Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_07836
• Subject: XR_001742045.2
• Aligned Length: 3292
• Identities: 2133
• Gaps: 1119

Alignment

Query    1  --------------------------------------------------------------------ATGGG-  5
                                                                                .|||| 
Sbjct    1  CTTTTGCGTTCAGGGATGGTCGGGAGGTGACCCAGCGCGGGTGGTGCTCTGGGGCAGCGCGGGTGGGCGTGGGC  74

Query    6  --GC--------------TCCCAGC------GCTCGAGTTC--AGCG-ACTGCTGCCTCGATAGTCCGCACTTC  54
              ||              |||||||      ||..||||.|  |||| .|.||.|||     ||...|||..||
Sbjct   75  GTGCGCGGCACGCAGGTGTCCCAGCAGTGGGGCCAGAGTGCCGAGCGCGCCGCAGCC-----AGCGGGCAGATC  143

Query   55  CGA--GAGAC----GCTCAAGTCGCAC---GAAGCAGAGCTGGACA--------AGACCAAC-----AAATTCA  106
            |.|  |.|.|    ||||.|| |.|.|   |..||||||.||..||        .|.|||||     .|||   
Sbjct  144  CCATCGTGTCCACAGCTCCAG-CTCCCTTAGGGGCAGAGTTGCTCAGCCTTGAGTGCCCAACCGTGAGAAT---  213

Query  107  TCAAGGAGCTCATCAAG---------GACGGGAAGTCACTCATAAGCGC--GCTC----------AAGAATTTG  159
                |||||       |         ||.|||             ||||  .|||          ||| |||||
Sbjct  214  ----GGAGC-------GTGCCCTGCCGAGGGG-------------GCGCTGCCTCCCCTTGGGAAAAG-ATTTG  262

Query  160  TCTTCAGCGAAGCGGAAGTTTGCAGATTCCTTAAATGAATTTAAATTTCAGTGCATAGGAGATGCAGAAACAGA  233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  263  TCTTCAGCGAAGCGGAAGTTTGCAGATTCCTTAAATGAATTTAAATTTCAGTGCATAGGAGATGCAGAAACAGA  336

Query  234  TGATGAGATGTGTATAGCAAGGTCTTTGCAGGAGTTTGCCACTGTCCTCAGGAATCTTGAAGATGAACGGATAC  307
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  337  TGATGAGATGTGTATAGCAAGATCTTTGCAGGAGTTTGCCACTGTCCTCAGGAATCTTGAAGATGAACGGATAC  410

Query  308  GGATGATTGAGAATGCCAGCGAGGTGCTCATCACTCCCTTGGAGAAGTTTCGAAAGGAACAGATCGGGGCTGCC  381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  411  GGATGATTGAGAATGCCAGCGAGGTGCTCATCACTCCCTTGGAGAAGTTTCGAAAGGAACAGATCGGGGCTGCC  484

Query  382  AAGGAAGCCAAAAAGAAGTATGACAAAGAGACAGAAAAGTATTGTGGCATCTTAGAAAAACACTTGAATTTGTC  455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  485  AAGGAAGCCAAAAAGAAGTATGACAAAGAGACAGAAAAGTATTGTGGCATCTTAGAAAAACACTTGAATTTGTC  558

Query  456  TTCCAAAAAGAAAGAATCTCAGCTTCAGGAGGCAGACAGCCAAGTGGACCTGGTCCGGCAGCATTTCTATGAAG  529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  559  TTCCAAAAAGAAAGAATCTCAGCTTCAGGAGGCAGACAGCCAAGTGGACCTGGTCCGGCAGCATTTCTATGAAG  632

Query  530  TATCCCTGGAATATGTCTTCAAGGTGCAGGAAGTCCAAGAGAGAAAGATGTTTGAGTTTGTGGAGCCTCTGCTG  603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  633  TATCCCTGGAATATGTCTTCAAGGTGCAGGAAGTCCAAGAGAGAAAGATGTTTGAGTTTGTGGAGCCTCTGCTG  706

