Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08437
- Subject:
- NM_001110100.2
- Aligned Length:
- 1652
- Identities:
- 1218
- Gaps:
- 262
Alignment
Query 1 ATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGTTGT 74
||||||||.||.||.||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1 ATGATGTCAGAGCAGGACCTGGCGGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGATCACCCAGTTGT 74
Query 75 TTTGGAGAATCATGTAGTGACAGATGAAGACGAACCTGCTTTGAAACGCCAGCGACTAGAAATCAATTGCCAGG 148
|||||||||||||||.|||||||||||.||.||||||||.|||||.||||||||||||||.|||||||||||||
Sbjct 75 TTTGGAGAATCATGTCGTGACAGATGATGATGAACCTGCCTTGAAGCGCCAGCGACTAGAGATCAATTGCCAGG 148
Query 149 ATCCATCTATAAAGTCATTCCTGTATTCCATCAACCAGACAATCTGCTTGCGGTTGGATAGCATTGAAGCCAAA 222
|.||.|||||||||||.||||||||.||.||.||||||||.||.||.||||||||||||||||||||.|||||.
Sbjct 149 ACCCCTCTATAAAGTCTTTCCTGTACTCTATTAACCAGACGATATGTTTGCGGTTGGATAGCATTGAGGCCAAG 222
Query 223 TTGCAAGCCCTGGAGGCTACTTGTAAATCCTTAGAAGAAAAGCTGGATCTGGTCACGAACAAGCAGCACAGCCC 296
.|||||||.||.|||||.|||||.|||||..|.|||||.|||||.||.||||||||.||.||.||||||||.||
Sbjct 223 CTGCAAGCTCTCGAGGCCACTTGCAAATCTCTGGAAGAGAAGCTAGACCTGGTCACCAATAAACAGCACAGTCC 296
Query 297 CATCCAGGTCCCCATGGTGGCCGGCTCCCCTCTCGGGGCAACCCAGACGTGCAACAAAGTGCGATG-------- 362
|||||||||||||||||||||.||.|||||.||.||.||.||||||||.|||||||||||||||||
Sbjct 297 CATCCAGGTCCCCATGGTGGCAGGTTCCCCACTTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGTCGTCC 370
Query 363 -------------------------------------------------------------------------- 362
Sbjct 371 CCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCATTGAGCAAC 444
Query 363 -----------------------------------CGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAA 401
||||||.|||||||||||||||||||||||.||||||||
Sbjct 445 AGGGCACCGGATTCCCTGGAAAATATCATTAGCAACGCTGTTCCTGGGCGTCGGCAGAACACCATCGTGGTGAA 518
Query 402 GGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCAGCT 475
.|||||.||.||.||.|||||||||.||||.||.|||||||||||.||.||||||||.|||||.|||||.|.||
Sbjct 519 AGTGCCTGGTCAGGACGACAGCCACAACGAAGATGGGGAGAGCGGGTCAGAGGCCAGTGACTCCGTGTCTAACT 592
Query 476 GTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAACGTCACGCTCATCACCCTGAACTCGGAAGAGGACTACCCC 549
||||.|||.|.||.||.||||.|||.||.|||||||||||.|||||||||||||||||.|||||||||||.|||
Sbjct 593 GTGGCCAGCCAGGAAGCCAGAACATTGGAAGCAACGTCACACTCATCACCCTGAACTCCGAAGAGGACTATCCC 666
Query 550 AATGGCACCTGGCTGGGCGACGAGAACAACCCCGAGATGCGGGTACGCTGCGCCATCATCCCCTCCGACATGCT 623
||||||||||||||||||||.|||||.|||||.|||||||||||||||||.|||||||||||.|||||||||.|
Sbjct 667 AATGGCACCTGGCTGGGCGATGAGAATAACCCTGAGATGCGGGTACGCTGTGCCATCATCCCTTCCGACATGTT 740
Query 624 GCACATCAGCACCAACTGCCGCACGGCTGAGAAGATGGCGCTAACGCTGCTGGACTACCTCTTCCACCGCGAGG 697
||||||||||||||||||.||||||||.||||||||||||||.||.||||||||||||||.||||||||.||||
Sbjct 741 GCACATCAGCACCAACTGTCGCACGGCCGAGAAGATGGCGCTGACACTGCTGGACTACCTGTTCCACCGTGAGG 814
Query 698 TGCAGGCTGTGTCCAACCTCTCGGGGCAGGGCAAGCACGGGAAGAAGCAGCTGGACCCGCTCACCATCTACGGC 771
|||||||||||||||||.|.||.||.||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 815 TGCAGGCTGTGTCCAACTTGTCCGGCCAGGGCAAGCACGGGAAGAAGCAGCTGGACCCCCTCACCATCTACGGC 888
Query 772 ATCCGGTGTCACCTTTTCTATAAATTTGGCATCACAGAATCCGACTGGTACCGAATCAAGCAGAGCATCGACTC 845
||||||||||||||.||||||||||||||.|||||.|||||.||||||||.||.||||||||||||||.|||||
Sbjct 889 ATCCGGTGTCACCTCTTCTATAAATTTGGAATCACGGAATCTGACTGGTATCGGATCAAGCAGAGCATTGACTC 962
Query 846 CAAGTGCCGCACGGCGTGGCGGCGCAAGCAGCGGGGCCAGAGCCTGGCGGTCAAGAGCTTCTCGCGGAGAACGC 919
|||||||||.||.||.||||||||.||||||||.|||||||||||||||||||||||||||||.|||||.||||
Sbjct 963 CAAGTGCCGGACAGCCTGGCGGCGGAAGCAGCGAGGCCAGAGCCTGGCGGTCAAGAGCTTCTCTCGGAGGACGC 1036
Query 920 CCAACTCGTCCTCCTAC--TGCCCTTCAGAGCCGATGATGAGCACCCCACCTCCTGCCAGCGAGCTCCCGCAGC 991
|...|||.|||||.||| |||| ||||||.|.||||||.|.|||||.|||||..||||.|||||.|.||||.
