Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08382
Subject:
XR_001747910.2
Aligned Length:
4949
Identities:
821
Gaps:
4127

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCTGACTGTGGCGGCGGCGGCCTCGAGGTGACAACTGTCTCCGTCGCAGGCTCCGGCGGGGGCGCAGGAGGTC  74

Query    1  ---------------------------------------------------ATGGCGACCACCGTCAGCACTCA  23
                                                               |||||||||||||||||||||||
Sbjct   75  GCCCGGCGCGTCACTGTCGGGTCGGCGAGCCACGGGGGCCGCCGCAGCACCATGGCGACCACCGTCAGCACTCA  148

Query   24  GCGCGGGCCGGTGTACATCGGTGAGCTCCCGCAGGACTTCCTCCGCATCACGCCCACACAGCAGCAGCGGCAGG  97
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCGCGGGCCGGTGTACATCGGTGAGCTCCCGCAGGACTTCCTCCGCATCACGCCCACACAGCAGCAGCGGCAGG  222

Query   98  TCCAGCTGGACGCCCAGGCGGCCCAGCAGCTGCAGTACGGAGGCGCAGTGGGCACCGTGGGCCGACTGAACATC  171
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCCAGCTGGACGCCCAGGCGGCCCAGCAGCTGCAGTACGGAGGCGCAGTGGGCACCGTGGGCCGACTGAACATC  296

Query  172  ACGGTGGTACAGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGGG  245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ACGGTGGTACAGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGGG  370

Query  246  CTACGCGGTGTACGAGACGCCCACGGCACACAATGGCGCCAAGAATCCCCGCTGGAATAAGGTCATCCACTGCA  319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTACGCGGTGTACGAGACGCCCACGGCACACAATGGCGCCAAGAATCCCCGCTGGAATAAGGTCATCCACTGCA  444

Query  320  CGGTGCCCCCAGGCGTGGACTCTTTCTATCTCGAGATCTTCGATG-----------------------------  364
            |||||||||||||||||||||||||||||||||||||||||||||                             
Sbjct  445  CGGTGCCCCCAGGCGTGGACTCTTTCTATCTCGAGATCTTCGATGAGGTGAGAGGGACGTGCCAGCTATTATGG  518

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct  519  AGGCTGCACGTGGCTGAGCGTGGCTGCCGTGGGGACACACCTGCCAACACAGCCACGTTCCTGGCTGGCTTCGA  592

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct  593  GGCGTGGCTCCCCACCTGGTGTTTCATTGGGTGCATGACAGGGTCCTGCTCTCCCCAAGGAATGTGAAAAAGGG  666

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct  667  ATTGTTTCCAGCTCCTTGAACATACTTACATTTGGAAACATCCCCAGTGACAAGCATGACCCAGGGATACAGCG  740

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct  741  TGCACGTGTCCCCTCCGCTGGGCGCACAGGGTCTGGCCGCTCACCAGCAGGTGGGATTTCCAGGGACAGAGCGT  814

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct  815  GCACGTGTCCCCTCCGCTGGGCACTGATCTGGCCGCTCACCAGCAGGTGGGATTTCCAGGGACAGAGCATGCAT  888

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct  889  GTGTCCCCCGCCACTGGGCACTCGTCTGGCCGCTCACCAGCAGGTGGGATTTCCAGGGACAGAGCATGCATGTG  962

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct  963  TCCGCCCCGCTGGGCGCACAGGGTCTTGCCGCACACCAGCAGGTGGGATTTCCAGGGACAGAGTGTGCACGTGT  1036

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct 1037  CCACTGGGCACTCGTCTGGCCGCTCACCAGCAGGTGGGATTTCCAGGGACAGAGCGTGCATGTGTCCGCCCCGC  1110

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct 1111  TGGGCGCACAGGGTCCGGCCGCTCACCAGCAGGTGGGATTTCCAGAGAGTGCGGCTGCCTACTGGGTGGGAAAG  1184

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct 1185  CTGTTCTTGGTGGTGCGAATGGTCGTGACCCTTGAGGGTCCTGAGTCCCGTCCGTGGCTGCACCTGCAGCGCTT  1258

