Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_08124
• Subject: NM_175099.3
• Aligned Length: 1705
• Identities: 1385
• Gaps: 74

Alignment

Query    1  ATGCTGGAACGTCGTTGCAGGGGCCCCCTGGCCATGGGCCTGGCCCAGCCCCGACTCCTTTCTGGGCCCTCCCA  74
            ||||||||||..||.||||||||||||..|||||||||||..||.||||||.|.|||.||||||||||||||||
Sbjct    1  ATGCTGGAACAGCGCTGCAGGGGCCCCACGGCCATGGGCCCAGCTCAGCCCTGGCTCTTTTCTGGGCCCTCCCA  74

Query   75  GGAGTCACCCCAGACCCTGGGGAAGGAGTCCCGCGGGCTGAGGCAACAAGGCACGTCAGTGGCCCAGTCTGGTG  148
            ||||||..|||||.||     ||       |.|.|||.|||||.|.||.||||..|||   ||.|||.|..|.|
Sbjct   75  GGAGTCCTCCCAGCCC-----GA-------CAGAGGGTTGAGGTACCAGGGCAAATCA---GCTCAGCCAAGAG  133

Query  149  CCCAAGCCCCAGGCAGGGCCCATCGCTGTGCCCACTGTCGAAGGCACTTCCCTGGCTGGGTGGCTCTGTGGCTT  222
            .||||.|||||||||.||.||||||.||||||||||||||.|.||.||||||.|||||||||||.|||||||||
Sbjct  134  GCCAAACCCCAGGCAAGGTCCATCGTTGTGCCCACTGTCGGAAGCGCTTCCCGGGCTGGGTGGCCCTGTGGCTT  207

Query  223  CACACCCGCCGGTGCCAGGCCCGGCTGCCCTTGCCCTGCTCTGAGTGTGGCCGTCGCTTTCGCCATGCCCCCTT  296
            ||..|.||.||||||||||||||||||||..||||||||..|||.||...||..|||||||||||.||||||||
Sbjct  208  CATGCTCGGCGGTGCCAGGCCCGGCTGCCTCTGCCCTGCCATGAATGCAACCAGCGCTTTCGCCACGCCCCCTT  281

Query  297  CTTAGCACTGCACCGCCAGGTCCATGCTGCTGCCACCCCAGACCTGGGCTTTGCCTGCCACCTCTGTGGGCAGA  370
            ||||||.|||||.|..|||||.||||||.||||...|||.||||||||.||...|||||||||.||||||||.|
Sbjct  282  CTTAGCGCTGCATCTTCAGGTTCATGCTTCTGCAGTCCCCGACCTGGGTTTCATCTGCCACCTATGTGGGCATA  355

Query  371  GCTTCCGAGGCTGGGTGGCCCTGGTTCTGCATCTGCGGGCCCATTCAGCTGCAAAGCGGCCCATCGCTTGTCCC  444
            ||||||||||.|||||.|||||||||||||||||||||||.||.||||||.||||||||||||||.||||.||.
Sbjct  356  GCTTCCGAGGATGGGTAGCCCTGGTTCTGCATCTGCGGGCTCACTCAGCTTCAAAGCGGCCCATCACTTGCCCT  429

Query  445  AAATGCGAGAGACGCTTCTGGCGACGAAAGCAGCTTCGAGCTCATCTGCGGCGGTGCCACCCTCCCGCCCCGGA  518
            .|||||||.||||||||||||||||.|||.||||||||||||||||||||..|||||||.||.||.|.|||.||
Sbjct  430  GAATGCGACAGACGCTTCTGGCGACAAAAACAGCTTCGAGCTCATCTGCGAAGGTGCCAGCCCCCTGTCCCTGA  503

