Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08191
- Subject:
- NR_147851.1
- Aligned Length:
- 3529
- Identities:
- 944
- Gaps:
- 2581
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGCCGCAGCGCGCATTTGGGCTCCGAGGAAGTTGACCGAGGCGGCTGCCGCAGGATCCCGGGCCCGGATCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACGAAGCCCGCGCGGCCGTCTCCTCCGCGCGCCACCCCTGCGCCTCCCGCGAGCTCCACTTCCCATCTGCTATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTTTCCGATTGTTTTCCGGTGGCGAGCCCGGCTCCGAAACTTACAAAGTGTTGGATGTCCCCCGTTCGAACTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACTGCAGACCGCCTCTGGGTAGCTGGATGAAGCCCACCCCGTCCCCTTCTGGTACCAAAGTGCTTACTCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCCAAAGTGCCGTGTCTGAACTGCCGCTGGGAAGAAGCGGCTCCTGAGACGCGCCCACACCTTTCACCTGCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCGCTTCCCCCTCCTCGGCCACCTTCCCGGCGGAAGCAGCGAGGAGGGAGCCCCCTTTGGCCGTCCTCCGTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACCGGTTTTCCGAGGCTGGCAAAAGCCGAGGCTGGATTTGGGGGAGGAATATTAGACTCGGAGGAGTCTGCGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTTTTCTCCTCCCCGCGCCTCCCGGTCGCCGCGGGTTCACCGCTCAGTCCCCGCGCTCGCTCCGCACCCCACC 592
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 593 CACTTCCTGTGCTCGCCCGGGGGGCGTGTGCCGTGCGGCTGCCGGAGTTCGGGGAAGTTGTGGCTGTCGAGAAT 666
Query 3 GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC 740
Query 77 CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG 814
Query 151 GAGAGCGCCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCT 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAGAGCGCCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCT 888
Query 225 CTATGCTGGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCA 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTATGCTGGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCA 962
Query 299 TCGAGATCCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAG 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCGAGATCCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAG 1036
Query 373 ACCTCTAGGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACCTCTAGGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA 1110
Query 447 AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC 1184
Query 521 CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCCGGGAGCAGTCAGGGGAC 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1185 CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCAGGGAGCAGTCAGGGGAC 1258
Query 595 TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC 1332
Query 669 ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG 1406
Query 743 TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAA----------------------------------- 781
|||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAAGAGCTGAAATCTCATTCACAGTTTGGTTATGATGG 1480
Query 782 -------------------------------------------------------------------------- 781
Sbjct 1481 GAAAGCTTCCTCCCCATGGTGGACGAATGGTGTCAAAACGGCCAGTGGGATCAATCAGCCTGACTTGCTCGCAG 1554
Query 782 ---------GACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACCTTTCCTCTCAAAACTCATCTTC 846
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AATCCTCCCGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACCTTTCCTCTCAAAACTCATCTTC 1628
Query 847 TTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACAAGCTGGGCCACACCAATGCCAG 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACAAGCTGGGCCACACCAATGCCAG 1702
Query 921 CATCATGCTATTTG------GTGAGACT--GTGCTC-------------------------------------- 948