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct 1259  CTGAGGCAGAGTCAGAAGGTCAGAGGGGATGTGGCGAGGCTGCTGCTCAGTGTGGTCCTGGCACCTCGCACCTG  1332

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct 1333  TGGCATTGTGAGGCTAGAGACTGGGTGGGGGCCGGGGAGCAGTGTGGGGCAGCCAGGCCAGCAGACGGCCAGCC  1406

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct 1407  CTCCCTGCCTGGGCCCTGCCTTTTCCTCCCGGCTTTTCTCTCCCCGTCCCTACCTGCTTTCCCCTCCCTGGCCC  1480

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct 1481  TCAGAAGAGTAGAGAGCGCATGGGAAGTGCAGAGTCAGCTGTGGGAGGCAGACCCCGTGTCCTTTCCAGTCTGC  1554

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct 1555  ACCCCGGCTGCTCTGGGGCTTGACAGGTGGCAGCCGGTGGAGCAAGGATGGGGCCCCGAGGGCTGGGGAGGAGC  1628

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct 1629  AGCCAGTGTCCCTGAAGTGGAACTGAAGGAGGACAGCAGCCCAGGGCCCTCGCTTTCCCCAGCCCCAGACCTGG  1702

Query  365  --------------------------------------------------------------------------  364
                                                                                      
Sbjct 1703  CCCTGGCCCTGGCCCTGGCCCATCCTGGTGGAGAGAGGGAAGAAGTCCCCTACGGAGGCTGATATACGATCGTG  1776

Query  365  --------------------------------------------AGAGAGCCTTCTCCATGGACGACCGCATTG  394
                                                        ||||||||||||||||||||||||||||||
Sbjct 1777  AAGCCTGCGCTGCCCGAGGGGTCTCATCGATGGGGTGTTGGTGCAGAGAGCCTTCTCCATGGACGACCGCATTG  1850

Query  395  CCTGGACCCACATCACCATCCCAGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGTGGTACAGCCTGAGCGGG  468
            ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CCTGGACCCACATCACCATCCCGGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGTGGTACAGCCTGAGCGGG  1924

Query  469  AGGCAGGGGGACGACAAGGAGGGCATGATCAACCTCGTCATGTCCTACGCGCTGCTTCCAGCTGCCATGGTGAT  542
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  AGGCAGGGGGACGACAAGGAGGGCATGATCAACCTCGTCATGTCCTACGCGCTGCTTCCAGCTGCCATGGTGAT  1998

Query  543  GCCACCCCAGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAGGGCGTTGGCTATGTGCCCATCACAGGGATGC  616
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  GCCACCCCAGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAGGGCGTTGGCTATGTGCCCATCACAGGGATGC  2072

Query  617  CCGCTGTCTGTAGCCCCGGCATGGTGCCCGTGGCCCTGCCCCCGGCCGCCGTGAACGCCCAGCCCCGCTGTAGC  690
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  CCGCTGTCTGTAGCCCCGGCATGGTGCCCGTGGCCCTGCCCCCGGCCGCCGTGAACGCCCAGCCCCGCTGTAGC  2146

Query  691  GAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGC  764
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  GAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGC  2220

Query  765  CCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCCA----------------  822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
Sbjct 2221  CCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCCATAGAGCCTCTGCCTCG  2294

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2295  ATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCC  2368

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2369  GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATG  2442

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2443  TGGGTTTTCGGTTCCTGGCGGTCCAGGACGGGGCGGGGGCTCCCCTCCCATCTCGTGCTGGGAGGTCTCAGCGC  2516

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2517  GCTCTCCTGTCCCTGGGACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTGCTGTAGAGAGCAGC  2590

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2591  TGCTTCTGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAAT  2664

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2665  TGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGTTTTTTTTAGAACTTCCCAGACGAA  2738

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2739  AACTCACGCCCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCTGGTGAGCTGAG  2812

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2813  CAGCTTCCTGTGGATGGTGTGGGGCCGGCCTCTGGCCTGGCTCACCTGGCCACTGTCCAGCCAGCCTTGTGACA  2886

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2887  GACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTG  2960

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2961  CCTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTG  3034

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3035  CGCTCGTGCCAGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGA  3108

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3109  GGTGATAGAGGCAGCACTGTGCATGATTCCGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGG  3182

