Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_08009
• Subject: XM_006511459.2
• Aligned Length: 1210
• Identities: 805
• Gaps: 314

Alignment

Query    1  ATGGAGCCGGTAGGCTGCTGCGGCGAGTGCCGCGGCTCCTCCGTAGACCCGCGGAGCACCTTCGTGTTGAGTAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCTGGCGGAGGTGGTGGAGCGTGTGCTCACCTTCCTGCCCGCCAAGGCGTTGCTGCGGGTGGCCTGCGTGTGCC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCTTATGGAGGGAGTGTGTGCGCAGAGTATTGCGGACCCATCGGAGCGTAACCTGGATCTCCGCAGGCCTGGCG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GAGGCCGGCCACCTGGAGGGGCATTGCTTGGTTCGCGTGGTAGCAGAGGAGCTTGAGAATGTTCGCATCTTACC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  ACATACAGTTCTTTACATGGCTGATTCAGAAACTTTCATTAGTCTGGAAGAGTGTCGTGGCCATAAGAGAGCAA  370
                            |||||.|||||.|||||||||||.||.|||||||||||||||||||||||.|||||.|
Sbjct    1  ----------------ATGGCAGATTCTGAAACTTTCATCAGCCTGGAAGAGTGTCGTGGCCATAAAAGAGCGA  58

Query  371  GGAAAAGAACTAGTATGGAAACAGCACTTGCCCTTGAGAAGCTATTCCCCAAACAATGCCAAGTCCTTGGGATT  444
            ||||.|||||||.||||||.||||||..||||||.||||||||.||||||||.||.||||||||||||||||||
Sbjct   59  GGAAGAGAACTACTATGGAGACAGCATGTGCCCTGGAGAAGCTTTTCCCCAAGCAGTGCCAAGTCCTTGGGATT  132

Query  445  GTGACCCCAGGAATTGTAGTGACTCCAATGGGATCAGGTAGCAATCGACCTCAGGAAATAGAAATTGGAGAATC  518
            ||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  133  GTGACCCCGGGAATTGTGGTGACTCCAATGGGATCAGGTAGCAATCGACCTCAGGAAATAGAAATTGGAGAATC  206

Query  519  TGGTTTTGCTTTATTATTCCCTCAAATTGAAGGAATAAAAATACAACCCTTTCATTTTATTAAGGA-TCCAAAG  591
            ||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||| ||| |||
Sbjct  207  TGGTTTTGCTTTATTATTCCCTCAAATTGAAGGAATAAAAATTCAACCCTTTCATTTTATTAAGGACTCC-AAG  279

Query  592  AATTTAACATTAGAAAGACATCAACTCACTGAAGTAGGTCTTTTAGATAACCCTGAACTTCGTGTGGTCCTTGT  665
            |||||||||.|.||||||||.||.||.|||||||||||||||.|.||.||||||||||||||||||||||||||
Sbjct  280  AATTTAACACTCGAAAGACACCAGCTTACTGAAGTAGGTCTTCTGGACAACCCTGAACTTCGTGTGGTCCTTGT  353

Query  666  CTTTGGTTATAATTGCTGTAAGGTGGGAGCCAGTAATTATCTGCAGCAAGTAGTCAGCACTTTCAGTGATATGA  739
            ||||||.|||||.||||||||||||||||||||||||||.|||||.|..|||||||||||||||||.|||||||
Sbjct  354  CTTTGGCTATAACTGCTGTAAGGTGGGAGCCAGTAATTACCTGCATCGGGTAGTCAGCACTTTCAGCGATATGA  427

Query  740  ATATCATCTTGGCTGGAGGCCAGGTGGACAACCTGTCATCACTGACTTCTGAAAAGAACCCTCTGGATATTGAT  813
            |||||||||||||||||||||||||||||||..||||.|||||.||||.|||.|||||||||||||||||||||
Sbjct  428  ATATCATCTTGGCTGGAGGCCAGGTGGACAATTTGTCTTCACTTACTTGTGAGAAGAACCCTCTGGATATTGAT  501

Query  814  GCCTCGGGTGTGGTTGGACTGTCATTTAGTGGACACCGAATCCAGAGTGCCACTGTGCTCCTCAACGAGGACGT  887
            |||.|.||||||||||||||||||||||||||.||||||||||||||||||||.||.|||||||..|||||.||
Sbjct  502  GCCACAGGTGTGGTTGGACTGTCATTTAGTGGGCACCGAATCCAGAGTGCCACAGTTCTCCTCACTGAGGATGT  575

Query  888  CAGTGATGAGAAGACTGCTGAGGCTGCGATGCAGCGCCTCAAAGCGGCCAACATTCCAGAGCATAACACCATTG  961
            .|.|||||..|||||.|..||||||||.|||||||||||||||||.||||||||.||.||.||.||||||||||
Sbjct  576  AAATGATGCCAAGACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGCCAACATCCCTGAACAGAACACCATTG  649

Query  962  GCTTCATGTTTGCATGCGTTGGCAGGGGCTTTCAGTATTACAGAGCCAAGGGGAATGTTGAGGCTGATGCATTT  1035
            |||||||||||||||||||||||.|.|||||||||||.|||||||||||||||||||||||.||||||||||||
Sbjct  650  GCTTCATGTTTGCATGCGTTGGCCGAGGCTTTCAGTACTACAGAGCCAAGGGGAATGTTGAAGCTGATGCATTT  723

Query 1036  AGAAAGTTTTTTCCTAGTGTTCCCTTATTCGGCTTCTTTGGAAATGGAGAAATTGGATGTGATCGGATAGTCAC  1109
            ||||||||.|||||.|||||.||||||||.|||||||||||||||||.||.|||||.||.||.|||||||||||
Sbjct  724  AGAAAGTTCTTTCCCAGTGTCCCCTTATTTGGCTTCTTTGGAAATGGGGAGATTGGCTGCGACCGGATAGTCAC  797

Query 1110  TGGGAACTTTATATTGAGGAAATGTAATGAGGTAAAAGATGATGATCTGTTTCATAGCTATACAACAATAATGG  1183
            |||||||||||||.||||||.|||||||||||||||.||.||.||.|||||.||||||||.|||||.||.||||
Sbjct  798  TGGGAACTTTATACTGAGGAGATGTAATGAGGTAAAGGAAGAGGACCTGTTCCATAGCTACACAACCATCATGG  871

Query 1184  CACTCATACATCTGGGGTCATTTAAA  1209
            |.|||.|.||.|||||..|.|.||||
Sbjct  872  CTCTCGTTCACCTGGGAACCTCTAAA  897