Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08210
- Subject:
- XR_001782128.1
- Aligned Length:
- 3130
- Identities:
- 855
- Gaps:
- 2239
Alignment
Query 1 -----------------ATGTCCAACCGAGTGGTCTGCCGAGAAGCCAGTCACGCCGGGAGCTGGTACACAGCC 57
|||||||||||||||||||||||.||||||||.||||||||||||||||||||.|||
Sbjct 1 GCGGCACAGGCACCAAGATGTCCAACCGAGTGGTCTGCCGGGAAGCCAGCCACGCCGGGAGCTGGTACACCGCC 74
Query 58 TCAGGACCGCATCTGAATGCACAGCTAGAAGGTTGGCTTTCACAAGTACAGTCTACAAAAAGACCTGCTAGAGC 131
||||||||.||.|||||.||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 75 TCAGGACCTCAGCTGAACGCTCAGCTGGAAGGTTGGCTTTCACAAGTACAGTCTACGAAAAGACCTGCTAGAGC 148
Query 132 CATTATTGCCCCCCATGCAGGATATACGTACTGTGGGTCTTGTGCTGCCCATGCTTATAAACAAGTGGATCCGT 205
|||||||||.||||||||.|||||.||.|||||||||||.|||||||||||||||||.||||||||||||||.|
Sbjct 149 CATTATTGCACCCCATGCGGGATACACATACTGTGGGTCCTGTGCTGCCCATGCTTACAAACAAGTGGATCCAT 222
Query 206 CTATTACCCGGAGAATTTTCATCCTTGGGCCTTCTCATCATGTGCCCCTCTCTCGATGTGCACTTTCCAGTGTG 279
||.|||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||.|||||||||
Sbjct 223 CTGTTACCCGGAGAATTTTCATCCTTGGGCCTTCCCATCATGTGCCCCTGTCTCGATGTGCACTCTCCAGTGTG 296
Query 280 GATATATATAGGACACCTCTGTATGACCTTCGTATTGACCAAAAGATTTACGGAGAACTGTGGAAGACAGGAAT 353
||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.||.||||||||||||||
Sbjct 297 GATATATATAGGACTCCTCTGTATGATCTTCGTATTGACCAAAAGATTTACGGAGAGCTATGGAAGACAGGAAT 370
Query 354 GTTTGAACGCATGTCTCTGCAGACAGATGAAGATGAACACAGTATTGAAATGCATTTGCCTTATACAGCTAAAG 427
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTTTGAACGAATGTCTCTGCAGACAGATGAAGATGAACACAGTATTGAAATGCATTTGCCTTATACAGCTAAAG 444
Query 428 CCATGGAAA----------------------------------------------------------------- 436
|||||||||
Sbjct 445 CCATGGAAAGATGCAGATTCTGCCCTCGAAGCCCCTGCATTGCAGAGGGACTGGAGATCTGTATGATCTTTATT 518
Query 437 --------------GCCATAAGGATGAGTTTACCATTATTCCTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAG 496
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCGCAGTTGACAAGGCCATAAAGATGAGTTTACCATTATTCCTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAG 592
Query 497 AACAGGAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCTAGTAATCTCTTTGTGGTTTCTTCTGATTTC 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AACAGGAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCTAGTAATCTCTTTGTGGTTTCTTCTGATTTC 666
Query 571 TGCCATTGGGGTCAAAGGTTCCGTTACAGTTACTATGATGAATCCCAGGGGGAGATTTATAGATCCATTGAACA 644
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGCCACTGGGGTCAAAGGTTCCGTTACAGTTACTATGATGAATCCCAGGGGGAGATTTATAGATCCATTGAACA 740
Query 645 TCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGACCCTGTATCTTTTAGCAATTACTTGAAGAAATACC 718
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.|
Sbjct 741 TCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGATCCTGTATCTTTTAGCAATTATTTGAAGAAATATC 814
Query 719 ATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAATGCTATCACAGAGCTCCAGAAGAATGGAATG 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 815 ATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAATGCTATCACAGAGCTTCAGAAGAATGGAATG 888
Query 793 AATATGAGTTTTTCGTTTTTGAATTATGCCCAGTCGAGCCAGTGTAGAAACTGGCAAGACAGTTCAGTGAGTTA 866
||||||||.|||||.||||||||||||||||||||||||||||||||||.||||||||||||||||||.|||||
Sbjct 889 AATATGAGCTTTTCCTTTTTGAATTATGCCCAGTCGAGCCAGTGTAGAAGCTGGCAAGACAGTTCAGTCAGTTA 962
Query 867 TGCAGCTGGAGCACTCACGGTCCAC------------------------------------------------- 891
.||||||||||||||||||||||||
Sbjct 963 CGCAGCTGGAGCACTCACGGTCCACTGAAGCTCCGATCCTCAGGGACACCACCTGCACAGACTCGTACTCTGTC 1036
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1037 CAGGGTCCAGCCTAGCCTTTACCAAGATGTTGGTTCTGGTGTGGGGGGATTCTGAAACCTCAGACTAATAGAAC 1110
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1111 TCTCTTCTTCTTTTCTAGTAGGTGTAGTCCTCCTTAATTTCAACTCATTTTAAAAATGCTTTCTAGTTTGAGGC 1184
