Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_07971
• Subject: NM_001077399.3
• Aligned Length: 1184
• Identities: 368
• Gaps: 787

Alignment

Query    1  ATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGAGCCGGGGGGCGAGAAATGCCCGCGTCCTCCGGGGGATTCT  74
            |||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGGGCCGGGGGGCGAGAAATGCCCGCGTCCTCCGGGGGATTCT  74

Query   75  CGCAGGAGCCACAGCTAACAAGGTTTCTCATAACAGGACCCGGGCCCTGCAAAGCCACAGCTCCTCAGAGGGCA  148
            |||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct   75  CGCAGGAGCCACAGCTAACAAGGCTTCTCATAACAGGACCCGGGCCCTGCAAAGCCACAGCTCCCCAGAGGGCA  148

Query  149  AGGAGGAACCTGAACCCCTATCCCCGGAGCTGGAATACATTCCCAGAAAGAGGGGCAAGAACCCCATGAAAGCT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGGAGGAACCTGAACCCCTATCCCCGGAGCTGGAATACATTCCCAGAAAGAGGGGCAAGAACCCCATGAAAGCT  222

Query  223  GTGGGACTGGCCTGGTACAGCCTGTACACCCGCACCTGGCTCGGGTACCTCTTCTACCGACAGCAGCTGCGCAG  296
            |||||||||||||||    |||                                                    
Sbjct  223  GTGGGACTGGCCTGG----GCC----------------------------------------------------  240

Query  297  GGCTCGGAATCGCTACCCTAAAGGCCACTCGAAAACCCAGCCCCGCCTCTTCAATGGAGTGAAGGTGCTTCCC-  369
                    ||||                                                      ||||||| 
Sbjct  241  --------ATCG------------------------------------------------------GCTTCCCT  252

Query  370  ------ATCCCTGTCCTCTCGGACAACTACAGCTACCTCATCATCGACACCCAGGCCCAGCTGGCTGTGGCTGT  437
                  ||||   ||||||                     |||||..||||.||                    
Sbjct  253  TGTGGTATCC---TCCTCT---------------------TCATCCTCACCAAG--------------------  282

Query  438  GGACCCTTCAGACCCTCGGGCTGTGCAGGCTTCCATTGAAAAGGAAGGGGTCACCTTGGTCGCCATTCTGTGTA  511
                            ||||..|||            ||.|||||                      |.|||| 
Sbjct  283  ----------------CGGGAAGTG------------GACAAGGA----------------------CCGTGT-  305

Query  512  CTCACAAGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCGGCGGCAC---CGGGACTGTC--------  574
                .|||||    ||      ||.|||          ||    ||||.|.||   |||  .||||        
Sbjct  306  ----GAAGCA----GA------TGAAGG----------CT----CGGCAGAACATGCGG--TTGTCCAACACGG  349

Query  575  GGGTGTACGGGAGCC-----CTCAGGACGGCATCCCCTACC----TCACCCATCCCCTGTGTCATCAAGATGTG  639
            |.|.|||.|.|||||     .||||   |||.|  |||.||    |..|||.||||||          ||||| 
Sbjct  350  GCGAGTATGAGAGCCAGAGGTTCAG---GGCTT--CCTCCCAGAGTGCCCCGTCCCCT----------GATGT-  407

Query  640  GTCAGCGTGGGAC--GGCTTCAGATCCGGGCCCTGGCTACACCTGGCCACACACAAGGCCATCTGGTCTACCTA  711
                   ||||.|  ||.|.||||.|                                                
Sbjct  408  -------TGGGTCTGGGGTGCAGACC------------------------------------------------  426

Query  712  CTGGATGGGGAGCCCTACAAGGGTCCCTCCTGCCTCTTCTCAGGGGACCTGCTCTTCCTCTCTGGCTGTGGGCG  785
                                                                                      
Sbjct  427  --------------------------------------------------------------------------  426

Query  786  GACCTTTGAGGGCAATGCAGAGACCATGCTGAGCTCACTGGACACTGTGCTGGGGCTAGGGGATGACACCCTTC  859
                                                                                      
Sbjct  427  --------------------------------------------------------------------------  426

Query  860  TGTGGCCTGGTCATGAGTATGCAGAGGAGAACCTGGGCTTTGCAGGTGTGGTGGAGCCCGAGAACCTGGCCCGG  933
                                                                                      
Sbjct  427  --------------------------------------------------------------------------  426

Query  934  GAGAGGAAGATGCAGTGGGTGCAGCGGCAGCGGCTGGAGCGCAAGGGCACGTGCCCATCTACCCTGGGAGAGGA  1007
                                                                                      
Sbjct  427  --------------------------------------------------------------------------  426

Query 1008  GCGCTCCTACAACCCGTTCCTGAGAACCCACTGCCTGGCGCTACAGGAGGCTCTGGGGCCGGGGCCGGGCCCCA  1081
                                                                                      
Sbjct  427  --------------------------------------------------------------------------  426

Query 1082  CTGGGGATGATGACTACTCCCGGGCCCAGCTCCTGGAAGAGCTCCGCCGGCTGAAGGATATGCACAAGAGCAAG  1155
                                                                                      
Sbjct  427  --------------------------------------------------------------------------  426