|||||||||||||| .||||.|| |.||||
Sbjct 1703 CATCATGCTATTTGAACTAAATGAGCCTACGAGCTCAACTTTGTTGCAAGGTCCAGGCGCCGTCAGCGAGGTGA 1776
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1777 GCAACGGCACGTCGAGGAGGGCAGGCTGCGTCTGGCTGCTGCCTCTTCTGGTCTTGCACCTGCTTCTCAAATTT 1850
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1851 TGATGTGAGTGCCACTTCCCCACCCGGGAAAGGCTGCCGCCACCACCACCACCAACACAACAGCAATGGCAACA 1924
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1925 CCGACAGCAACCAATCAGATATATACAAATGAAATTAGAAGAAACACAGCCTCATGGGACAGAAATTTGAGGGA 1998
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1999 GGGGAACAAAGAATACTTTGGGGGGAAAAAAGTTTTAAAAAAGAAATTGAAAATTGCCTTGCAGATATTTAGGT 2072
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2073 ACAATGGAGTTTTCTTTTCCCAAACGGGAAGAACACAGCACACCCGGCTTGGACCCACTGCAAGCTGCATCGTG 2146
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2147 CAACCTCTTTGGTGCCAGTGTGGGCAAGGGCTCAGCCTCTCTGCCCACAGAGTGCCCCCACGTGGAACATTCTG 2220
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2221 GAGCTGGCCATCCCAAATTCAATCAGTCCATAGAGACGAACAGAATGAGACCTTCCGGCCCAAGCGTGGCGCTG 2294
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2295 CGGGCACTTTGGTAGACTGTGCCACCACGGCGTGTGTTGTGAAACGTGAAATAAAAAGAGCAAGAAAGAAAAAG 2368
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2369 GAAACAAAATAAGACCGTCTGACAGCAACAACGGTCCCACAAACAAGTCACAAAAGATACCGTTAAACTTTTTT 2442
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2443 TTTTTTTTATCATTTTACTACATGAACATCATGGATAACAAGGGATTCTGATTCATTATTAATTTCATTAATTA 2516
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2517 TATTTTCTGATATGAGTCTAGAACTTACTGCAAAAACAAGACAAAACTAAAAAAATACAACTGAGAAGGGTGAA 2590
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2591 GAGAAGTATGTTTGTTAAACAGTAAAAATGAATAGTATACTTCTTAACTAGGTTTACAACTGGTGGACCACACA 2664
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2665 CCAGGCACTAATCACCTGGTGAGGATTTGGCATATCCACCAAAAAATGCATCCGATTTAACCAACATCTCCACC 2738
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2739 AGCGCTACGGACTCCTCCCAATTCTGACATCTCTTGCAGACAATACTATGCTCTCTACACACTGTTTAGAAATG 2812
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2813 GAAAGGTGATCTGCACTGTATCTTGGGTTTGTTGGCTATGCTTCCTTTGATGACATATATTATACAGTATATAT 2886
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2887 ATACATATATTTTTTTTGTTAGAGTTCTAGCCATTTTATTTCTCCGCAGGGTCCTTTCTCAGACATTACTGCAT 2960
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2961 GCTGTATATGGCGTTAGCTGTGTGTTGATCTTCTAAAAGATGATAGAGTTTACTGGTAATTGTGTAATCAGCTC 3034
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3035 CTGCCTTTTTATTTTCTTGGGTTATTTACATGTCAGAGACATTTATAAAAAGTGAAAGGATAAAAAAAAAAAAA 3108
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3109 AACAACTAATACCGGGCGCAGCATCTTTCCAGGTGTGGCTCTGCGCTAGGCCACCCCAGGTGGCCCCGCTTTCT 3182
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3183 CCATTCTGCCCTGTGGCGTTAACAGACAGCAAGCAGCTGAACAAGCAGTACCGTCAGTACCCACTTGCTTTAGC 3256
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3257 CCATTATGGGAATCTCTGATGCCTTTGTGACCACTGGAGAGTTTAATCCTCTTGGTTTATTTTATTTCCCACCT 3330
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3331 TTGTGTGAGTGTGTATGAAAGAGAAGAAAATGCAATTTTTAGGTAATCTTTTTTTTTTTTCCCCTCCCCTGAAA 3404
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3405 GTCTGGGAACCTGAGAGTCCTCGGGGAGGGGTCCTGGATGTGATGAGGGAAAGGGGGATTGGGGGATCCGGGAG 3478
Query 949 --------------------------------------------------- 948
Sbjct 3479 GGTGGGGTTGTCTCTGACTTGACATTAAAAAGTGTTCCATGTCCCTCTTCA 3529