Query  604  GCCTTCCTGCAAGGACTCTTCACTTTCTATCACCATGGTTACGAACTGGCCAAGGATTTCGGGGACTTCAAGAC  677
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  707  GCCTTCCTGCAAGGACTCTTCACTTTCTATCACCATGGTTACGAACTGGCCAAGGATTTCGGGGACTTCAAGAC  780

Query  678  ACAGTTAACCATTAGCATACAGAACACAAGAAATCGCTTTGAAGGCACTAGATCAGAAGTGGAATCACTGATGA  751
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  781  ACAGTTAACCATTAGCATACAGAACACAAGAAATCGCTTTGAAGGCACTAGATCAGAAGTGGAATCACTGATGA  854

Query  752  AAAAGATGAAGGAGAATCCCCTTGAGCACAAGACCATCAGTCCCTACACCATGGAGGGATACCTCTACGTGCAG  825
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  855  AAAAGATGAAGGAGAATCCCCTTGAGCACAAGACCATCAGTCCCTACACCATGGAGGGATACCTCTACGTGCAG  928

Query  826  GAGAAACGTCACTTTGGAACTTCTTGGGTGAAGCACTACTGTACATATCAACGGGATTCCAAACAAATCACCAT  899
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  929  GAGAAACGTCACTTTGGAACTTCTTGGGTGAAGCACTACTGTACATATCAACGGGATTCCAAACAAATCACCAT  1002

Query  900  GGTACCATTTGACCAAAAGTCAGGAGGAAAAGGGGGAGAAGATGAATCAGTTATCCTCAAATCCTGCACACGGC  973
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1003  GGTACCATTTGACCAAAAGTCAGGAGGAAAAGGGGGAGAAGATGAATCAGTTATCCTCAAATCCTGCACACGGC  1076

Query  974  GGAAAACAGACTCCATTGAGAAGAGGTTTTGCTTTGATGTGGAAGCAGTAGACAGGCCAGGGGTTATCACCATG  1047
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077  GGAAAACAGACTCCATTGAGAAGAGGTTTTGCTTTGATGTGGAAGCAGTAGACAGGCCAGGGGTTATCACCATG  1150

Query 1048  CAAGCTTTGTCGGAAGAGGACCGGAGGCTCTGGATGGAAGCCATGGATGGCCGGGAACCTGTCTACAACTCGAA  1121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1151  CAAGCTTTGTCGGAAGAGGACCGGAGGCTCTGGATGGAAGCCATGGATGGCCGGGAACCTGTCTACAACTCGAA  1224

Query 1122  CAAAGACAGCCAGAGTGAAGGGACTGCGCAGTTGGACAGCATTGGCTTCAGCATAATCAGGAAATGCATCCATG  1195
            |||||||||||||||||||||||                                                   
Sbjct 1225  CAAAGACAGCCAGAGTGAAGGGA---------------------------------------------------  1247

Query 1196  CTGTGGAAACCAGAGGGATCAACGAGCAAGGGCTGTATCGAATTGTGGGGGTCAACTCCAGAGTGCAGAAGTTG  1269
                           ||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1248  ---------------GGATCAACGAGCAAGGGCTGTATCGAATTGTGGGTGTCAACTCCAGAGTGCAGAAGTTG  1306

Query 1270  CTGAGTGTCCTGATGGACCCCAAGACTGCTTCTGAGACAGAAACAGATATCTGTGCTGAATGGGAGATAAAGAC  1343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1307  CTGAGTGTCCTGATGGACCCCAAGACTGCTTCTGAGACAGAAACAGATATCTGTGCTGAATGGGAGATAAAGAC  1380

