Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07902
- Subject:
- XM_006529678.3
- Aligned Length:
- 2797
- Identities:
- 1289
- Gaps:
- 1349
Alignment
Query 1 ATGCTGCTGTTCTTTACTTTGGGATTGCTTATACATTTTGTGTTCTTCGCCTCCATCTTTGACATTTATTTTAC 74
|||||||||||.|||.||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||
Sbjct 1 ATGCTGCTGTTTTTTGCTTTGGGATTGCTTATCCATTTTGTGTTCTTCGCTTCCATCTTTGACATTTATTTTAC 74
Query 75 ATCTCCTTTGGTTCATGGAATGACTCCTCAGTTTACACCATTGCCTCCTCCAGCGAGAAGATTAGTGTTGTTTG 148
|||||||||||||||||||||||||||.|||||||||||.||||||||||||||.|.||||||||||.|.||||
Sbjct 75 ATCTCCTTTGGTTCATGGAATGACTCCCCAGTTTACACCTTTGCCTCCTCCAGCAAAAAGATTAGTGCTATTTG 148
Query 149 TTGCTGATGGCCTTCGAGCAGATGCACTTTACGAATTAGATGAAAATGGAAACTCTAGAGCACCGTTTATTAGG 222
|||||||||||||..||||||||.|.|||||.||||||||||||.||||||||||.||||||||.||.||||||
Sbjct 149 TTGCTGATGGCCTGAGAGCAGATACTCTTTATGAATTAGATGAAGATGGAAACTCCAGAGCACCTTTCATTAGG 222
Query 223 AATATCATAATGCATGAAGGCAGCTGGGGCATATCTCATACACGTGTGCCAACAGAATCTCGGCCAGGTCATGT 296
|||.|.|||||||||||||||||||||||..|||||||.||||||||||||||||||||||||||.||.|||||
Sbjct 223 AATGTTATAATGCATGAAGGCAGCTGGGGAGTATCTCACACACGTGTGCCAACAGAATCTCGGCCTGGCCATGT 296
Query 297 AGCTCTGATAGCTGGGTTTTATGAAGATGTCAGTGCAGTTGCCAAAGGATGGAAGGAAAATCCTGTAGAGTTTG 370
|||..||||||||||.||||||||.|||||||||||||||||||||||||||||.||||||||||||||.||||
Sbjct 297 AGCCTTGATAGCTGGATTTTATGAGGATGTCAGTGCAGTTGCCAAAGGATGGAAAGAAAATCCTGTAGAATTTG 370
Query 371 ATTCTCTTTTTAATGAAAGTAAATACACATGGAGCTGGGGAAGCCCAGATATCCTGCCTATGTTTGCCAAAGGT 444
|.|||||||||||||||||.||.|||||.|||||||||||.||.|||||||||.||||.|||||||||||||||
Sbjct 371 ACTCTCTTTTTAATGAAAGCAAGTACACGTGGAGCTGGGGGAGTCCAGATATCTTGCCCATGTTTGCCAAAGGT 444
Query 445 GCTAGTGGAGACCACGTTTATACATATAGTTATGATGCTAAAAGAGAGGATTTTGGTGCTCAAGATGCAACAAA 518
||||||||.|||||.||.||||||||||||||.||||||.|||||||.|||||||||||.||.|||||.|||||
Sbjct 445 GCTAGTGGTGACCATGTCTATACATATAGTTACGATGCTCAAAGAGAAGATTTTGGTGCCCACGATGCCACAAA 518
Query 519 ACTGGATACGTGGGTTTTTGATAATGTTAAGGACTTCTTTCATCATGCCAGAAACAACCAGTCTTTGTTTTCTA 592
||||||||||||||||||||||||.|||||||||||||||.||..|||.|||||||||||.||||||||..|.|
Sbjct 519 ACTGGATACGTGGGTTTTTGATAAAGTTAAGGACTTCTTTGATGCTGCAAGAAACAACCAATCTTTGTTCACAA 592
Query 593 AAATAAATGAAGAGAAAATAGTTTTTTTCTTACATTTATTAGGAATAGATACAAACGGACATGCTCATCGACCA 666
||.||||||||||.|||.||||||||||||||||||||||.||||||||||||||.||||||||||||||||||
Sbjct 593 AAGTAAATGAAGAAAAAGTAGTTTTTTTCTTACATTTATTGGGAATAGATACAAATGGACATGCTCATCGACCA 666
Query 667 TCCTCGAGAGACTACAAGGACAATATTAAAAAAGTTGATGATGGAGTTAAAGAAATCGTGTCTATGTTTAACCA 740
