Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08191
- Subject:
- XR_001747893.1
- Aligned Length:
- 3881
- Identities:
- 944
- Gaps:
- 2933
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGACCGCCTCTGGGTAGCTGGATGAAGCCCACCCCGTCCCCTTCTGGTACCAAAGTGCTTACTCCTCTCCAAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCCGTGTCTGAACTGCCGCTGGGAAGAAGCGGCTCCTGAGACGCGCCCACACCTTTCACCTGCCGCGCGCTTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCCTCCTCGGCCACCTTCCCGGCGGAAGCAGCGAGGAGGGAGCCCCCTTTGGCCGTCCTCCGTGGAACCGGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCCGAGGCTGGCAAAAGCCGAGGCTGGATTTGGGGGAGGAATATTAGACTCGGAGGAGTCTGCGCGCTTTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTCCCCGCGCCTCCCGGTCGCCGCGGGTTCACCGCTCAGTCCCCGCGCTCGCTCCGCACCCCACCCACTTCCT 370
Query 1 ----------------------------------------------------------------ATGGGGGTCT 10
||||||||||
Sbjct 371 GTGCTCGCCCGGGGGGCGTGTGCCGTGCGGCTGCCGGAGTTCGGGGAAGTTGTGGCTGTCGAGAATGGGGGTCT 444
Query 11 GTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTACCCACAGGA 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTACCCACAGGA 518
Query 85 GTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGGGAGAGCGC 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGGGAGAGCGC 592
Query 159 CACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCTCTATGCTG 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCTCTATGCTG 666
Query 233 GGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCATCGAGATC 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCATCGAGATC 740
Query 307 CAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAGACCTCTAG 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAGACCTCTAG 814
Query 381 GGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGAAGGGAACA 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGAAGGGAACA 888
Query 455 ATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTCCCAAAGCG 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTCCCAAAGCG 962
Query 529 GTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCCGGGAGCAGTCAGGGGACTACGAGTG 602
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 963 GTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCAGGGAGCAGTCAGGGGACTACGAGTG 1036
Query 603 CAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACCATACATTT 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACCATACATTT 1110
Query 677 CAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAGTCCCCTCA 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAGTCCCCTCA 1184
Query 751 GCAGAATTCCAGTGGTACAAGGATGACAAAAGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACC 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCAGAATTCCAGTGGTACAAGGATGACAAAAGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACC 1258
Query 825 TTTCCTCTCAAAACTCATCTTCTTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACA 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTTCCTCTCAAAACTCATCTTCTTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACA 1332
Query 899 AGCTGGGCCACACCAATGCCAGCATCATGCTATTTG------GTGAGACT--GTGCTC---------------- 948
|||||||||||||||||||||||||||||||||||| .||||.|| |.||||
Sbjct 1333 AGCTGGGCCACACCAATGCCAGCATCATGCTATTTGAACTAAATGAGCCTACGAGCTCAACTTTGTTGCAAGAA 1406
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1407 GTGAAAACTACAGCCCTGACCCCTTGGAAAGGTTTGTATATTTTTCAGACAGCTGCTGCCTTGGTGGGTGTGGG 1480
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1481 GTATGTAAAACTCTTCACCTTCCTCCCAGATGCCTTCTTTCCTGAGCTAACTCCAGGAAGCAGCGCAGAGGGAA 1554
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1555 CCCTCCCCCAACCTTCAACCATCTCCGTGTCAATTTAGATTAACCCCATCCTCAAGGACATCCAATCCTTCCTA 1628
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1629 GGTAGATCCCACTTGCAGTAGCCTAACTTCTCTTTGCTGGTGGCACTAATGAGCACCTGTCAGTGCCCAGAATA 1702
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1703 GCTCCATCTCTGGGCTACTCTGCACCAGGCCTGCCTCTTTCCTCACACACGGATGCTCTAATGCAGCGATCTTC 1776
