Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08191
Subject:
XR_001747893.1
Aligned Length:
3881
Identities:
944
Gaps:
2933

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCGCCTCTGGGTAGCTGGATGAAGCCCACCCCGTCCCCTTCTGGTACCAAAGTGCTTACTCCTCTCCAAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCCGTGTCTGAACTGCCGCTGGGAAGAAGCGGCTCCTGAGACGCGCCCACACCTTTCACCTGCCGCGCGCTTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCCTCCTCGGCCACCTTCCCGGCGGAAGCAGCGAGGAGGGAGCCCCCTTTGGCCGTCCTCCGTGGAACCGGTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTCCGAGGCTGGCAAAAGCCGAGGCTGGATTTGGGGGAGGAATATTAGACTCGGAGGAGTCTGCGCGCTTTTCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCTCCCCGCGCCTCCCGGTCGCCGCGGGTTCACCGCTCAGTCCCCGCGCTCGCTCCGCACCCCACCCACTTCCT  370

Query    1  ----------------------------------------------------------------ATGGGGGTCT  10
                                                                            ||||||||||
Sbjct  371  GTGCTCGCCCGGGGGGCGTGTGCCGTGCGGCTGCCGGAGTTCGGGGAAGTTGTGGCTGTCGAGAATGGGGGTCT  444

Query   11  GTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTACCCACAGGA  84
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTACCCACAGGA  518

Query   85  GTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGGGAGAGCGC  158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGGGAGAGCGC  592

Query  159  CACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCTCTATGCTG  232
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCTCTATGCTG  666

Query  233  GGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCATCGAGATC  306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCATCGAGATC  740

Query  307  CAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAGACCTCTAG  380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAGACCTCTAG  814

Query  381  GGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGAAGGGAACA  454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGAAGGGAACA  888

Query  455  ATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTCCCAAAGCG  528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTCCCAAAGCG  962

Query  529  GTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCCGGGAGCAGTCAGGGGACTACGAGTG  602
            ||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct  963  GTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCAGGGAGCAGTCAGGGGACTACGAGTG  1036

Query  603  CAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACCATACATTT  676
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACCATACATTT  1110

Query  677  CAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAGTCCCCTCA  750
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAGTCCCCTCA  1184

Query  751  GCAGAATTCCAGTGGTACAAGGATGACAAAAGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACC  824
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GCAGAATTCCAGTGGTACAAGGATGACAAAAGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACC  1258

Query  825  TTTCCTCTCAAAACTCATCTTCTTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACA  898
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TTTCCTCTCAAAACTCATCTTCTTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACA  1332

Query  899  AGCTGGGCCACACCAATGCCAGCATCATGCTATTTG------GTGAGACT--GTGCTC----------------  948
            ||||||||||||||||||||||||||||||||||||      .||||.||  |.||||                
Sbjct 1333  AGCTGGGCCACACCAATGCCAGCATCATGCTATTTGAACTAAATGAGCCTACGAGCTCAACTTTGTTGCAAGAA  1406

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1407  GTGAAAACTACAGCCCTGACCCCTTGGAAAGGTTTGTATATTTTTCAGACAGCTGCTGCCTTGGTGGGTGTGGG  1480

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1481  GTATGTAAAACTCTTCACCTTCCTCCCAGATGCCTTCTTTCCTGAGCTAACTCCAGGAAGCAGCGCAGAGGGAA  1554

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1555  CCCTCCCCCAACCTTCAACCATCTCCGTGTCAATTTAGATTAACCCCATCCTCAAGGACATCCAATCCTTCCTA  1628

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1629  GGTAGATCCCACTTGCAGTAGCCTAACTTCTCTTTGCTGGTGGCACTAATGAGCACCTGTCAGTGCCCAGAATA  1702

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1703  GCTCCATCTCTGGGCTACTCTGCACCAGGCCTGCCTCTTTCCTCACACACGGATGCTCTAATGCAGCGATCTTC  1776

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1777  TCAGACCTTGGCCCTGCATGCTGCCCTTGCTTGCACCATTCTTTCTATCTCTCTAACTTGGAGCTGGAAGGGAA  1850

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1851  GTGGCAAGGGGAGGGGAAGATGGGAGGAAGGGGGAGGTTCTTGGGTGAGTCACTTGGCTACGAATAAAATGCAT  1924

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1925  CTTATTTGAAGCTTTCATTCCTGCCAGATGTTTCCGATGGATAATTGACACTCATCACCGTTCTCTGGGACCCT  1998

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1999  AACTGTCCTGGTAATTAGTCTCTTTAGGCCTCCGCAGCTCTCTAATGAGATAGAGGCAATAAAGGCATTCACTG  2072