||.||.||.||.||.||||||||||||||||||||||||||||||||.||.||||||||.||.||.||.||.||
Sbjct 667 TCGTCAAGGGAATATAAGGACAATATTAAAAAAGTTGATGATGGAGTGAAGGAAATCGTATCAATTTTCAAGCA 740
Query 741 TTTCTATGGAAATGATGGGAAAACAACATTTATCTTTACCTCTGACCATGGAATGACAGACTGGGGTTCCCATG 814
|||.||||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTTTTATGGAGATGATGGGAAAACAGCATTTATCTTTACCTCTGACCATGGAATGACAGACTGGGGTTCCCATG 814
Query 815 GGGCTGGTCATCCTTCAGAGACTTTAACTCCTTTAGTCACTTGGGGAGCTGGAATCAAGTATCCCCAAAGAGTA 888
|||||||||||||.|||||||||||||||||.||.||.||||||||||||||||||||.|.|||.||||..|||
Sbjct 815 GGGCTGGTCATCCGTCAGAGACTTTAACTCCGTTCGTTACTTGGGGAGCTGGAATCAAATTTCCTCAAAATGTA 888
Query 889 TCAGCTCAGCAATTTGATGATGCATTTTTGAAAGAGTGGAGATTGGAGAATTGGAAGAGGCTAGATGTCAATCA 962
|||||||||||||.||||||||..|||||.|||||.|||||||||||.||.|||||.|||..||||||||||||
Sbjct 889 TCAGCTCAGCAATATGATGATGAGTTTTTAAAAGAATGGAGATTGGAAAACTGGAAAAGGAGAGATGTCAATCA 962
Query 963 GGCTGATATTGCACCATTGATGACTTCCCTTATTGGAGTTCCCTTTCCTCTTAACTCAGTGGGAATCCTTCCTG 1036
|||||||||||||||..|||||.|.||||||||||||||.||||||||||||||.||.||||||||.|||||||
Sbjct 963 GGCTGATATTGCACCTCTGATGGCATCCCTTATTGGAGTCCCCTTTCCTCTTAATTCGGTGGGAATACTTCCTG 1036
Query 1037 TGGATTATCTTAACAACACTGATCTCTTCAAAGCAGAGAGCATGTTTACAAATGCAGTACAGATTCTTGAACAG 1110
|||.|||||||||||||||||.|||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1037 TGGGTTATCTTAACAACACTGGTCTCTTCAAAGCAGAGAGCATGTTTACCAATGCAGTACAGATTCTTGAACAG 1110
Query 1111 TTCAAGGTGAAAATGACTCAGAAGAAAGAAGTTACTTTACCATTTTTGTTTACACCATTTAAACTGCTTTCTGA 1184
|||||||||||||||||||||||.|||||||..||||||||.||||||||||||||||||||..||||||||||
Sbjct 1111 TTCAAGGTGAAAATGACTCAGAAAAAAGAAGCCACTTTACCGTTTTTGTTTACACCATTTAAGTTGCTTTCTGA 1184
Query 1185 TTCCAAACAGTTCAACATTTTAAGAAAAGCAAGATCTTATATAAAACACAG-AAAGTTTGATGAAGTGGTCTCC 1257
|||..||||..|..|||||||||||||||||||||||||.|||||||| || |||.|||||||||||.||.|||
Sbjct 1185 TTCTCAACAACTGGACATTTTAAGAAAAGCAAGATCTTACATAAAACA-AGAAAAATTTGATGAAGTAGTGTCC 1257
Query 1258 CTTTGCAAGGAGCTAATTCATCTTGCATTGAAAGGATTGTCCTATTATCACACATATGACAGATTCTTTTTGGG 1331
||.||..|||||||.|||.|.||.||..|||.||||||||||||||||||.||.|||||||||.|.|||.||||
Sbjct 1258 CTCTGTGAGGAGCTGATTGACCTCGCCCTGAGAGGATTGTCCTATTATCATACTTATGACAGACTGTTTCTGGG 1331
Query 1332 CGTCAATGTTGTTATTGGTTTTGTGGGATGGATATCTTATGCCTCTTTGTTGATCATCAAGTCTCATTCCAACC 1405
|.|||||||||...|||||||||||||||||||.||||||.|.||||||||.|||||||||||.|||||.||
Sbjct 1332 CATCAATGTTGCAGTTGGTTTTGTGGGATGGATGTCTTATACTTCTTTGTTAATCATCAAGTCGCATTCTAA-- 1403
Query 1406 TTAT---AAAAGGTGTTAGTAAAGAAGTGAAGAAACCAAGCCATCTCCTGCCTTGTAGTTTTGTAGCTATTGGC 1476
||| ||||||...||| |||| ||||||.|||..|..||||||||.||.