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3183  AGCTGCTGTGCCCAGGACGTGGGTTCAGCGTGGGCGAGGAAAGCCTGGCGAGCGTGGCCCTGTAAAAGCTTTCT  3256

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3257  GAGGCGGGAGGCGCTCACTTACCTCTGACTGCCTGGGCGCTGCGTGTAGCATCTTGGCCTACAGGACAGATTTT  3330

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3331  AGGTGACACCTGGTTATGACAGTCAGAAATTTGAGAAGCTTCTCACAAGTGATGCACTTTAAATAATCTGCATG  3404

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3405  CCATTGAGACACCTGCATGTCTGGTGTTTGTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTG  3478

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3479  ATAACGGACAGAAAGAGAATGCCCACAAGTGGGTCTTCTGTGGAAGATGCAGAAGGAGGAAGTTAGTGCTTACA  3552

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3553  TTTTAGTCTTTTTCTCCCTCAAAAAAATAGGTTAAGTTTCAGTGCCAGCTAGAAAATACTGCTTTCTGCCATCG  3626

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3627  ATTGGGGGTGGTTTTTGTCAAATATACTGTTGATAAATATTTATTTTTGTAAACTTGAAGTGTGTGGTGGCCGT  3700

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3701  GGGGGAGGGACATGCTGGCAGCAGGCGCCTTCTTCAGCTGTGGGTCCTAAAGGCCTTTGATCCTTTGAAGAAGA  3774

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3775  AAGACATGGTATTTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGCCCCTGGGATTCCCTGTCTCAGATGGC  3848

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3849  CTGGTCTTACGCCTGTGTAGATTTCTTCTCCATTGGGAATGAAGGTGTCAGGCGGGACTGGAACGTTCTAGATG  3922

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3923  GTATGTTCCGTGATATTAACAACTCTAACCCAGGACAGACCACAAGCCACACTCAGAGGCCTCACTGTGCTGGG  3996

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3997  GGCTTCGGTGTCCAGGCGCCCAGGTGTGGCCACCAGCACCGGTTTCTGCCTTCGCGTTGCTGGGGTGCAGTGAG  4070

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 4071  ACTGCCACACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCTGCCAGCCCTTGA  4144

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 4145  GCAGCCCGTGTGGGGGCCCGAGGGACCCACACAGTGGGGGCCAGCCTCGCTGGAGGGAGAGCAACCCTTTGCCG  4218

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 4219  ATGACCACGCTTGCCGCCATCTCTTAGTTTTCTTTTTCACAAGCGCTTTATTTTTTTAATAGACAAATCACATT  4292

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 4293  TTGCAAGGCCTTTAATTAAATAAGATTCTTCTTTCCTTCATTTTATGCTTTATTTCCTGTTTGAAGGCTTACTG  4366

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 4367  TAGAAGTGGCTTACTGTAGAAGCAGCTTGCTGAGCCCCTCCGAGCGGTCCCCAGAATTAGCTGGTTCACAACCC  4440

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 4441  CCACCCTCCCCCGCCCCCGCCTGTGTCAGGTGTGGATGAGGTCGTCACACTCAGAAGGACAGGCTTGTCTGCCA  4514

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 4515  GCTCACAAGGGGAGGCTGCAGTGGGTTTGGGAGCTGGGTTTAGGCCCCTGGTGTCTGAGGGCCCAGGCCTTGCC  4588

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 4589  AGCCTCTGCTGCTCCTGCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGA  4662

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 4663  CAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGGCTCCGGAGATAGAAGACAGGTCGCCGGAGGCTCCCCCT  4736

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 4737  CCTCTCCTCTCCCCTCTGCAGATGCTCCCTGGGCGCTACCCTGCAGGGTGCCAGGCAGGAGTGGTCTCAGAACG  4810

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 4811  TGCGCTTCTGATTATTTTACTGGGGTCCATTGTCCAGATTTTTCTTTGATTGTAAAATATATTTTTACTTTTTA  4884

Query  823  -----------------------------------------------------------------  822
                                                                             
Sbjct 4885  GTCTTCTAATTTAATAAATGATCCATATAAAAATAGAGAAATAAAGTCCTTTAAGGGAAGGTTTA  4949

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