Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07803
Subject:
XM_011534841.3
Aligned Length:
2502
Identities:
2405
Gaps:
96

Alignment

Query    1  ATGGCGGTGGAGGACGAGGGGCTCCGGGTCTTCCAGAGCGTGAAGATCAAGATCGGTGAAGCCAAAAACCTTCC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTCTTACCCGGGGCCGAGCAAGATGAGGGATTGCTACTGCACGGTGAACCTGGACCAGGAGGAGGTTTTCAGGA  148
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ----------------------ATGAGGGATTGCTACTGCACGGTGAACCTGGACCAGGAGGAGGTTTTCAGGA  52

Query  149  CCAAAATTGTGGAAAAGTCACTCTGCCCGTTTTACGGAGAAGACTTTTACTGTGAAATTCCTCGGAGCTTTCGT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   53  CCAAAATTGTGGAAAAGTCACTCTGCCCGTTTTACGGAGAAGACTTTTACTGTGAAATTCCTCGGAGCTTTCGT  126

Query  223  CACCTGTCCTTCTACATTTTCGATAGAGACGTTTTCCGGAGGGATTCCATCATAGGGAAGGTGGCCATCCAGAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  127  CACCTGTCCTTCTACATTTTCGATAGAGACGTTTTCCGGAGGGATTCCATCATAGGGAAGGTGGCCATCCAGAA  200

Query  297  GGAGGACTTGCAGAAGTACCACAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGACGCTGACTCGGAAGTGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  201  GGAGGACTTGCAGAAGTACCACAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGACGCTGACTCGGAAGTGC  274

Query  371  AGGGCAAAGTGCACCTGGAGCTGCGGCTGAGCGAGGTCATCACAGACACTGGGGTCGTCTGCCACAAGCTCGCC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  275  AGGGCAAAGTGCACCTGGAGCTGCGGCTGAGCGAGGTCATCACAGACACTGGGGTCGTCTGCCACAAGCTCGCC  348

Query  445  ACACGCATCGTCGAGTGCCAGGGCCTCCCCATCGTGAATGGGCAATGTGACCCCTACGCCACCGTGACGCTGGC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  349  ACACGCATCGTCGAGTGCCAGGGCCTCCCCATCGTGAATGGGCAATGTGACCCCTACGCCACCGTGACGCTGGC  422

Query  519  AGGACCCTTCAGATCAGAAGCAAAGAAGACGAAAGTGAAGAGGAAGACCAACAATCCCCAGTTCGATGAAGTGT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  423  AGGACCCTTCAGATCAGAAGCAAAGAAGACGAAAGTGAAGAGGAAGACCAACAATCCCCAGTTCGATGAAGTGT  496

Query  593  TTTATTTTGAGGTGACCCGGCCCTGTAGCTACAGCAAGAAGTCCCACTTTGACTTTGAGGAGGAAGACGTGGAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  497  TTTATTTTGAGGTGACCCGGCCCTGTAGCTACAGCAAGAAGTCCCACTTTGACTTTGAGGAGGAAGACGTGGAC  570

Query  667  AAGCTCGAAATCAGAGTTGACCTCTGGAATGCCAGTAACCTGAAGTTTGGAGATGAATTCCTGGGAGAACTAAG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  571  AAGCTCGAAATCAGAGTTGACCTCTGGAATGCCAGTAACCTGAAGTTTGGAGATGAATTCCTGGGAGAACTAAG  644

Query  741  GATCCCGTTGAAAGTCCTGCGGCAGTCCAGCTCCTACGAGGCGTGGTACTTCCTCCAGCCCCGGGACAATGGTA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  645  GATCCCGTTGAAAGTCCTGCGGCAGTCCAGCTCCTACGAGGCGTGGTACTTCCTCCAGCCCCGGGACAATGGTA  718

Query  815  GCAAGAGCCTAAAGCCAGACGACCTGGGCTCCCTGCGGCTGAACGTGGTATACACGGAAGACCACGTGTTTTCT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  719  GCAAGAGCCTAAAGCCAGACGACCTGGGCTCCCTGCGGCTGAACGTGGTATACACGGAAGACCACGTGTTTTCT  792