Sbjct 1404 -TATCCCAAAAGGCACTAG----GAAG-GAAGAAGCCACACTGTCTCCTGCTTTA------------------- 1452
Query 1477 ATTTTAGTAGCATTTTTTCTGCTGATTCAAGCCTGTCCCTGGACATATTATGTATATGGTTTGTTGCCACTGCC 1550
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 1551 AATATGGTATGCGGTTCTAAGAGAATTTCAAGTTATTCAGGACCTTGTTGTATCAGTGTTGACCTATCCTCTGA 1624
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 1625 GCCATTTTGTTGGGTACCTGTTAGCCTTTACCCTGGGAATTGAAGTATTAGTTCTCAGTTTTTTCTACCGCTAT 1698
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 1699 ATGCTTACCGCTGGACTTACTGCCTTTGCAGCTTGGCCATTTCTCACTCGGCTGTGGACTCGAGCAAAGATGAC 1772
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 1773 CTCACTGAGTTGGACTTTCTTCTCTTTGCTCCTGGCAGTGTTCCCACTGATGCCGGTTGTAGGTCGAAAGCCAG 1846
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 1847 ACATCTCTCTAGTGATGGGTGCAGGCTTGCTGGTTCTTCTGTTATCCCTGTGTGTTGTAACATCTCTCATGAAA 1920
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 1921 AGAAAAGATAGCTTTATAAAGGAAGAGCTATTGGTACATCTGTTACAGGTGCTGAGCACAGTGCTCTCCATGTA 1994
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 1995 TGTTGTGTATAGCACTCAGAGTAGTCTACTCAGGAAGCAAGGACTGCCTCTCATGAATCAAATTATTAGCTGGG 2068
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 2069 CAACATTAGCCTCTTCCTTGGTTGTGCCACTACTGAGTTCTCCAGTTCTCTTTCAGCGATTGTTCAGCATACTT 2142
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 2143 CTTTCATTGATGTCAACCTACCTACTTCTAAGCACAGGGTATGAAGCTCTCTTTCCACTAGTGTTGTCTTGTTT 2216
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 2217 GATGTTTGTCTGGATAAACATAGAACAAGAAACTCTACAACAATCTGGTGTTTGCTGTAAACAAAAGCTCACCA 2290
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 2291 GTATCCAGTTCTCTTATAATACTGATATAACTCAGTTTCGACAGCTATATCTGGATGACATCCGTAGGGCCTTT 2364
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 2365 TTCCTTGTTTTCTTCTTAGTGACAGCATTTTTTGGAACTGGAAATATAGCTTCTATTAACAGCTTTGATCTTGC 2438
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 2439 CTCTGTCTATTGCTTTCTGACTGTGTTCAGTCCTTTTATGATGGGAGCCCTGATGATGTGGAAGATTTTAATCC 2512
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 2513 CCTTTGTTCTTGTTATGTGTGCTTTTGAAGCAGTTCAGTTGACTACTCAGTTATCGTCAAAAAGCCTTTTTCTC 2586
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 2587 ATTGTTCTCGTCATATCAGACATTATGGCTTTGCATTTTTTCTTCTTGGTCAAGGATTATGGCAGCTGGCTTGA 2660
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 2661 TATTGGGACAAGCATCAGCCACTATGTGATTGTCATGTCCATGACCATCTTTTTGGTGTTCCTCAATGGCCTGG 2734
Sbjct 1453 -------------------------------------------------------------------------- 1452
Query 2735 CCCAGCTGCTCACAACGAAGAAACTCAGACTATGTGGCAAACCCAAAAGTCACTTCATG 2793
Sbjct 1453 ----------------------------------------------------------- 1452
