Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_07829
• Subject: XR_001740061.1
• Aligned Length: 1550
• Identities: 854
• Gaps: 682

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTCGGCCATCGCAAGGGGTTGGGGTTGGCTTTTTTTCGGGCAACTGCTCACAGCTCCCAGTAATCACTTCCATC  74

Query    1  --------------------------------ATGG---CGTCCGTGACGCTGAGCGA----GGCGGAGAAGGT  35
                                            .|||   |||||| |.|.|||.|| |    |.|.|.|..|||
Sbjct   75  AAGCCGGGGTTTCCAGTTCCCGCTAGGAAGCGTTGGGGACGTCCG-GGCACTGCGC-ACCTCGCCAGTGCCGGT  146

Query   36  GTAC--ATCG--------------TGCATGG-----CGTCCAGGAAGACCTCCGTGTGGATGGCCGTGGCTGTG  88
             |||  |.||              ||  |||     ||..|.||||||||||||||||||||||||||||||||
Sbjct  147  -TACCAAGCGCCTCCTCCCCCGTCTG--TGGGACAACGCTCTGGAAGACCTCCGTGTGGATGGCCGTGGCTGTG  217

Query   89  AGGACTACCGATGTGTCGAAGTGGAAACTGATGTGGTGTCCAACACTAGTGGGTCCGCCAGGGTCAAGCTGGGT  162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  218  AGGACTACCGATGTGTCGAAGTGGAAACTGATGTGGTGTCCAACACTAGTGGGTCCGCCAGGGTCAAGCTGGGT  291

Query  163  CACACAGACATCTTGGTGGGAGTGAAAGCAGAAATGGGGACGCCGAAGCTGGAGAAACCAAATGAAGGCTACTT  236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  292  CACACAGACATCTTGGTGGGAGTGAAAGCAGAAATGGGGACGCCGAAGCTGGAGAAACCAAATGAAGGCTACTT  365

Query  237  GGAGTTCTTTGTTGACTGTTCAGCCAGTGCTACCCCTGAATTTGAAGGTAGAGGAGGTGATGACCTTGGCACCG  310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  366  GGAGTTCTTTGTTGACTGTTCAGCCAGTGCTACCCCTGAATTTGAAGGTAGAGGAGGTGATGACCTTGGCACCG  439

Query  311  AGATCGCTAACACCCTCTATCGGATATTTAACAATAAAAGCAGTGTCGACTTAAAGACCCTCTGCATTAGTCCT  384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  440  AGATCGCTAACACCCTCTATCGGATATTTAACAATAAAAGCAGTGTCGACTTAAAGACCCTCTGCATTAGTCCT  513

Query  385  CGGGAGCACTGCTGGGTTCTCTATGTGGATGTGCTGCTTCTGGAATGTGGTGGAAATTTGTTTGATGCCATTTC  458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  514  CGGGAGCACTGCTGGGTTCTCTATGTGGATGTGCTGCTTCTGGAATGTGGTGGAAATTTGTTTGATGCCATTTC  587

Query  459  CATTGCTGTAAAGGCTGCTCTCTTCAATACAAGGATACCAAGGGTTCGAGTTTTGGAGGATGAAGAGGGGTCGA  532
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  588  CATTGCTGTAAAGGCTGCTCTCTTCAATACAAGGATACCAAGGGTTCGAGTTTTGGAGGATGAAGAGGGGTCGA  661

Query  533  AGGACATTGAATTGTCAGATGACCCTTATGACTGCATACGACTAAGTGTGGAGAATGTCCCCTGCATTGTCACT  606
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  662  AGGACATTGAATTGTCAGATGACCCTTATGACTGCATACGACTAAGTGTGGAGAATGTCCCCTGCATTGTCACT  735

Query  607  CTGTGCAAGATTGGCTATCGGCATGTGGTGGATGCTACTCTTCAGGAGGAGGCCTGCTCGCTGGCCAGCTTGCT  680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  736  CTGTGCAAGATTGGCTATCGGCATGTGGTGGATGCTACTCTTCAGGAGGAGGCCTGCTCGCTGGCCAGCTTGCT  809

Query  681  GGTGTCGGTGACCAGCAAGGGAGTTGTGACGTGCATGAGGAAAGTGGGGAAGGGCAGCCTGGACCCAGAGAGCA  754
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  810  GGTGTCGGTGACCAGCAAGGGAGTTGTGACGTGCATGAGGAAAGTGGGGAAGGGCAGCCTGGACCCAGAGAGCA  883

Query  755  TCTTCGAGATGATGGAGACTGGCAAGCGTGTGGGCAAGGTACTGCATGCCTCCTTGCAGAGTGTTCTGCACAAG  828
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct  884  TCTTCGAGATGATGGAGACTGGCAAGCGTGTGGGCAAGGTACTGCATGCCTCCTTGCAGAGTGTTGTGCACAAG  957

Query  829  GAAGAAAGCCTGGGGCCCAAGAGACAGAAAGTTGGATTCCTGGGA-----------------------------  873
            |||||||||||||||||||||||||||||||||||||||||||||                             
Sbjct  958  GAAGAAAGCCTGGGGCCCAAGAGACAGAAAGTTGGATTCCTGGGATGATTTGCACATCAACTGCTCAACTGTGG  1031

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1032  ATTGTTTTTTACTTTTCCTTTTAAACCGGGGAACTGAAACTCCTAAATCTTAAAACACCCTGGGGAAGGAGCTG  1105

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1106  ATTCACGAAGGAGAGCGTTTCAACCGTGGCATTTGCTCTCTGCATTCCAGTTAGCAAATGGGGTAAGGCGTTAG  1179

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1180  GAATTTATCACCAAATGGAAAGAACATAATGTGAGCTGAAGCCCTTGGGACTGCTTCCAGAGGTCCTGGTGTGG  1253

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1254  GCGTTCCTCCCAGCAAGGCCAGGTCCATCCCTGTGGAGAGAAGCAGCTGCCTAGACTTGGGCTTAATGGGGGAG  1327

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1328  CTTCTGCCCTGTTGAGAGCATAGCCTGGGTTTTCATCTTTTATGTTTCTTCAGTGACTATCTACAGGCACCATG  1401

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1402  ACAGTGTTCCCAACAAGGCAGAAATCAGCCTGGTCTCTCCTTCCCTGCTCCTGGTTGACTGCCCGTGACATGAC  1475

Query  874  ----------------------------------------------------------------------  873
                                                                                  
Sbjct 1476  AAAACATTGGCAGTGGTGGCGCAGAGATGCAACTCGAGTGTGAATAAAGTTTAGAAGCATTTGCTTTTGA  1545