Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08341
- Subject:
- XR_001755249.1
- Aligned Length:
- 1688
- Identities:
- 769
- Gaps:
- 919
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AACCGAGAGGCGAAGGGCAAGGGGCGAAGGGCAAGCGCCGGATCCTTTCGCCCCCTCCCCACGTGAGGCCCTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCTGATTGGCCGTGTGCTGCGGAGGCGGCAAGAGGAACGTGTCCTGGCACGTGCCGAAGGAGCGCTAAAGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGGGCGGTCCCACCCGCGAAGCCCTGGAAGGCGGATTGGCTGCGCGAGGAAGTGGCGTGTCCTCACTTGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTCTGGGAGCGAGAGTAAGAGATAAAGGCAAGGGCGCCTGACCGGGCCTGGGCACCTCCTCCCACTGCGGGCA 296
Query 1 ------------------------------------------------ATGGCGGGCGCTGAGTGGAAGTCGCT 26
||||||||||||||||||||||||||
Sbjct 297 AAGGGCAGGCAGTTCGTGCGCGGACACAAGCACTGGCGGACCGTGGCCATGGCGGGCGCTGAGTGGAAGTCGCT 370
Query 27 GGAGGAATGCTTGGAGAAGCACCTGCCGCTCCCCGACTTGCAGGAAGTGAAGCGCGTTCTCTATGGCAAGGAAC 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGAGGAATGCTTGGAGAAGCACCTGCCGCTCCCCGACTTGCAGGAAGTGAAGCGCGTTCTCTATGGCAAGGAAC 444
Query 101 TCAGGAAGCTTGATCTGCCCAGGGAAGCTTTCGAAGCTGCCTCCAGAGAAGACTTTGAACTGCAGGGATATGCC 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCAGGAAGCTTGATCTGCCCAGGGAAGCTTTCGAAGCTGCCTCCAGAGAAGACTTTGAACTGCAGGGATATGCC 518
Query 175 TTTGAAGCAGCGGAGGAGCAGCTGAGACGACCCCGCATTGTGCACGTGGGGCTGGTTCAGAACAGAATCCCCCT 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTTGAAGCAGCGGAGGAGCAGCTGAGACGACCCCGCATTGTGCACGTGGGGCTGGTTCAGAACAGAATCCCCCT 592
Query 249 CCCCGCAAATGCCCCTGTGGCAGAACAGGTCTCTGCCCTTCATAGACGCATAAAGGCTATCGTAGAGGTGGCTG 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCCCGCAAATGCCCCTGTGGCAGAACAGGTCTCTGCCCTTCATAGACGCATAAAGGCTATCGTAGAGGTGGCTG 666
Query 323 CAATGTGTGGAGTCAACATCATCTGTTTCCAGGAAGCATGGA-------------------------------- 364
||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAATGTGTGGAGTCAACATCATCTGTTTCCAGGAAGCATGGACGGCAGGGCTCGGTCACGCTGGACACAGTTTC 740
Query 365 -------------------------------------------------CTATGCCCTTTGCCTTCTGTACGAG 389
|||||||||||||||||||||||||
Sbjct 741 CAGATCTACACCACACCGAGATGGCTCAAGCCAAGTGGCCAGAGGATCTCTATGCCCTTTGCCTTCTGTACGAG 814
Query 390 AGAGAAGCTTCCTTGGACAGAATTTGCTGAGTCAGCAGAGGATGGGCCCACCACCAGATTCTGTCAGAAGCTGG 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAGAAGCTTCCTTGGACAGAATTTGCTGAGTCAGCAGAGGATGGGCCCACCACCAGATTCTGTCAGAAGCTGG 888
Query 464 CGAAGAACCATGACATGGTGGTGGTGTCTCCCATCCTGGAACGAGACAGCGAGCATGGGGATGTTTTGTGGAAT 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGAAGAACCATGACATGGTGGTGGTGTCTCCCATCCTGGAACGAGACAGCGAGCATGGGGATGTTTTGTGGAAT 962
Query 538 ACAGCCGTGGTGATCTCCAATTCCGGAGCAGTCCTGGGAAAGACCAGGAAAAACCACATCCCCAGAGTGGGTGA 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACAGCCGTGGTGATCTCCAATTCCGGAGCAGTCCTGGGAAAGACCAGGAAAAACCACATCCCCAGAGTGGGTGA 1036
Query 612 TTTCAACGAGTCAACTTACTACATGGAGGGAAACCTGGGCCACCCCGTGTTCCAGACGCAGTTCGGAAGGATCG 685
||||||||
Sbjct 1037 TTTCAACG------------------------------------------------------------------ 1044
Query 686 CGGTGAACATTTGCTACGGGCGGCACCACCCCCTCAACTGGCTTATGTACAGCATCAACGGGGCTGAGATCATC 759
Sbjct 1045 -------------------------------------------------------------------------- 1044
Query 760 TTCAACCCCTCGGCCACGATAGGAGCACTCAGCGAGTCCCTGTGGCCCATCGAGGCCAGAAACGCAGCCATTGC 833
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1045 ------------------------------AGCGAGTCCCTGTGGCCCATCGAGGCCAGAAACGCAGCCATTGC 1088
Query 834 CAATCACTGCTTCACCTGCGCCATCAATCGAGTGGGCACC---------------------------------- 873
||||||||||||||||||||||||||||||||||||||||
Sbjct 1089 CAATCACTGCTTCACCTGCGCCATCAATCGAGTGGGCACCATTATGAACTCCCCAAAGGCACCATCCAGGTTTT 1162
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1163 TACCCCGCTTGTCAAATTCCCCTCTGGCCCAGGGCTGGCTGCTCAGCAGGAGTGTTTAATAAGCACTTAATTGC 1236
Query 874 ---GAGCACTTCCCGAACGAGTTTACCTCGGGAGATGGAAAGAAAGCTCACCAGGACTTTGGCTACTTTTATGG 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1237 CCGGAGCACTTCCCGAACGAGTTTACCTCGGGAGATGGAAAGAAAGCTCACCAGGACTTTGGCTACTTT----- 1305
Query 945 CTCGAGCTATGTGGCAGCCCCTGACAGCAGCCGGACTCCTGGGCTGTCCCGTAGCCGGGATGGACTGCTAGTTG 1018
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1019 CTAAGCTCGACCTAAACCTCTGCCAGCAGGTGAATGATGTCTGGAACTTCAAGATGACGGGCAGGTATGAGATG 1092
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1093 TACGCACGGGAGCTCGCCGAAGCTGTCAAGTCCAACTACAGCCTCACCATCGTGAAAGAG 1152
Sbjct 1306 ------------------------------------------------------------ 1305