Query 1344  CATCACTAGTGCTCTGAAGACCTACCTAAGAATGCTTCCAGGACCACTCATGATGTACCAGTTTCAAAGAAGTT  1417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381  CATCACTAGTGCTCTGAAGACCTACCTAAGAATGCTTCCAGGACCACTCATGATGTACCAGTTTCAAAGAAGTT  1454

Query 1418  TCATCAAAGCAGCAAAACTGGAGAACCAGGAGTCTCGGGTCTCTGAAATCCACAGCCTTGTTCATCGGCTCCCA  1491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1455  TCATCAAAGCAGCAAAACTGGAGAACCAGGAGTCTCGGGTCTCTGAAATCCACAGCCTTGTTCATCGGCTCCCA  1528

Query 1492  GAGAAAAATCGGCAGATGTTACAGCTGCTCATGAACCACTTGGCAAATGTTGCTAACAACCACAAGCAGAATTT  1565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1529  GAGAAAAATCGGCAGATGTTACAGCTGCTCATGAACCACTTGGCAAATGTTGCTAACAACCACAAGCAGAATTT  1602

Query 1566  GATGACGGTGGCAAACCTTGGTGTGGTGTTTGGACCCACTCTGCTGAGGCCTCAGGAAGAAACAGTAGCAGCCA  1639
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1603  GATGACGGTGGCAAACCTTGGTGTGGTGTTTGGACCCACTCTGCTGAGGCCTCAGGAAGAAACAGTAGCAGCCA  1676

Query 1640  TCATGGACATCAAATTTCAGAACATTGTCATTGAGATCCTAATAGAAAACCACGAAAAGATATTTAACACCGTG  1713
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1677  TCATGGACATCAAATTTCAGAACATTGTCATTGAGATCCTAATAGAAAACCACGAAAAGATATTTAACACCGTG  1750

Query 1714  CCCGATATGCCTCTCACCAATGCCCAGCTGCACCTGTCTCGGAAGAAGAGCAGTGACTCCAAGCCCCCGTCCTG  1787
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1751  CCCGATATGCCTCTCACCAATGCCCAGCTGCACCTGTCTCGGAAGAAGAGCAGTGACTCCAAGCCCCCGTCCTG  1824

Query 1788  CAGCGAGAGGCCCCTGACGCTCTTCCACACCGTTCAGTCAACAGAGAAACAGGAACAAAGGAACAGCATCATCA  1861
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1825  CAGCGAGAGGCCCCTGACGCTCTTCCACACCGTTCAGTCAACAGAGAAACAGGAACAAAGGAACAGCATCATCA  1898

Query 1862  ACTCCAGTTTGGAATCTGTCTCATCAAATCCAAACAGCATCCTTAATTCCAGCAGCAGCTTACAGCCCAACATG  1935
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1899  ACTCCAGTTTGGAATCTGTCTCATCAAATCCAAACAGCATCCTTAATTCCAGCAGCAGCTTACAGCCCAACATG  1972

Query 1936  AACTCCAGTGACCCAGACCTGGCTGTGGTCAAACCCACCCGGCCCAACTCAC----------------------  1987
            ||||||||||||||||||||||||||||||||||||||||||||||||||||                      
Sbjct 1973  AACTCCAGTGACCCAGACCTGGCTGTGGTCAAACCCACCCGGCCCAACTCACTGGTTCATGCGAGTTCAGCAAG  2046

Query 1988  ----------------------------------------------------TCCCCCCGAATCCAAGCCCAAC  2009
                                                                ||||||||||||||||||||||
Sbjct 2047  CAGTTACCATGTCTACGGCATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTCCCCCCGAATCCAAGCCCAAC  2120

Query 2010  TTCACCCCTCTCGCCATCTTGGCCCATGTTCTCGGCGCCATCCAGCCCTATGCCCACCTCATCCACGTCCAGCG  2083
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2121  TTCACCCCTCTCGCCATCTTGGCCCATGTTCTCGGCGCCATCCAGCCCTATGCCCACCTCATCCACGTCCAGCG  2194

