Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07730
Subject:
XM_011526331.2
Aligned Length:
2003
Identities:
1238
Gaps:
622

Alignment

Query    1  ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCAGGACCCACGTGCAGGCAGGGCA  74
            |||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct    1  ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCA  74

Query   75  CCTCCCCAAGCCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCATCCAGGGAAGTCCTGTGACCCTCAGGTGTC  148
            |||||||||||||||||||||||||||.||||||||||||||||.||||||.||||||||||||||||||||||
Sbjct   75  CCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTC  148

Query  149  AGGGGAGCCTTCAGGCTGAGGAGTACCATCTATATAGGGAAAACAAATCAGCATCCTGGGTTAGACGGAT---A  219
            |||||.|||...||.|..|||||||||.|||||||||.|||||.|||.|||||.|||||.|||.||||||   |
Sbjct  149  AGGGGGGCCAGGAGACCCAGGAGTACCGTCTATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCCCA  222

Query  220  CAAGAGCCTGGGAAGAATGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACGCAGGGCGGTATCACTGTCA  293
            ||.||||.||.||||||.||||||||||||||||||||||||||||||||||||.||||||||||||.||||  
Sbjct  223  CAGGAGCTTGTGAAGAAGGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTGT--  294

Query  294  GTACTA---CAGCCACAATCACT-CA------TCAGAGTACAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCC  357
             |||||   .|||.|    |||| ||      ||||||..||||||||||||||||||||||||||||||||||
Sbjct  295  -TACTATGGTAGCGA----CACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCC  363

Query  358  TACAGCAAACCCACCCTCTCAGCTCTGCCCAGCCCTGTGGTGACCTTAGGAGGGAACGTGACCCTCCAGTGTGT  431
            ||||.||||||||||||||||||.|.|||||||||.|||||||.||.|||||||||.||.|||||||||||||.
Sbjct  364  TACATCAAACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGA  437

Query  432  CTCACAGGTGGCATTTGACGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAACGCCTGAACTCCC  505
            ||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  438  CTCACAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCC  511

Query  506  ATTCCCATGCCCGTGGGTGGTCCTGGGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTCGTAC  579
            |..|||||||||||||||.||||.|.|||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  512  AGCCCCATGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTAC  585

Query  580  AGGTGCTATGCTTATGACTCGAACTCTCCCTATGTGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCC  653
            ||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.
Sbjct  586  AGGTGCTATGCTTATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCT  659

Query  654  AGGTGTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATGGTGGCCCCTGGGGAGAGCCTGACCCTCC  727
            |||||||||||||||||||||||||||||||||||||||||||||.||||||||||.|||||.||||||.||.|
Sbjct  660  AGGTGTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGC  733

Query  728  AGTGTGTCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGAGAACGTGACTTCCTCCAGCGCCCT  801
            ||||||.||||||||..||||||.||||||||||||||||||||||.||.||||||||||||||.||||.|.||
Sbjct  734  AGTGTGGCTCTGATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCT  807

Query  802  GGTTGGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCCCTCCCACGGGGGCCA  875
            ||....||||||||||||||||||||||||||||||||||||||||||||||||||||.||||.||||||||||
Sbjct  808  GGCGCACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCA  881

Query  876  GTACAGATGCTACAGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCA  949
            |||||||||||||.|||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||.
Sbjct  882  GTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCG  955

Query  950  CAGGACA------------GTTCTATGACAGACCC-------------TCTCTCTCGGTG-----CAGCCGGTC  993
            ||||..|            ||||..|.|..|||||             .|.||..|||.|     |||||||.|
Sbjct  956  CAGGTGAGGAGCCCAGCGGGTTCAGTCAGGGACCCAGGCTCCGCACAGGCCCTGCCGGGGGAGCTCAGCCGGGC  1029

Query  994  CCCACAGTAGCCCCAGGAAAGAACGTGACCCTGCTGTGTCAGTCACGGGGGCAGTTCCACACTTTCCTTCTGAC  1067
            |||||.||.|||.|||||.|||||||||||||||||||||||||||.|||...|.|.||.||||||||||||||
Sbjct 1030  CCCACGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGGATGGATGCAAACTTTCCTTCTGAC  1103

Query 1068  CAAGGAGGGGGCAGGCCATCCCCCACTGCATCTGAGATCAGAGCACCAAGCTCAGCAGAACCAGGCTGAATTCC  1141
            ||||||||||||||...||..||||..||.|||.||||||..|.|||||.||||..|..|||||||||||||||
Sbjct 1104  CAAGGAGGGGGCAGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCC  1177

Query 1142  GCATGGGTCCTGTGACCTCAGCCCACGTGGGGACCTACAGATGCTACAGCTCACTCAGCTCCAACCCCTACCTG  1215
            .||||||||||||||||||||||||.|.||||||||||||.||||||.||||||..||||||||.|||||||||
Sbjct 1178  CCATGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCTCCAAACCCTACCTG  1251

Query 1216  CTGTCTCTCCCCAGTGACCCCCTGGAGCTCGTGGTCTCAG----------------------------------  1255
            |||.|||.||||||||||||||||||||||||||||||||                                  
Sbjct 1252  CTGACTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTGGGGGCCCCAGCTCCCCGACAACAGG  1325

Query 1256  -----------CAT-------CCCT-------AGGCCAACACCCCCA-------GGAT-TACACAGTGGAGAAT  1296
                       |||       ||||       ||.||..||||||||       |||| ..||.|||||    |
Sbjct 1326  CCCCACCTCCACATCTGCAGGCCCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGATCCCCAGAGTGG----T  1395

Query 1297  CT-------CATCCGCATGGG---TGTGGCTGG---CTTGG---------TCCTGGTGGTCCTC----------  1338
            ||       ||    |.||||   ||||...||   |||||         ||||..||.|||||          
Sbjct 1396  CTGGGAAGGCA----CCTGGGGGTTGTGATCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCCTCCTCCTCC  1465

Query 1339  -------------------------------GGG---ATTCT--------------------GCT-ATTT----  1353
                                           |||   |..||                    ||| ||||    
Sbjct 1466  TCCTCTTCCTCATCCTCCGACATCGACGTCAGGGCAAACACTGGACATCGACCCAGAGAAAGGCTGATTTCCAA  1539

Query 1354  ---------GAGGCT-------CAG----CACAGCCAGAGAAGCCTACA----AGATGCAGCCGGG--------  1395
                     |.||||       |||    |||||.|||||  ||||.||    ||.|.|||||..|        
Sbjct 1540  CATCCTGCAGGGGCTGTGGGGCCAGAGCCCACAGACAGAG--GCCTGCAGTGGAGGTCCAGCCCAGCTGCCGAT  1611

Query 1396  ----AGG-------------------------------------------------------------------  1398
                |||                                                                   
Sbjct 1612  GCCCAGGAAGAAAACCTCTATGCTGCCGTGAAGCACACACAGCCTGAGGATGGGGTGGAGATGGACACTCGGCA  1685

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1686  GAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGAGAAATGG  1759

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1760  CCTCTCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATG  1833

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1834  GACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACG  1907

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1908  GGAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCA  1981

Query 1399  -----  1398
                 
Sbjct 1982  TCCAC  1986

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