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2073  TGGAGTGGAGGCGTGGCTGAATGAAGAATGGAGGCCTCATCTGCGTGGCCCATGTCACTAGGCAGATGGGCTGA  2146

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2147  GCTGTAGCTCTGACCAGCACTGGCTTTGAGAGGGCCTTGATCCCAGGGTGCTGTGGTCCACGCCCACCTGGACC  2220

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2221  TAAGGTCTTCATCTCATCTCATGGAATCCTTCCACATAGCATTCATTCATTCAGTGTGGGATGGCCTGCGGGAA  2294

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2295  GCAGCCCAGTGGCACGCCTGCGGTTCTCACCTTTTAACCTGTACCCAGGTGGAGCAGGCCATGCAGCCACACTC  2368

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2369  TCTTCTCTTTATTCTCTGAAGATGCATCTCTGAGATAGTGGGAAGATAGTTGCATTTGAAGACAGAAGTCAAGA  2442

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2443  GACTTGGGAAAGTCACTTAAGCTTCCTGAAGTTCAGTTTCCACATGGTAGAAAGGGAGATAATAATTCTCATCT  2516

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2517  CCTACATGAGTGTCATTAAGGTGTTGTGATAGCTTTCCCAGTGCAAGCGCTCTATCTGAAATCCTAACTGACAT  2590

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2591  GGCTTTGCTTCTATGTAGATAGACACTCAGCCACAGGAATTCTCAGTAAGTTGTATTGGATATAGTTAGAAAAG  2664

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2665  GGGAGGAAAGGTATTTGGAAGAGGAAATTGAGGTAAGGCAGAGGGCAAGGTATGAAAAAAGTTTTTGTTTTATT  2738

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2739  TTTTCTTCAAGTACAATTTTAAGCAAAAGTAAAACACAAAGACAAATAAATGTGGATATGTCAGCATGAGTGGC  2812

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2813  AATGCCCCCTCCTTCTTTCAACAAACATTGGTTGAATACCTGCCACGGGCCAATGAGATACAGACTCTGCTCTT  2886

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2887  AAGGAACTTACTGCACAGAGGACAGAGGAGGAAATACAAATAAGTTAGGCAAAGAGAATTATGACACAGGGTGG  2960

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2961  TAAGTATTTTACTAGTGGGATGTGTATGGCACTGAGCAAGGCAGGGAAGGCTGCCTGCAAGAGGTGCTGAAGGC  3034

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3035  TGGAAGAGGAGCTGGAATGAAGAATAAGAGTGATATGGGTGAGACATATTTCGGACGGAGGGGAGAGTGTGTGA  3108

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3109  GGGTGGGGAAAAAAGACCCGCCCCTGTGTGCTCACATGTGGTTATGTGGCAAGGGGCAAGGGCACCAAACTAGG  3182

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3183  TGTGGCAAGAAGAGACACCAAGGCTGCAGACTGCAGGCACATCACGAAATGTAGTGCTCGGTCCACTGAGAAGC  3256

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3257  TGGACTTGGTGCTAGCCTGTTGGCCTCAAATCAATGAGGATCATGATCGATTTGGGGTAGAAACATCACCTTGG  3330

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3331  AATTCGCATAAAGAATAAATTCCAGGGGTCAAGGCCACAGGTGGCAAGGTCCAATTGGTGAACATTTTTGGGAA  3404

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3405  TTGAAAGATGAGATGGTGCAGAGTATCTCCTTTGGGAGGATGTCTCATTTGAGAGAATGCCCCTGCCTCGGGGC  3478

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3479  TACCCCTGTTTCCTTCTCCTTCTGTCCAACTTGGTCCAGGTCTGGTGTCCTGGATGTGCTGCTGAAGAGACAGG  3552

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3553  TTCCGGGGGTGGTGAGCGCATGTACCTGTGGGGTGGGCTGCGCAGACTGGATATGGTCACATAGTGCCAGCCAC  3626

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3627  TCACCAGCCTGAGATGGAGATGATGATGATGGAGAGCTTCAGAGGGGCTGCTCAGGCTTTTCCCAGATATACTA  3700

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3701  CAAGCAAGAGAATGGCTGGCAGGCACTTGGTGGCCTTTTTCTGTCTTCCATAGGAAGAATTTTCTAACACAACA  3774

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3775  AACAGGTCCAGGCGCCGTCAGCGAGGTGAGCAACGGCACGTCGAGGAGGGCAGGCTGCGTCTGGCTGCTGCCTC  3848

Query  949  ---------------------------------  948
                                             
Sbjct 3849  TTCTGGTCTTGCACCTGCTTCTCAAATTTTGAT  3881

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