Query 2084  ACTCATCCCCCGT-------------------------------------------------------------  2096
            |||||||||||||                                                             
Sbjct 2195  ACTCATCCCCCGTCAGGTCTGTTGCAGGGTTTGTTTGGTTTTCTGTTGCTGCCGTTGTTCTCTCATTGGCTCGG  2268

Query 2097  --------------------------------------------------------------------------  2096
                                                                                      
Sbjct 2269  TCCTCTCTTCATGCAGTGTTCAGCCTCCTCGTCAACTTTGTTCCCTGCCATCCAAACCTGCACTTGCTTTTTGA  2342

Query 2097  ------------------------------CAGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAG  2140
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2343  CAGGCCAGAAGAAGCGGTACATGAAGACTCCAGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAG  2416

Query 2141  CTGAACATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCTTCGATA--------------------------  2188
            ||||||||||||||||||||||||||||||||||||||||||||||||                          
Sbjct 2417  CTGAACATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCTTCGATAACGCAGAGTGTCCTTCAGCTTCCACA  2490

Query 2189  ---ATGTTCAC--CCA-------------------------TCTCAGGAGCCTGG---------CTGG------  2217
               ||.|||||  |||                         |||||    |||||         ||||      
Sbjct 2491  GCCATCTTCACTGCCACACCGAAGCTCCGGGCACCTCCACCTCTCA----CCTGGGCACTTCCACTGGCCGCCT  2560

Query 2218  -----------------------TTG-------------------------------GAGGGGACTCTG---AA  2234
                                   |||                               |||.|..||.||   ||
Sbjct 2561  GACACATCTTCTCACATCTGCTCTTGCTGCCATAACCCCCTCTTTACAGAGCAGCGAGAGTGATCTTTGAAAAA  2634

Query 2235  CGGAAA----------------GACTGGCCT--CAT--CCCTGAGAATTACGT----GG-------------AG  2271
            ||||||                .|.||||||  |||  |.|||||||||||.|    ||             ||
Sbjct 2635  CGGAAATGGCATTAAAGCCCTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCTCCAGGGCCCAG  2708

Query 2272  TTCCTC--------------------------------------------------------------------  2277
            |||||.                                                                    
Sbjct 2709  TTCCTGCCCCTCTGACCTCACGCCCTCACTTGACATACTACAGCCTCATGCCTTCTTCATGTTCTCAAGCAAGG  2782

Query 2278  --------------------------------------------------------------------------  2277
                                                                                      
Sbjct 2783  TCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCACCTGTCACCTAACAATTCTGTAACTGCTCCCACAT  2856

Query 2278  --------------------------------------------------------------------------  2277
                                                                                      
Sbjct 2857  ACAACATGGTCGTCATCATAAATCCTATAGGTATTGTTGAGAGCAGGAGGAAAGTTTGGTTGAGTGAGTGAGAG  2930

Query 2278  --------------------------------------------------------------------------  2277
                                                                                      
Sbjct 2931  ACCTTACCCAAGCCTTCCTGTGGTCTCTAGGAGTCATGGCAGAGTTCGCTGACACTGGTCTGCTTTTAACCAGC  3004

Query 2278  --------------------------------------------------------------------------  2277
                                                                                      
Sbjct 3005  CTTGCCAGTGACCTTTCAAATTCCCTGAGGAGCAAAAGGCCAAATTGAACCTGAAAGAAAACACCTCTCAGTGT  3078

Query 2278  --------------------------------------------------------------------------  2277
                                                                                      
Sbjct 3079  TGACTGAGTTGCAGTAGAAAATGGACCTGACAAAACTTCACCCATCTCAGGAGCCTGGCTGGTTGGAGGGGACT  3152

Query 2278  ------------------------------------  2277
                                                
Sbjct 3153  CTGAACGGAAAGACTGGCCTCATCCCTGAGAATTAC  3188