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1777 TCAGACCTTGGCCCTGCATGCTGCCCTTGCTTGCACCATTCTTTCTATCTCTCTAACTTGGAGCTGGAAGGGAA 1850
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1851 GTGGCAAGGGGAGGGGAAGATGGGAGGAAGGGGGAGGTTCTTGGGTGAGTCACTTGGCTACGAATAAAATGCAT 1924
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1925 CTTATTTGAAGCTTTCATTCCTGCCAGATGTTTCCGATGGATAATTGACACTCATCACCGTTCTCTGGGACCCT 1998
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1999 AACTGTCCTGGTAATTAGTCTCTTTAGGCCTCCGCAGCTCTCTAATGAGATAGAGGCAATAAAGGCATTCACTG 2072
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2073 TGGAGTGGAGGCGTGGCTGAATGAAGAATGGAGGCCTCATCTGCGTGGCCCATGTCACTAGGCAGATGGGCTGA 2146
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2147 GCTGTAGCTCTGACCAGCACTGGCTTTGAGAGGGCCTTGATCCCAGGGTGCTGTGGTCCACGCCCACCTGGACC 2220
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2221 TAAGGTCTTCATCTCATCTCATGGAATCCTTCCACATAGCATTCATTCATTCAGTGTGGGATGGCCTGCGGGAA 2294
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2295 GCAGCCCAGTGGCACGCCTGCGGTTCTCACCTTTTAACCTGTACCCAGGTGGAGCAGGCCATGCAGCCACACTC 2368
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2369 TCTTCTCTTTATTCTCTGAAGATGCATCTCTGAGATAGTGGGAAGATAGTTGCATTTGAAGACAGAAGTCAAGA 2442
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2443 GACTTGGGAAAGTCACTTAAGCTTCCTGAAGTTCAGTTTCCACATGGTAGAAAGGGAGATAATAATTCTCATCT 2516
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2517 CCTACATGAGTGTCATTAAGGTGTTGTGATAGCTTTCCCAGTGCAAGCGCTCTATCTGAAATCCTAACTGACAT 2590
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2591 GGCTTTGCTTCTATGTAGATAGACACTCAGCCACAGGAATTCTCAGTAAGTTGTATTGGATATAGTTAGAAAAG 2664
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2665 GGGAGGAAAGGTATTTGGAAGAGGAAATTGAGGTAAGGCAGAGGGCAAGGTATGAAAAAAGTTTTTGTTTTATT 2738
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2739 TTTTCTTCAAGTACAATTTTAAGCAAAAGTAAAACACAAAGACAAATAAATGTGGATATGTCAGCATGAGTGGC 2812
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2813 AATGCCCCCTCCTTCTTTCAACAAACATTGGTTGAATACCTGCCACGGGCCAATGAGATACAGACTCTGCTCTT 2886
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2887 AAGGAACTTACTGCACAGAGGACAGAGGAGGAAATACAAATAAGTTAGGCAAAGAGAATTATGACACAGGGTGG 2960
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2961 TAAGTATTTTACTAGTGGGATGTGTATGGCACTGAGCAAGGCAGGGAAGGCTGCCTGCAAGAGGTGCTGAAGGC 3034
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3035 TGGAAGAGGAGCTGGAATGAAGAATAAGAGTGATATGGGTGAGACATATTTCGGACGGAGGGGAGAGTGTGTGA 3108
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3109 GGGTGGGGAAAAAAGACCCGCCCCTGTGTGCTCACATGTGGTTATGTGGCAAGGGGCAAGGGCACCAAACTAGG 3182
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3183 TGTGGCAAGAAGAGACACCAAGGCTGCAGACTGCAGGCACATCACGAAATGTAGTGCTCGGTCCACTGAGAAGC 3256
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3257 TGGACTTGGTGCTAGCCTGTTGGCCTCAAATCAATGAGGATCATGATCGATTTGGGGTAGAAACATCACCTTGG 3330
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3331 AATTCGCATAAAGAATAAATTCCAGGGGTCAAGGCCACAGGTGGCAAGGTCCAATTGGTGAACATTTTTGGGAA 3404
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3405 TTGAAAGATGAGATGGTGCAGAGTATCTCCTTTGGGAGGATGTCTCATTTGAGAGAATGCCCCTGCCTCGGGGC 3478
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3479 TACCCCTGTTTCCTTCTCCTTCTGTCCAACTTGGTCCAGGTCTGGTGTCCTGGATGTGCTGCTGAAGAGACAGG 3552
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3553 TTCCGGGGGTGGTGAGCGCATGTACCTGTGGGGTGGGCTGCGCAGACTGGATATGGTCACATAGTGCCAGCCAC 3626
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3627 TCACCAGCCTGAGATGGAGATGATGATGATGGAGAGCTTCAGAGGGGCTGCTCAGGCTTTTCCCAGATATACTA 3700
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3701 CAAGCAAGAGAATGGCTGGCAGGCACTTGGTGGCCTTTTTCTGTCTTCCATAGGAAGAATTTTCTAACACAACA 3774
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3775 AACAGGTCCAGGCGCCGTCAGCGAGGTGAGCAACGGCACGTCGAGGAGGGCAGGCTGCGTCTGGCTGCTGCCTC 3848
Query 949 --------------------------------- 948
Sbjct 3849 TTCTGGTCTTGCACCTGCTTCTCAAATTTTGAT 3881
