCGA----CACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGC 511
Query 341 TGGTGGTGACAGGAGCCTACAGCAAACCCACCCTCTCAGCTCTGCCCAGCCCTGTGGTGACCTTAGGAGGGAAC 414
|||||||||||||||||||||.||||||||||||||||||.|.|||||||||.|||||||.||.|||||||||.
Sbjct 512 TGGTGGTGACAGGAGCCTACATCAAACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAAT 585
Query 415 GTGACCCTCCAGTGTGTCTCACAGGTGGCATTTGACGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCC 488
||.|||||||||||||.||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 586 GTAACCCTCCAGTGTGACTCACAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCC 659
Query 489 ACAACGCCTGAACTCCCATTCCCATGCCCGTGGGTGGTCCTGGGCCATCTTCTCCGTGGGCCCCGTGAGCCCGA 562
||||.|||||||||||||..|||||||||||||||.||||.|.|||||||||||||||||||||||||||||||
Sbjct 660 ACAATGCCTGAACTCCCAGCCCCATGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGA 733
Query 563 GTCGCAGGTGGTCGTACAGGTGCTATGCTTATGACTCGAACTCTCCCTATGTGTGGTCTCTACCCAGTGATCTC 636
||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 734 GTCGCAGGTGGTGGTACAGGTGCTATGCTTATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTC 807
Query 637 CTGGAGCTCCTGGTCCCAGGTGTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATGGTGGCCCCTGG 710
||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||.||||||||||.
Sbjct 808 CTGGAGCTCCTGGTCCTAGGTGTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGA 881
Query 711 GGAGAGCCTGACCCTCCAGTGTGTCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGAGAACGTG 784
|||||.||||||.||.|||||||.||||||||..||||||.||||||||||||||||||||||.||.|||||||
Sbjct 882 GGAGACCCTGACTCTGCAGTGTGGCTCTGATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTG 955
Query 785 ACTTCCTCCAGCGCCCTGGTTGGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGC 858
|||||||.||||.|.||||....|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 956 ACTTCCTTCAGCTCGCTGGCGCACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGC 1029
Query 859 CCCTCCCACGGGGGCCAGTACAGATGCTACAGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCC 932
|.||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1030 CGCTCCTACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCC 1103
Query 933 CCTGGACATCCTGATCACAGGACAGTTCTATGACAGACCCTCTCTCTCGGTGCAGCCGGTCCCCACAGTAGCCC 1006
||||||||||||||||.||||||||||||||||||||..|||.||||||||||||||||.||||||.||.|||.
Sbjct 1104 CCTGGACATCCTGATCGCAGGACAGTTCTATGACAGAGTCTCCCTCTCGGTGCAGCCGGGCCCCACGGTGGCCT 1177
Query 1007 CAGGAAAGAACGTGACCCTGCTGTGTCAGTCACGGGGGCAGTTCCACACTTTCCTTCTGACCAAGGAGGGGGCA 1080
|||||.|||||||||||||||||||||||||||.|||...|.|.||.|||||||||||||||||||||||||||
Sbjct 1178 CAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGGATGGATGCAAACTTTCCTTCTGACCAAGGAGGGGGCA 1251
Query 1081 GGCCATCCCCCACTGCATCTGAGATCAGAGCACCAAGCTCAGCAGAACCAGGCTGAATTCCGCATGGGTCCTGT 1154
|...||..||||..||.|||.||||||..|.|||||.||||..|..|||||||||||||||.||||||||||||
Sbjct 1252 GCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCCCCATGGGTCCTGT 1325
Query 1155 GACCTCAGCCCACGTGGGGACCTACAGATGCTACAGCTCACTCAGCTCCAACCCCTACCTGCTGTCTCTCCCCA 1228
||||||||||||.|.||||||||||||.||||||.||||||..||||||||.||||||||||||.|||.|||||
Sbjct 1326 GACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCTCCAAACCCTACCTGCTGACTCACCCCA 1399
Query 1229 GTGACCCCCTGGAGCTCGTGGTCTCAG---------------------------------------------CA 1257
||||||||||||||||||||||||||| ||
Sbjct 1400 GTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTGGGGGCCCCAGCTCCCCGACAACAGGCCCCACCTCCACA 1473
Query 1258 T----CCCT-------AGGCCAACACCCCCA-------GGAT-TACACAGTG----GAGAA------------- 1295
| |||| ||.||..|||||||| |||| ..||.|||| |.|||
Sbjct 1474 TCTGGCCCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGATCCCCAGAGTGGTCTGGGAAGGCACCTGGGGGT 1547
Query 1296 TCTCATCCGCATGGGTGTGGCTGGCTTGGTCCTGGTGGTCCTCGGGATTCTGCTATT----------------- 1352
|.|.|||.||||....|||||.|.|.|..|.|||.|..|||||....|.||.||.||
Sbjct 1548 TGTGATCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCCTCCTCCTCCTCCTCTTCCTCATCCTCCGACATC 1621
Query 1353 ----TGAGG-------CT------------CAGCACAG----------CCAGAGAAG----CCTACAAGATGCA 1389
|.||| || ||||.||| |||| |||| ||| ..||||.
Sbjct 1622 GACGTCAGGGCAAACACTGGACATCGAGTCCAGCCCAGCTGCCGATGCCCAG-GAAGAAAACCT---CTATGCT 1691
Query 1390 GCCGGGAGG----------------------------------------------------------------- 1398
||||.||.|
Sbjct 1692 GCCGTGAAGCACACACAGCCTGAGGATGGGGTGGAGATGGACACTCGGAGCCCACACGATGAAGACCCCCAGGC 1765
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1766 AGTGACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTCTCCTCCTTCCCCACTGTCTGGGG 1839
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1840 AATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCC 1913
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1914 CCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCA 1987
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1988 GGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCATCCACTAGCCCAGGGGGGGACGCAGAC 2061
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2062 CCCACACTCCATGGAGTCTGGAATGCATGGGAGCTGCCCCCCCAGTGGACACCATTGGACCCCACCCAGCCTGG 2135
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2136 ATCTACCCCAGGAGACTCTGGGAACTTTTAGGGGTCACTCAATTCTGCAGTATAAATAACTAATGTCTCTACAA 2209
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2210 TTTTGAAATAAAGCAACAGACTTCTCAATAATCAATGAAGTAGCTGAGAAAACTAAGTCAGAAAGTGCATTAAA 2283
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2284 CTGAATCACAATGTAAATATTACACATCAAGCGATGAAACTGGAAAACTACAAGCCACGAATGAATGAATTAGG 2357
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2358 AAAGAAAAAAAGTAGGAAATGAATGATCTTGGCTTTCCTATAAGAAATTTAGGGCAGGGCACGGTGGCTCACGC 2431
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2432 CTGTAATTCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGTTCAGGAGATCGAGACCATCTTGGCCAAC 2505
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2506 ATGGTGAAACCCTGTCTCTCCTAAAAATACAAAAATTAGCTGGATGTGGTGGCAGTGCCTGTAATCCCAGCTAT 2579
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2580 TTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGGAGTCAGAGGTTTCAGTGAGCCAAGATCGCACCACTGC 2653
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2654 TCTCCAGCCTGGCGACAGAGGGAGACTCCATCTCAAATTAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAA 2727
Query 1399 ------ 1398
Sbjct 2728 AAAAAA 2733
