Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07949
Subject:
NM_001351282.2
Aligned Length:
1548
Identities:
1433
Gaps:
114

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGACAGCGTCTTTCTTAAGACTTATCATTTGGAGCACTGGCTCAGGAGTCGAAATCACCAATGGCTCATCCAT  74

Query    1  ----------------------------------------ATGTTTAAATTTCATCAAATGAAACATATTTTTG  34
                                                    ||||||||||||||||||||||||||||||||||
Sbjct   75  CAATCAACCAGAAGTGAAGACGAAAGCTTCAAAGAAGAGAATGTTTAAATTTCATCAAATGAAACATATTTTTG  148

Query   35  AAATACTTGATAAAATGAGATGCCTGAGAAAACGTTCTACAGTGTCATTCTTGGGAGTTCTTGTCATTTTTCTC  108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AAATACTTGATAAAATGAGATGCCTGAGAAAACGTTCTACAGTGTCATTCTTGGGAGTTCTTGTCATTTTTCTC  222

Query  109  CTTTTTATGAACTTGTACATTGAAGATAGCTATGTTCTGGAAGGAGACAAACAACTTATAAGGGAAACATCCAC  182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTTTTTATGAACTTGTACATTGAAGATAGCTATGTTCTGGAAGGAGACAAACAACTTATAAGGGAAACATCCAC  296

Query  183  ACATCAACTGAATTCAGAACGCTATGTTCATACTTTCAAGGATTTATCTAATTTCTCAGGAGCCATAAATGTCA  256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ACATCAACTGAATTCAGAACGCTATGTTCATACTTTCAAGGATTTATCTAATTTCTCAGGAGCCATAAATGTCA  370

Query  257  CCTATCGCTACCTAGCTGCCACACCTTTACAAAGAAAGCGGTATCTTACAATTGGACTTTCTTCAGTAAAGCGA  330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCTATCGCTACCTAGCTGCCACACCTTTACAAAGAAAGCGGTATCTTACAATTGGACTTTCTTCAGTAAAGCGA  444

Query  331  AAAAAAGGAAACTATTTACTTGAGACAATTAAGTCAATTTTTGAGCAATCCAGCTATGAAGAGCTGAAGGAAAT  404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAAAAAGGAAACTATTTACTTGAGACAATTAAGTCAATTTTTGAGCAATCCAGCTATGAAGAGCTGAAGGAAAT  518

Query  405  TTCAGTGGTGGTTCACCTAGCAGACTTTAATTCTTCCTGGCGTGATGCCATGGTCCAGGATATTACACAGAAAT  478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TTCAGTGGTGGTTCACCTAGCAGACTTTAATTCTTCCTGGCGTGATGCCATGGTCCAGGATATTACACAGAAAT  592

Query  479  TTGCGCACCATATTATTGCAGGAAGATTAATGGTTATACATGCTCCAGAGGAGTATTACCCAATCCTAGATGGC  552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTGCGCACCATATTATTGCAGGAAGATTAATGGTTATACATGCTCCAGAGGAGTATTACCCAATCCTAGATGGC  666

Query  553  CTTAAAAGAAATTACAATGATCCAGAAGATAGAGTCAAATTTCGTTCCAAGCAAAATGTAGATTATGCTTTTCT  626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTTAAAAGAAATTACAATGATCCAGAAGATAGAGTCAAATTTCGTTCCAAGCAAAATGTAGATTATGCTTTTCT  740

Query  627  GCTTAATTTTTGTGCCAATACTTCAGACTATTATGTAATGCTTGAAGATGATGTTCGATGTTCAAAAAATTTCT  700
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GCTTAATTTTTGTGCCAATACTTCAGACTATTATGTAATGCTTGAAGATGATGTTCGATGTTCAAAAAATTTCT  814

Query  701  TAACTGCCATCAAGAAAGTCATTGCATCCCTAGAAGGAACTTACTGGGTAACTCTTGAATTCTCTAAGCTTGGC  774
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TAACTGCCATCAAGAAAGTCATTGCATCCCTAGAAGGAACTTACTGGGTAACTCTTGAATTCTCTAAGCTTGGC  888

Query  775  TACATTGGTAAACTCTATCATTCTCATGATCTCCCACGTTTGGCCCATTTTTTATTAATGTTTTATCAAGAAAT  848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TACATTGGTAAACTCTATCATTCTCATGATCTCCCACGTTTGGCCCATTTTTTATTAATGTTTTATCAAGAAAT  962

Query  849  GCCTTGTGATTGGCTATTGACTCATTTCCGTGGTCTGTTGGCTCAGAAAAATGTGATCCGTTTTAAACCATCTC  922
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCCTTGTGATTGGCTATTGACTCATTTCCGTGGTCTGTTGGCTCAGAAAAATGTGATCCGTTTTAAACCATCTC  1036

Query  923  TCTTTCAGCACATGGGCTATTATTCATCATACAAAGGGACGGAGAATAAGCTGAAGGATGATGATTTTGAAGAG  996
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TCTTTCAGCACATGGGCTATTATTCATCATACAAAGGGACGGAGAATAAGCTGAAGGATGATGATTTTGAAGAG  1110

Query  997  GAGTCATTTGACATTCCTGATAACCCCCCTGCAAGTCTGTACACCAACATGAATGTGTTTGAAAATTATGAAGC  1070
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GAGTCATTTGACATTCCTGATAACCCCCCTGCAAGTCTGTACACCAACATGAATGTGTTTGAAAATTATGAAGC  1184

Query 1071  AAGCAAGGCTTACAGTAGTGTTGATGAGTACTTTTGGGGGAAACCACCTTCAACAGGAGATGTTTTTGTGATTG  1144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AAGCAAGGCTTACAGTAGTGTTGATGAGTACTTTTGGGGGAAACCACCTTCAACAGGAGATGTTTTTGTGATTG  1258

Query 1145  TATTTGAAAATCCAATTATAATAAAAAAAATTAAAGTAAATACTGGAACAGAAGATCGGCAAAATGATATTTTG  1218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TATTTGAAAATCCAATTATAATAAAAAAAATTAAAGTAAATACTGGAACAGAAGATCGGCAAAATGATATTTTG  1332

Query 1219  CATCATGGAGCCCTAGATGTTGGGGAAAACGTTATGCCTAGCAAACAAAGGAGACAATGTTCTAGTTACTTAAG  1292
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 1333  CATCATGGAGCCCTAGATGTTGGGGAAAACGTTATGCCTAGCAAACAAAGGAGACAATGTTCTACTTACTTAAG  1406

Query 1293  ACTAGGAGAATTCAAAAATGGAAACTTTGAAATGTCAGGTGTAAATCAAAAAATTCCATTTGATATACATTGTA  1366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  ACTAGGAGAATTCAAAAATGGAAACTTTGAAATGTCAGGTGTAAATCAAAAAATTCCATTTGATATACATTGTA  1480

Query 1367  TGAGGATATATGTCACCAAAACACAAAAGGAATGGCTAATTATTAGGAGTATTAGCATTTGGACTTCT  1434
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TGAGGATATATGTCACCAAAACACAAAAGGAATGGCTAATTATTAGGAGTATTAGCATTTGGACTTCT  1548

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