Query  519  GGCCCGGCCCTTCATATGCGGCAACTGTGGCCGGAGCTTTGCCCAGTGGGACCAGCTAGTTGCCCACAAGCGGG  592
            |||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.||||..||||||||||
Sbjct  504  GGCCCGGCCCTTCATATGCGGCAACTGTGGCCGGAGCTTTGCCCAATGGGACCAACTGGTTGTTCACAAGCGGG  577

Query  593  TGCACGTAGCTGAGGCCCTGGAGGAGGCCGCAGCCAAGGCTCTGGGGCCCCGGCCCA-GGGGCCGCCCCGCGGT  665
            |||||||.|||||||||.||||||||||.||||||||.||.|||||.||.| ||||| |.||.||.||||    
Sbjct  578  TGCACGTGGCTGAGGCCTTGGAGGAGGCAGCAGCCAAAGCCCTGGGTCCTC-GCCCACGAGGACGTCCCG----  646

Query  666  GACCGCCCCCCGGCCCGGTGGAGATGCCGTCGACCGCCCCTTCCAGTGTGCCTGTTGTGGCAAGCGCTTCCGGC  739
              |.||.|||.||||.||||||||.||.||.|||||||||||||||||||||||.||.||||||||.|||||.|
Sbjct  647  --CAGCTCCCAGGCCTGGTGGAGACGCTGTGGACCGCCCCTTCCAGTGTGCCTGCTGCGGCAAGCGTTTCCGCC  718

Query  740  ACAAGCCCAACTTGATCGCTCACCGCCGCGTGCACACGGGCGAGCGGCCCCACCAGTGCCCCGAGTGCGGGAAG  813
            ||||||||||..|||||||.|||||||||||||||||.||.|||||.||.|||||||||||.||||||||||||
Sbjct  719  ACAAGCCCAATCTGATCGCCCACCGCCGCGTGCACACTGGTGAGCGACCACACCAGTGCCCAGAGTGCGGGAAG  792

Query  814  CGCTTTACCAATAAGCCCTATCTGACTTCGCACCGGCGCATCCACACCGGCGAGAAGCCCTACCCGTGCAAAGA  887
            ||.||.|||||.||||||||.|||||.||||||||||||||.||.||||||||||||||||||||.||||..||
Sbjct  793  CGTTTCACCAACAAGCCCTACCTGACCTCGCACCGGCGCATACATACCGGCGAGAAGCCCTACCCATGCACCGA  866

Query  888  GTGCGGCCGCCGCTTCCGGCACAAACCCAACCTGCTGTCTCACAGCAAGATTCACAAGCGATCCGAGGGGTCGG  961
            |||.||||||||||||||.|||||||||||||||.||||.||||||||.||.||||||||.|..||||..||.|
Sbjct  867  GTGTGGCCGCCGCTTCCGCCACAAACCCAACCTGTTGTCGCACAGCAAAATCCACAAGCGCTTGGAGGTCTCAG  940

Query  962  CCCAGGCCGCCCCCGGCCCGGGGAGCCCCCAGCTGCCAGCCGGCCCCCAGGAGTCCGCGGCCGAGCCCACCCCG  1035
            |.|||||.|||||...|||.|.|||.|.||||.|                     .||.||.|||||.|     
Sbjct  941  CGCAGGCTGCCCCACACCCCGAGAGTCACCAGAT---------------------TGCAGCAGAGCCTA-----  988

Query 1036  GCGGTACCTCTGAAACCGGCCCAGGAGCCGCCGCCAGGGG-CCCCGCCAGAGCACCCGCAGGACCCGATCGAAG  1108
             .||.||      ||||.||.|..|.|..||| ||.|||| ||||||             ||||||.|.|..||
Sbjct  989  -TGGCAC------AACCTGCACTTGGGGTGCC-CCTGGGGTCCCCGC-------------GGACCCCAGCTGAG  1041