Sbjct 1037 CATCCTCATCCTCTTACAGTGCC--TCAGAGACCATGATGGGAACCCCTCCTCCCACCAGTGAGCTACAGCAGT 1108
Query 992 CACAGCCGCAGCCGCAGGCCCTGCACTACGCGCTGGCCAACGCACAGCAGGTGCAGATCCACCAGATCGGAGAA 1065
|| |||||.||||||||.||||||||.|||||||||||.||||||||.||||||||||||||.||.||.
Sbjct 1109 CA------CAGCCACAGGCCCTACACTACGCCCTGGCCAACGCCCAGCAGGTCCAGATCCACCAGATTGGGGAG 1176
Query 1066 GACGGACAGGTGCAAGTAATCCCACAGGGACACCTCCACATCGCCCAGGTGCCGCAGGGGGAGCAAGTCCAGAT 1139
||.||||||||||||||| ||.|||||||||||.|||||||||||.||.||||||||.||.|||||
Sbjct 1177 GATGGACAGGTGCAAGTA---------GGCCACCTCCACATTGCCCAGGTGCCTCAAGGGGAGCAGGTGCAGAT 1241
Query 1140 CACGCAGGACAGCGAGGGCAACCTCCAGATCCATCACGTGGGGCAGGA-------------------------- 1187
|||.|||||||||||||||||.||.|||||||||||.|||||.|||||
Sbjct 1242 CACACAGGACAGCGAGGGCAATCTGCAGATCCATCATGTGGGTCAGGATGGCCAGTCGTGGGGCCTGTGCCAGA 1315
Query 1188 ----------------CGGT------------------------------------------------------ 1191
||||
Sbjct 1316 ATCCCATTCCTGTCAGCGGTGACTCAGTGGCCCAGGCTAATCCCTCCCAGCTTTGGCCTCTGGGAGGAGACACA 1389
Query 1192 ------------------------------CAGGTGCTGCAGGGTGCACAGCTGATCGCCGTGGCCTCCTCGGA 1235
|||||.|||||||||||.|||||.||.|||||||||||.||.||
Sbjct 1390 CTTGATCTGCCTGCTGGAAATGAAATGATCCAGGTACTGCAGGGTGCTCAGCTCATAGCCGTGGCCTCTTCAGA 1463
Query 1236 CCCCGCGGCGGCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGC 1309
|||.||.||..|.||.||.|||||||||||.|||||||||||.|||||.|||||||||||.||.||||||||||
Sbjct 1464 CCCTGCTGCTACAGGAGTAGATGGGTCGCCTCTCCAGGGCAGTGACATTCAGGTTCAGTATGTCCAGCTGGCGC 1537
Query 1310 CAGTGAGTGACCACACGGCCGGGGCACAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGATGCAGCTC 1383
|.||||||||||||||.||||..||.|||||.||.||.||||||||||||||.||.|||||.||.||||||||.
Sbjct 1538 CTGTGAGTGACCACACAGCCGCAGCGCAGACCGCAGAGGCCCTGCAGCCCACTCTGCAGCCCGACATGCAGCTT 1611
Query 1384 GAGCACGGGGCCATCCAGATTCAG 1407
||.||.||||||||||||||.|||
Sbjct 1612 GAACATGGGGCCATCCAGATCCAG 1635