Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08019
- Subject:
- XM_011523544.2
- Aligned Length:
- 1507
- Identities:
- 724
- Gaps:
- 761
Alignment
Query 1 ATGAAGTGTGAGCACTGCACGCGCAAGGAATGTAGTAAGAAAACAAAAACTGATGACCAAGAGAATGTGTCAGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAGTGTGAGCACTGCACGCGCAAGGAATGTAGTAAGAAAACAAAAACTGATGACCAAGAGAATGTGTCAGC 74
Query 75 CGATGCACCGAGTCCAGCCCAGGAAAATGGAGAGAAGGGAGAATTCCACAAGTTGGCTGATGCCAAGATATTTT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGATGCACCGAGTCCAGCCCAGGAAAATGGAGAGAAGGGAGAATTCCACAAGTTGGCTGATGCCAAGATATTTT 148
Query 149 TGAGCGACTGCCTGGCATGTGACAGCTGTATGACTGCAGAGGAAGGAGTCCAACTTTCCCAGCAAAATGCCAAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGAGCGACTGCCTGGCATGTGACAGCTGTATGACTGCAGAGGAAGGAGTCCAACTTTCCCAGCAAAATGCCAAG 222
Query 223 GACTTCTTCCGCGTTCTGAACCTTAACAAGAAATGTGATACCTCAAAGCACAAAGTGCTGGTAGTGTCTGTGTG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GACTTCTTCCGCGTTCTGAACCTTAACAAGAAATGTGATACCTCAAAGCACAAAGTGCTGGTAGTGTCTGTGTG 296
Query 297 TCCTCAATCTTTGCCTTATTTTGCTGCTAAATTCAACCTCAGTGTAACTGATGCATCCAGAAGACTCTGTGGTT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCCTCAATCTTTGCCTTATTTTGCTGCTAAATTCAACCTCAGTGTAACTGATGCATCCAGAAGACTCTGTGGTT 370
Query 371 TCCTCAAAAGTCTTGGGGTGCACTATGTATTTGATACGACGATAGCTGCGGATTTTAGTATCCTGGAGAGTCAA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCCTCAAAAGTCTTGGGGTGCACTATGTATTTGATACGACGATAGCTGCGGATTTTAGTATCCTGGAGAGTCAA 444
Query 445 AAAGAATTCGTGCGTCGCTATCGCCAGCACAGTGAGGAGGAACGCACCCTGCCCATGCTGACCTCTGCCTGTCC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAAGAATTCGTGCGTCGCTATCGCCAGCACAGTGAGGAGGAACGCACCCTGCCCATGCTGACCTCTGCCTGTCC 518
Query 519 TGGCTGGGTCCGATACGCCGAGCGGGTGCTGGGTCGCCCCATCACTGCCCACCTCTGCACCGCCAAGTCCCCCC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGCTGGGTCCGATACGCCGAGCGGGTGCTGGGTCGCCCCATCACTGCCCACCTCTGCACCGCCAAGTCCCCCC 592
Query 593 AGCAGGTCATGGGCTCTTTGGTGAAGGATTATTTCGCCAGACAGCAGAACCTGTCTCCAGAGAAGATTTTCCAC 666
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 593 AGCAGGTCATGGGCTCTTTGGTGAAGGATTATTTCGCCAGACAGCAG-----GTC-------------TTCCAC 648
Query 667 GTCATTGTGGCCCCTTGTTATGACAAGAAGCTGGAGGCTCTTCAGGAAAGCCT-TCCCCCTGCTTTGCATGGCT 739
|| |||| .||| ||||| ||.||||..
Sbjct 649 GT---------------------------GCTG----------------CCCTCTCCCC------TGGATGGAG 673
Query 740 CCCGGGGCGCTGACTGCGTGTTAACATCAGAAATTAGCCAGGCGTGGTGGTGCACACCTGTGATCACAGCTACT 813
|||.|.| ||..|||| || .|.||..||||| || |||
Sbjct 674 CCCAGAG------CTATGTGT----------------CC--TCCTGTAGGTGC-CA----TGA----------- 707
Query 814 CGGGAGGCTGCGGCAAGAGAATCACTTGAACCCGGGAGGCAGAGGTTACAGCGAGACAAGATTGCACCACTGGA 887
|.|||.||.|| |||| ||||||....||| |||| .|..||||
Sbjct 708 ---GGGGCAGCCGC-AGAG----------ACCCGGCCTCCAG------CAGC--------CTCTCACC------ 747
Query 888 CTCCAGCCTGGGCGGCGGAGGTGAAATTGCTCAAATAATGGAGCAAGGTGACCTCTCAGTGAGAGATGCTGCCG 961
Sbjct 748 -------------------------------------------------------------------------- 747
Query 962 TCGACACTCTGTTTGGAGACTTGAAGGAGGACAAAGTGACGCGTCATGATGGAGCCAGCTCAGACGGGCACCTG 1035
Sbjct 748 -------------------------------------------------------------------------- 747
Query 1036 GCACACATCTTCAGACATGCGGCCAAGGAGCTGTTCAACGAGGATGTGGAGGAGGTCACTTACCGAGCCCTGAG 1109
Sbjct 748 -------------------------------------------------------------------------- 747
Query 1110 AAACAAAGACTTCCAAGAGGTCACCCTTGAGAAGAACGGAGAGGTGGTGTTACGCTTTGCTGCAGCCTATGGCT 1183
Sbjct 748 -------------------------------------------------------------------------- 747
Query 1184 TTCGAAACATCCAGAACATGATCCTGAAGCTTAAGAAGGGCAAGTTCCCATTCCACTTTGTGGAGGTCCTCGCC 1257
Sbjct 748 -------------------------------------------------------------------------- 747
Query 1258 TGTGCTGGAGGATGCTTAAATGGCAGAGGCCAAGCCCAGACTCCAGACGGACATGCGGATAAGGCCCTGCTGCG 1331
Sbjct 748 -------------------------------------------------------------------------- 747
Query 1332 GCAGATGGAAGGCATTTACGCTGACATCCCTGTGCGGCGTCCGGAGTCCAGTGCACACGTGCAGGAGCTGTACC 1405
Sbjct 748 -------------------------------------------------------------------------- 747
Query 1406 AGGAGTGGCTGGAGGGGATCAACTCCCCCAAGGCCCAAGAGGTGCTGCATACCACGTACCAGAGCCAGGAGCGT 1479
Sbjct 748 -------------------------------------------------------------------------- 747
Query 1480 GGCACACACAGCCTGGACATCAAGTGG 1506
Sbjct 748 --------------------------- 747