Query  889  TCTGACTATTACAGCCCTCTGCGGGACCTGCTGTTGAAGTCTGCGGATGTGGAGCCCGTGTCAGCGTCTGCGGC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  793  TCTGACTATTACAGCCCTCTGCGGGACCTGCTGTTGAAGTCTGCGGATGTGGAGCCCGTGTCAGCGTCTGCGGC  866

Query  963  CCACATCCTGGGCGAGGTTTGCCGGGAGAAGCAGGAGGCGGCCGTCCCGCTGGTGCGGCTCTTCCTACACTATG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  867  CCACATCCTGGGCGAGGTTTGCCGGGAGAAGCAGGAGGCGGCCGTCCCGCTGGTGCGGCTCTTCCTACACTATG  940

Query 1037  GCAGGGTGGTGCCATTCATCAGTGCCATCGCCAGCGCGGAGGTGAAGCGGACCCAGGACCCCAACACCATCTTC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  941  GCAGGGTGGTGCCATTCATCAGTGCCATCGCCAGCGCGGAGGTGAAGCGGACCCAGGACCCCAACACCATCTTC  1014

Query 1111  CGAGGAAACTCACTGGCGTCCAAGTGCATCGACGAGACCATGAAGCTGGCGGGGATGCATTACCTGCATGTCAC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015  CGAGGAAACTCACTGGCGTCCAAGTGCATCGACGAGACCATGAAGCTGGCGGGGATGCATTACCTGCATGTCAC  1088

Query 1185  CCTGAAGCCCGCCATCGAGGAGATATGCCAGAGCCACAAACCCTGTGAAATCGACCCTGTGAAGTTGAAAGACG  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1089  CCTGAAGCCCGCCATCGAGGAGATATGCCAGAGCCACAAACCCTGTGAAATCGACCCTGTGAAGTTGAAAGACG  1162

Query 1259  GAGAAAACCTTGAAAACAACATGGAGAACCTACGGCAGTATGTGGACCGCGTCTTCCACGCCATCACCGAGTCT  1332
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1163  GAGAAAACCTTGAAAACAACATGGAGAACCTACGGCAGTATGTGGACCGCGTCTTCCACGCCATCACTGAGTCT  1236

Query 1333  GGGGTGAGCTGCCCGACCGTCATGTGTGACATCTTCTTCTCCCTCCGGGAGGCGGCGGCCAAGCGCTTCCAGGA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1237  GGGGTGAGCTGCCCGACCGTCATGTGTGACATCTTCTTCTCCCTCCGGGAGGCGGCGGCCAAGCGCTTCCAGGA  1310

Query 1407  TGACCCGGACGTCAGGTACACTGCAGTGAGCAGCTTCATCTTCCTGAGGTTCTTTGCGCCCGCCATTCTCTCCC  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1311  TGACCCGGACGTCAGGTACACTGCAGTGAGCAGCTTCATCTTCCTGAGGTTCTTTGCGCCCGCCATTCTCTCCC  1384

Query 1481  CCAACCTCTTCCAGCTCACGCCGCACCACACGGACCCCCAGACGTCCAGGACGCTGACATTGATCTCCAAGACC  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1385  CCAACCTCTTCCAGCTCACGCCGCACCACACGGACCCCCAGACGTCCAGGACGCTGACATTGATCTCCAAGACC  1458

Query 1555  GTTCAGACCCTCGGCAGCCTGTCCAAGTCCAAATCTGCGAGTTTTAAGGAGTCCTACATGGCTACATTTTATGA  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1459  GTTCAGACCCTCGGCAGCCTGTCCAAGTCCAAATCTGCGAGTTTTAAGGAGTCCTACATGGCTACATTTTATGA  1532

Query 1629  ATTCTTCAATGAGCAGAAATATGCTGATGCGGTGAAGAACTTCTTGGATCTGATTTCGTCCTCGGGGAGAAGAG  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1533  ATTCTTCAATGAGCAGAAATATGCTGATGCGGTGAAGAACTTCTTGGATCTGATTTCGTCCTCGGGGAGAAGAG  1606