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1185 AGTGGAAGGAAGGCTGGAATCAAAATATTTGCCCAAATTGGCACACAGTGACTTGTAAAGCATTTAGCATATCT 1258
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1259 GAAATTTGCACTCTTTGCAGACTCATGCACATATATTCCGCTTTCAGAATAGTTTTGCAAATTGTACACAGACA 1332
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1333 AAGGGTGGAAGCTTTTTAATAAAAGAAACTGCATTTATAAATGATCTGTATTAGAATATAAGAAATCTCCAGTT 1406
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1407 ATAGACAATTACTACCCATGTTGTACAACAGATACCTTCTATTTTAGTTGCTAATAAAGGGCTACACAACTCAA 1480
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1481 AATAGTCTGATTTAAACTTATTGCTTTGTGGTATAAATGGAAATTGTTTTTTATTAATTCTATCTCAGAATTTT 1554
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1555 TGTTAAAATGGCAAGCCTCAGCTTCGATGTAATAATGTTAAAATTATTTTATTTTTACATTTATGTGATTTTTT 1628
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1629 TTTAAATCACAGAAATTATAGTCATATTTTAAAGTTAACTTTCAAAACTATAGTCATTGCATTTTTGTGTGTGA 1702
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1703 CATACCCTCATGTCATTATTATATTGTACTACAATATAAATTCAAGGATGCTTTAAAAACAAGTAGATTTATTC 1776
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1777 CTTTCCTCCAATGACTGTGTTCGGTAGTCTGCACATGAAGATATTGAAGAGTGTCATTAGTTGTGTTTCAAGTT 1850
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1851 GTTGCAGACCATCACCACTATGGTTTTTTGTTTGTTTGTTTGTTTTTATTGCTTTAAGCAATTTAACTCTTTCA 1924
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1925 CTTGAATTTTTAGCAAGAAATCATTAACAATATTAGTAACAAGGCCTATTGGACTTCTGATAGTCCTGCAAAAA 1998
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1999 ATTTGTTTGGGGAGGGCATGATTTTTGGTGCGGCTCTTCCAACTAAAATAATGGTATGGTGTTGTATTTCTTTA 2072
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2073 TCATAGATTTATTCTAGTCATTTTGGGGAGGAAAGTGTTAACTCATTAAGCCATCATGCATGTTGTTCATCATC 2146
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2147 CCTGTTTTACCAACACTGGATGTTTCTATAACATTGGAGAGTGTTAGTCTTCAGTGTTATACCCAAGTAGCACA 2220
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2221 AGCTTTAGATGCCTTGCACCAATTTTCTTTTGGAGATTTACGTTTCTTACTTATTAAATACCAATTTTCTATTC 2294
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2295 TCAAGAATGGGAGAAAATAATACTACCTTTTAGATTTAAAATTTACCTACTTATACATGTAGGAAATATACTCT 2368
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2369 TATACATCAGTGTTTTATTTTCCATTATTTAGATACGCTTTTGAGTACTATAAATATTTATTTCTTGTTTAATA 2442
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2443 CAGATTATAAAAATTTCTGAATTGACAATAGTGAATTTTTAAAATAATGTTTTCTGAGTATAGAATTTGAAAAT 2516
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2517 ACTGAAAAGTCAGAAGAAAAAATCTATTACCTACAATCTCACTACTCCAGAGATAACACTGTTAAATGTTTTTC 2590
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2591 TGTATTTACTTGTAGTCCTTGTGTTTTTTATGAGTGTGTATGTGTGTGTGTGTGTGTGTGCAACAACAGAATTG 2664
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2665 AGATTATAGTGCCCATACATTTGCGTTATGCCCTGTTATCCTAAGTATCTACTACCTGTGTCTCTGAAAGCACT 2738
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2739 ATTTTAAAAATGCCTGCCTAATATGCTATACTGTATGAAAATAGTTCTCTCTTTGGATGTTAGGCTGTTTCTAA 2812
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2813 TTTTCCTCAATTTTATAATGGTACGGACATTCTGTGTAAATTAGACCCAGTCTCTAGGATATAATCATGAAAAT 2886
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2887 GAAATAAATGGTTTACATGATAATTTTGTAGGCCCTTTAAAAGTATGCCAAATTATATTTTCAATAGATTGTAT 2960
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2961 CAAATTAACAGCACCCCCACATCAGCATCGTTTCTTTTAATTTTTGAAAAATTGTTAAGCAAGTAATTGTTTCT 3034
Query 892 -------------------------------------------------------------------------- 891
Sbjct 3035 TTTTTAAAGACTTTCTTTCGAATTAGTCATTTATTGTCTTTTATAAATTTAGAATGTTTTTTTTGAAAAACAAC 3108
Query 892 ---------------------- 891
Sbjct 3109 ATTAAAGAGACGTCTAGTTCTA 3130
