Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08344
- Subject:
- NM_001085508.2
- Aligned Length:
- 1459
- Identities:
- 847
- Gaps:
- 488
Alignment
Query 1 ATGAACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGG 74
|||||||||||||||||.||.||||.||||||||||||.||.||.||.||||||||.||.||.|||...||.||
Sbjct 1 ATGAACATGCCCCAGTCACTAGGCACCCAGCCACTGCCTCCGGAGCCACCATCCCTGGGGACTCCTATAGAAGG 74
Query 75 GCCTGGGACCA-CGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTC 147
|.||||..||| .|..|||| |.||||||||||||||||||||.||||||||||||||.||||||||.||||||
Sbjct 75 GTCTGGAGCCATAGCACCCA-CTGAGCACTGCTGGCCAGTGCGTCCGACTCTGCGCAATGAGCTGGATACCTTC 147
Query 148 TCTGTCCACTTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAG 221
||||||||||||||||||||.|||||.||.||.|||||||||||.||||||||||||||.||.||.|||.||||
Sbjct 148 TCTGTCCACTTCTACATCTTTTTTGGTCCCAGCGTGGCCCTTCCACCTGAGCGCCCAGCTGTATTTGCCCTGAG 221
Query 222 GCTGTTGCCAGTGCTGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAATGCGAGCTCCGTGCGCCAGG 295
|||||||||.|||||||||||.||.||||||||.|||||||||||||||||||||||||||||..|||||||||
Sbjct 222 GCTGTTGCCGGTGCTGGACAGCGGGGGCGTCCTTAGCCTGGAGCTCCAGCTCAATGCGAGCTCTCTGCGCCAGG 295
Query 296 AAAACGTGACGGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCC 369
||||.||.||.||.||.||||||.|||||||.||||||||||||||||||||||||||.||.||||||||||||
Sbjct 296 AAAATGTAACAGTATTCGGATGCCTGACTCATGAGGTGCCCTTGAGCCTGGGGGATGCTGCTGTGACCTGTTCC 369
Query 370 AAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCC 443
||||||||||||||.||||||||.|||||.||||||||||||.||||.||.||||||||.||||||||||||||
Sbjct 370 AAAGAGTCCCTGGCAGGCTTCCTTCTCTCGGTCAGTGCCACCTCCAGAGTGGCCAGGCTTCGAATCCCATTCCC 443
Query 444 GCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACG 517
.|||||||||||||||||||||.|||||||.||.||||||||||||||.||||||||.||||||||||||||.|
Sbjct 444 ACAGACGGGGACCTGGTTCCTGACCCTCCGTTCTCTGTGCGGGGTGGGACCTCGGTTTGTGCGGTGCCGCAATG 517
Query 518 CGACGGCCGAGGTGTGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAG 591
|.|||||.||.|||.||.||||.||||||.||||||||||.|||||.|||||.||||||||.|||||||||||.
Sbjct 518 CAACGGCAGAAGTGCGGCTGCGTACCTTCTTGTCCCCATGTGTGGATGACTGTGGGCCCTATGGCCAGTGCAAA 591
Query 592 CTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCACCGA 665
|||||||||||.|||||.||.||||||||.|||||||||||||||||.||||||.|.||||||||.|||||.||
Sbjct 592 CTGCTGCGCACCCACAACTACCTGTACGCGGCCTGCGAGTGCAAGGCTGGGTGGCGGGGCTGGGGTTGCACAGA 665
Query 666 CAGTGCAGATGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTC 739
||||||.||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||.
Sbjct 666 CAGTGCCGACGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTCCTCTGCCTGAGCAACCTCATGTTTT 739
Query 740 TGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTCTTC 813
||||||||||||||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||||||
Sbjct 740 TGCCACCTGTGGTCCTGGCCATTCGGAGCCGATACGTGCTGGAAGCTGCCGTCTACACCTTCACCATGTTCTTC 813
Query 814 TCCACGGTATGCGGTGGTGTCTGCATCTTATCACTGGGTGCTTGT----------GCATGGTGG-----TGGGT 872
|||||| |..||||| |||.||| ||||.|||| ||..|
Sbjct 814 TCCACG-------------------TTCTATCA-----TGCCTGTGACCAGCCAGGCATTGTGGTTTTCTGTAT 863
Query 873 CACAGTC-----TGTATTTCCACCACGTTCTCCGAGGGTT---TGGG------AATGTCTGTG-------CCTT 925
||..|.| ||||.||| .|||||..|| || |||| ||||||.||| ||.|
Sbjct 864 CATGGACTATGATGTACTTC-----AGTTCTGTGA---TTTCCTGGGCTCCTTAATGTCCGTGTGGGTCACCGT 929
Query 926 CA-----CTGTGTCTTCTACAGACAGAGA--CAGCAG----------------------TGCTTCCCAAACTGT 970
|| .||..||.|||.|||.|.|.|| .||||| |||| .||||
Sbjct 930 CATAGCCATGGCTCGTCTGCAGCCTGTGATCAAGCAGGTGCTGTATCTGCTCGGGGCTATGCT------GCTGT 997
Query 971 C-AT------------------GCATAGATAATG-----------------GTCATTTTTG-----------TA 997
| || ||||.||...|| ||| |.|||| |.
Sbjct 998 CTATGGCTCTGCAGCTTGACCGGCATGGACTCTGGAATCTGCTGGGACCCAGTC-TCTTTGCCCTCGGGATCTT 1070
Query 998 AGACACA--TTGGAGTAAA------------------------------------------------------- 1014
.|.|||| |||| |.|
Sbjct 1071 GGCCACAGCTTGG---ACAGTTCGCAGCGTCCGGCGCCGGCACTGTTACCCACCGACATGGCGCCGCTGGCTTT 1141
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1142 TCTACCTGTGTCCCGGCAGCCTGATTGCTGGCAGTGCCGTTCTACTGTATGCTTTCGTGGAGACTCGGGACAAC 1215
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1216 TACTTCTACATTCACAGCATTTGGCACATGCTCATTGCTGGCAGTGTGGGCTTCCTGCTGCCTCCCCGTGCCAA 1289
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1290 GACTGACCGCCGGGTCCCTTCTGGAGCCCGGGCCAGGGGCTGCGGTTACCAGCTGTGCATCAATGAACAGGAGG 1363
Query 1015 ----------------------------------------------------- 1014
Sbjct 1364 AGCTGGGACTTGTGGGCCCAGGAGGGACCACTGTCAGCAGCATCTGTGTCAGC 1416