Query 1703  ACCCCAAGAGTGTTGAGCAGCCCATCGTGCTTAAAGAAGGGTTCATGATCAAGAGGGCCCAAGGACGGAAGCGC  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1607  ACCCCAAGAGTGTTGAGCAGCCCATCGTGCTTAAAGAAGGGTTCATGATCAAGAGGGCCCAAGGACGGAAGCGC  1680

Query 1777  TTTGGGATGAAGAATTTTAAGAAGAGATGGTTTCGCTTGACCAACCATGAATTTACCTACCACAAAAGCAAAGG  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1681  TTTGGGATGAAGAATTTTAAGAAGAGATGGTTTCGCTTGACCAACCATGAATTTACCTACCACAAAAGCAAAGG  1754

Query 1851  GGACCAGCCTCTCTACAGCATTCCCATCGAGAACATCCTGGCAGTGGAGAAGCTGGAGGAGGAGTCTTTCAAAA  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1755  GGACCAGCCTCTCTACAGCATTCCCATCGAGAACATCCTGGCAGTGGAGAAGCTGGAGGAGGAGTCTTTCAAAA  1828

Query 1925  TGAAAAACATGTTCCAGGTCATCCAGCCAGAGCGTGCGCTGTACATCCAGGCCAACAACTGCGTGGAGGCCAAG  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1829  TGAAAAACATGTTCCAGGTCATCCAGCCAGAGCGTGCGCTGTACATCCAGGCCAACAACTGCGTGGAGGCCAAG  1902

Query 1999  GACTGGATCGACATTCTCACCAAAGTGAGCCAGTGCAACCAGAAGCGCCTCACCGTCTACCACCCGTCCGCCTA  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1903  GACTGGATCGACATTCTCACCAAAGTGAGCCAGTGCAACCAGAAGCGCCTCACCGTCTACCACCCGTCCGCCTA  1976

Query 2073  CCTGAGCGGCCACTGGCTGTGCTGTAGGGCGCCATCCGACTCGGCTCCGGGCTGCTCGCCCTGCACTGGCGGCC  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1977  CCTGAGCGGCCACTGGCTGTGCTGTAGGGCGCCATCCGACTCGGCTCCGGGCTGCTCGCCCTGCACTGGCGGCC  2050

Query 2147  TCCCAGCCAACATCCAGCTGGACATTGATGGGGACCGTGAGACGGAGCGTATCTACTCCCTCTTCAACTTGTAC  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2051  TCCCAGCCAACATCCAGCTGGACATTGATGGGGACCGTGAGACGGAGCGTATCTACTCCCTCTTCAACTTGTAC  2124

Query 2221  ATGAGCAAGCTGGAGAAGATGCAGGAGGCCTGTGGGAGCAAATCTGTGTATGACGGCCCGGAGCAGGAGGAGTA  2294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2125  ATGAGCAAGCTGGAGAAGATGCAGGAGGCCTGTGGGAGCAAATCTGTGTATGACGGCCCGGAGCAGGAGGAGTA  2198

Query 2295  TTCGACGTTCGTCATTGACGACCCCCAGGAGACCTACAAGACGCTAAAGCAAGTCATCGCTGGGGTTGGGGCTT  2368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2199  TTCGACGTTCGTCATTGACGACCCCCAGGAGACCTACAAGACGCTAAAGCAAGTCATCGCTGGGGTTGGGGCTT  2272

Query 2369  TGGAGCAGGAGCACGCCCAGTATAAGAGGGACAAGTTCAAGAAGACGAAATATGGAAGCCAGGAGCACCCCATC  2442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2273  TGGAGCAGGAGCACGCCCAGTATAAGAGGGACAAGTTCAAGAAGACGAAATATGGAAGCCAGGAGCACCCCATC  2346

Query 2443  GGAGACAAGAGCTTCCAGAACTACATCCGGCAGCAGTCCGAGACCTCCACTCATTCCATT  2502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2347  GGAGACAAGAGCTTCCAGAACTACATCCGGCAGCAGTCCGAGACCTCCACTCATTCCATT  2406

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