Query 1109  CCCCC--CCCTCCCTCTACAGCTGCGACGACTGCGGCAGGAGCTTCCGGCTGGAGCGCTTCCTGCGGGCCCACC  1180
            .|.||  |.|| |||..|.||||||..||||||||||.|.|||||||||||||||||||||||||||...||||
Sbjct 1042  GCACCTGCGCT-CCTGCATAGCTGCTCCGACTGCGGCCGCAGCTTCCGGCTGGAGCGCTTCCTGCGGCTACACC  1114

Query 1181  AGCGGCAGCACACCGGGGAGCGGCCCTTCACCTGCGCCGAGTGCGGGAAGAACTTCGGCAAGAAGACGCACCTG  1254
            ||.||||||||||.||||||.||||||||.|||||.|.|||||.||.|||||||||||||||||||||||||||
Sbjct 1115  AGAGGCAGCACACAGGGGAGAGGCCCTTCGCCTGCACAGAGTGTGGCAAGAACTTCGGCAAGAAGACGCACCTG  1188

Query 1255  GTGGCGCACTCGCGCGTGCACTCCGGCGAGCGGCCCTTCGCCTGCGAGGAGTGCGGCCGCCGCTTCTCCCAGGG  1328
            |||||||||||.|||||||||||||||||.||.||||||||||||||||||||.||.|||||.|||||.|||||
Sbjct 1189  GTGGCGCACTCACGCGTGCACTCCGGCGAACGTCCCTTCGCCTGCGAGGAGTGTGGTCGCCGTTTCTCACAGGG  1262

Query 1329  CAGCCATCTGGCGGCGCATCGGCGCGACCACGCCCCCGATCGGCCCTTCGTGTGTCCCGACTGCGGCAAGGCCT  1402
            ||||||.|||||.||.||.|||||.|||||.||.||.||..|||||||||||||.||.||||||||||||||.|
Sbjct 1263  CAGCCACCTGGCAGCCCACCGGCGAGACCATGCACCAGAGAGGCCCTTCGTGTGCCCGGACTGCGGCAAGGCTT  1336

Query 1403  TCCGCCACAAACCCTACCTGGCGGCGCACCGGCGCATCCACACCGGCGAGAAGCCCTACGTCTGCCCCGACTGC  1476
            ||||||||||.|||||||||||.||||||||.|||||||||||.||||||||.|||||.||.||.||||||||.
Sbjct 1337  TCCGCCACAAGCCCTACCTGGCTGCGCACCGACGCATCCACACAGGCGAGAAACCCTATGTGTGTCCCGACTGT  1410

Query 1477  GGCAAAGCCTTCAGCCAGAAGTCCAACCTGGTGTCGCACCGGCGCATCCACACGGGCGAGCGGCCCTACGCCTG  1550
            ||||||||.|||||.||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||
Sbjct 1411  GGCAAAGCTTTCAGTCAGAAGTCCAACCTGGTGTCCCACCGGCGCATCCACACAGGCGAGCGGCCCTACGCCTG  1484

Query 1551  TCCCGACTGCGACCGCAGCTTCAGCCAGAAGTCCAACCTCATCACCCACCGCAAGAGCCACATCCGGGACGGCG  1624
            .||||||||.||.||.||||||||.|||||||||||.||.|||||.|||||.|||||||||||||||||.||||
Sbjct 1485  CCCCGACTGTGATCGTAGCTTCAGTCAGAAGTCCAATCTTATCACACACCGGAAGAGCCACATCCGGGATGGCG  1558

Query 1625  CCTTCTGCTGTGCCATCTGTGGCCAGACCTTCGACGACGAGGAGAGACTCCTGGCCCACCAGAAGAAGCACGAT  1698
            |||||||.|||||||||||||||||||||||.||.||||||||..|||||.||...||||||||||||||.|||
Sbjct 1559  CCTTCTGTTGTGCCATCTGTGGCCAGACCTTTGATGACGAGGACCGACTCTTGATGCACCAGAAGAAGCATGAT  1632

Query 1699  GTC  1701
            |.|
Sbjct 1633  GCC  1635