Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08191
- Subject:
- NR_147853.1
- Aligned Length:
- 3496
- Identities:
- 942
- Gaps:
- 2551
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGCCGCAGCGCGCATTTGGGCTCCGAGGAAGTTGACCGAGGCGGCTGCCGCAGGATCCCGGGCCCGGATCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACGAAGCCCGCGCGGCCGTCTCCTCCGCGCGCCACCCCTGCGCCTCCCGCGAGCTCCACTTCCCATCTGCTATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTTTCCGATTGTTTTCCGGTGGCGAGCCCGGCTCCGAAACTTACAAAGTGTTGGATGTCCCCCGTTCGAACTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACTGCAGACCGCCTCTGGGTAGCTGGATGAAGCCCACCCCGTCCCCTTCTGGTACCAAAGTGCTTACTCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCCAAAGTGCCGTGTCTGAACTGCCGCTGGGAAGAAGCGGCTCCTGAGACGCGCCCACACCTTTCACCTGCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCGCTTCCCCCTCCTCGGCCACCTTCCCGGCGGAAGCAGCGAGGAGGGAGCCCCCTTTGGCCGTCCTCCGTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACCGGTTTTCCGAGGCTGGCAAAAGCCGAGGCTGGATTTGGGGGAGGAATATTAGACTCGGAGGAGTCTGCGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTTTTCTCCTCCCCGCGCCTCCCGGTCGCCGCGGGTTCACCGCTCAGTCCCCGCGCTCGCTCCGCACCCCACC 592
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 593 CACTTCCTGTGCTCGCCCGGGGGGCGTGTGCCGTGCGGCTGCCGGAGTTCGGGGAAGTTGTGGCTGTCGAGAAT 666
Query 3 GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC 740
Query 77 CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG 814
Query 151 GAGAGCGCCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCT 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAGAGCGCCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCT 888
Query 225 CTATGCTGGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCA 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTATGCTGGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCA 962
Query 299 TCGAGATCCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAG 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCGAGATCCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAG 1036
Query 373 ACCTCTAGGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACCTCTAGGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA 1110
Query 447 AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC 1184
Query 521 CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCCGGGAGCAGTCAGGGGAC 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1185 CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCAGGGAGCAGTCAGGGGAC 1258
Query 595 TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC 1332
Query 669 ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG 1406
Query 743 TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAA----------------------------------- 781
|||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAAGAGCTGAAATCTCATTCACAGTTTGGTTATGATGG 1480
Query 782 -------------------------------------------------------------------------- 781
Sbjct 1481 GAAAGCTTCCTCCCCATGGTGGACGAATGGTGTCAAAACGGCCAGTGGGATCAATCAGCCTGACTTGCTCGCAG 1554
Query 782 ---------GACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACCTTTCCTCTCAAAACTCATCTTC 846
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AATCCTCCCGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACCTTTCCTCTCAAAACTCATCTTC 1628
Query 847 TTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACAAGCTGGGCCACACCAATGCCAG 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACAAGCTGGGCCACACCAATGCCAG 1702
Query 921 CATCATGCTATTTGGT---------------GAGACTGTGCTC------------------------------- 948
|||||||||||||||| ||| |||..|
Sbjct 1703 CATCATGCTATTTGGTCCAGGCGCCGTCAGCGAG---GTGAGCAACGGCACGTCGAGGAGGGCAGGCTGCGTCT 1773
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1774 GGCTGCTGCCTCTTCTGGTCTTGCACCTGCTTCTCAAATTTTGATGTGAGTGCCACTTCCCCACCCGGGAAAGG 1847
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1848 CTGCCGCCACCACCACCACCAACACAACAGCAATGGCAACACCGACAGCAACCAATCAGATATATACAAATGAA 1921
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1922 ATTAGAAGAAACACAGCCTCATGGGACAGAAATTTGAGGGAGGGGAACAAAGAATACTTTGGGGGGAAAAAAGT 1995
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1996 TTTAAAAAAGAAATTGAAAATTGCCTTGCAGATATTTAGGTACAATGGAGTTTTCTTTTCCCAAACGGGAAGAA 2069
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2070 CACAGCACACCCGGCTTGGACCCACTGCAAGCTGCATCGTGCAACCTCTTTGGTGCCAGTGTGGGCAAGGGCTC 2143
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2144 AGCCTCTCTGCCCACAGAGTGCCCCCACGTGGAACATTCTGGAGCTGGCCATCCCAAATTCAATCAGTCCATAG 2217
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2218 AGACGAACAGAATGAGACCTTCCGGCCCAAGCGTGGCGCTGCGGGCACTTTGGTAGACTGTGCCACCACGGCGT 2291
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2292 GTGTTGTGAAACGTGAAATAAAAAGAGCAAGAAAGAAAAAGGAAACAAAATAAGACCGTCTGACAGCAACAACG 2365
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2366 GTCCCACAAACAAGTCACAAAAGATACCGTTAAACTTTTTTTTTTTTTTATCATTTTACTACATGAACATCATG 2439
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2440 GATAACAAGGGATTCTGATTCATTATTAATTTCATTAATTATATTTTCTGATATGAGTCTAGAACTTACTGCAA 2513
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2514 AAACAAGACAAAACTAAAAAAATACAACTGAGAAGGGTGAAGAGAAGTATGTTTGTTAAACAGTAAAAATGAAT 2587
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2588 AGTATACTTCTTAACTAGGTTTACAACTGGTGGACCACACACCAGGCACTAATCACCTGGTGAGGATTTGGCAT 2661
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2662 ATCCACCAAAAAATGCATCCGATTTAACCAACATCTCCACCAGCGCTACGGACTCCTCCCAATTCTGACATCTC 2735
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2736 TTGCAGACAATACTATGCTCTCTACACACTGTTTAGAAATGGAAAGGTGATCTGCACTGTATCTTGGGTTTGTT 2809
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2810 GGCTATGCTTCCTTTGATGACATATATTATACAGTATATATATACATATATTTTTTTTGTTAGAGTTCTAGCCA 2883
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2884 TTTTATTTCTCCGCAGGGTCCTTTCTCAGACATTACTGCATGCTGTATATGGCGTTAGCTGTGTGTTGATCTTC 2957
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2958 TAAAAGATGATAGAGTTTACTGGTAATTGTGTAATCAGCTCCTGCCTTTTTATTTTCTTGGGTTATTTACATGT 3031
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3032 CAGAGACATTTATAAAAAGTGAAAGGATAAAAAAAAAAAAAAACAACTAATACCGGGCGCAGCATCTTTCCAGG 3105
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3106 TGTGGCTCTGCGCTAGGCCACCCCAGGTGGCCCCGCTTTCTCCATTCTGCCCTGTGGCGTTAACAGACAGCAAG 3179
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3180 CAGCTGAACAAGCAGTACCGTCAGTACCCACTTGCTTTAGCCCATTATGGGAATCTCTGATGCCTTTGTGACCA 3253
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3254 CTGGAGAGTTTAATCCTCTTGGTTTATTTTATTTCCCACCTTTGTGTGAGTGTGTATGAAAGAGAAGAAAATGC 3327
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3328 AATTTTTAGGTAATCTTTTTTTTTTTTCCCCTCCCCTGAAAGTCTGGGAACCTGAGAGTCCTCGGGGAGGGGTC 3401
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3402 CTGGATGTGATGAGGGAAAGGGGGATTGGGGGATCCGGGAGGGTGGGGTTGTCTCTGACTTGACATTAAAAAGT 3475
Query 949 ------------------ 948
Sbjct 3476 GTTCCATGTCCCTCTTCA 3493
