Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_08390
• Subject: NM_001114184.3
• Aligned Length: 1140
• Identities: 809
• Gaps: 327

Alignment

Query    1  ATGCGGTCCCGGGTTCTGTGGGGCGCTGCCCGGTGGCTCTGGCCCCGCCGGGCCGTTGGCCCAGCCCGCCGGCC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCGGTCCCGGGTTCTGTGGGGCGCTGCCCGGTGGCTCTGGCCCCGCCGGGCCGTTGGCCCAGCCCGCCGGCC  74

Query   75  CCTGAGCTCCGGTAGCCCGCCGCTGGAGGAGCTGTTCGCCCGGGGCGGGCCCTTGCGGACCTTCCTCGAGCGCC  148
            |||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct   75  CCTGAGCTCCGGTAGCCCGCCGCTGGAGGAGCTGTTCACCCGGGGCGGGCCCTTGCGGACCTTCCTCGAGCGCC  148

Query  149  AGGCGGGGTCTGAAGCCCATTTGAAGGTCAGGAGGCCCGAGTTGCTGGCGGTGATCAAACTGCTGAACGAGAAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGGCGGGGTCTGAAGCCCATTTGAAGGTCAGGAGGCCCGAGTTGCTGGCGGTGATCAAACTGCTGAACGAGAAG  222

Query  223  GAGCAGGAGCTGCGGGAGACTGAGCACTTGCTGCACGATGAGAATGAAGATTTAAGGAAACTTGCAGAGAATGA  296
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAGCGGGAGCTGCGGGAGACTGAGCACTTGCTGCACGATGAGAATGAAGATTTAAGGAAACTTGCAGAGAATGA  296

Query  297  AATCACTTTGTGTCAAAAAGAAATAACTCAGCTGAAGCATCAGATTATCTTACTTTTGGTTCCCTCAGAAGAAA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AATCACTTTGTGTCAAAAAGAAATAACTCAGCTGAAGCATCAGATTATCTTACTTTTGGTTCCCTCAGAAGAAA  370

Query  371  CAGATGAAAATGATTTGATCCTGGAAGTAACTGCAGGAGTTGGAGGTCAGGAGGCAATGTTGTTTACATCAGAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CAGATGAAAATGATTTGATCCTGGAAGTAACTGCAGGAGTTGGAGGTCAGGAGGCAATGTTGTTTACATCAGAG  444

Query  445  ATATTTGATATGTATCAGCAATATGCTGCATTTAAAAGATGGCATTTTGAAACCCTGGAATATTTTCCAAGTGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ATATTTGATATGTATCAGCAATATGCTGCATTTAAAAGATGGCATTTTGAAACCCTGGAATATTTTCCAAGTGA  518

Query  519  ACTAGGTGGCCTTAGACATGCATCTGCCAGCATTGGGGGTTCAGAAGCCTATAGGCACATGAAATTTGAAGGAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ACTAGGTGGCCTTAGACATGCATCTGCCAGCATTGGGGGTTCAGAAGCCTATAGGCACATGAAATTTGAAGGAG  592

Query  593  GTGTTCACAGAGTACAAAGAGTGCCAAAGACAGAAAAGCAAGGCCGCGTCCATACTAGCACCATGACTGTAGCA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTGTTCACAGAGTACAAAGAGTGCCAAAGACAGAAAAGCAAGGCCGCGTCCATACTAGCACCATGACTGTAGCA  666

Query  667  ATATTACCCCAGCCTACTGAGATTAATCTGGTGATTAATCCGAAAGATTTGAGAATTGACACTAAGCGAGCCAG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATATTACCCCAGCCTACTGAGATTAATCTGGTGATTAATCCGAAAGATTTGAGAATTGACACTAAGCGAGCCAG  740

Query  741  TGGAGCTGGGGGGCAGCATGTAAATACCACGGACAGTGCTGTCCGGATAGTTCATCTTCCAACAGGTGTTGTTT  814
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  .|||   
Sbjct  741  TGGAGCTGGGGGGCAGCATGTAAATACCACGGACAGTGCTGTCCGGATAGTTCATCTTCCAACAG--ATTG---  809

Query  815  CTGAATGTCAACAAGAGAGATCTCAGCTGAAAAATAAAGAGCTGGCTATGACAAAGTTACGTGCAAAACTGTAC  888
              |||.                                                                    
Sbjct  810  --GAAG--------------------------------------------------------------------  813

Query  889  AGCATGCATCTAGAAGAAGAAATAAATAAAAGACAGAATGCTAGAAAAATTCAGATTGGAAGTAAAGGAAGATC  962
                                                                                      
Sbjct  814  --------------------------------------------------------------------------  813

Query  963  AGAGAAAATAAGAACATATAATTTTCCACAGAACCGGGTCACAGATCACAGAATAAACAAGACGCTGCATGATC  1036
                                                                                      
Sbjct  814  --------------------------------------------------------------------------  813

Query 1037  TTGAAACTTTTATGCAAGGAGATTATCTACTGGATGAACTTGTACAGTCATTGAAGGAATACGCCGATTATGAA  1110
                                                                                      
Sbjct  814  --------------------------------------------------------------------------  813

Query 1111  TCTTTAGTAGAAATTATTTCCCAAAAAGTT  1140
                                          
Sbjct  814  ------------------------------  813