Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08437
Subject:
XM_011248444.1
Aligned Length:
1409
Identities:
1216
Gaps:
19

Alignment

Query    1  ATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGTTGT  74
            ||||||||.||.||.||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct    1  ATGATGTCAGAGCAGGACCTGGCGGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGATCACCCAGTTGT  74

Query   75  TTTGGAGAATCATGTAGTGACAGATGAAGACGAACCTGCTTTGAAACGCCAGCGACTAGAAATCAATTGCCAGG  148
            |||||||||||||||.|||||||||||.||.||||||||.|||||.||||||||||||||.|||||||||||||
Sbjct   75  TTTGGAGAATCATGTCGTGACAGATGATGATGAACCTGCCTTGAAGCGCCAGCGACTAGAGATCAATTGCCAGG  148

Query  149  ATCCATCTATAAAGTCATTCCTGTATTCCATCAACCAGACAATCTGCTTGCGGTTGGATAGCATTGAAGCCAAA  222
            |.||.|||||||||||.||||||||.||.||.||||||||.||.||.||||||||||||||||||||.|||||.
Sbjct  149  ACCCCTCTATAAAGTCTTTCCTGTACTCTATTAACCAGACGATATGTTTGCGGTTGGATAGCATTGAGGCCAAG  222

Query  223  TTGCAAGCCCTGGAGGCTACTTGTAAATCCTTAGAAGAAAAGCTGGATCTGGTCACGAACAAGCAGCACAGCCC  296
            .|||||||.||.|||||.|||||.|||||..|.|||||.|||||.||.||||||||.||.||.||||||||.||
Sbjct  223  CTGCAAGCTCTCGAGGCCACTTGCAAATCTCTGGAAGAGAAGCTAGACCTGGTCACCAATAAACAGCACAGTCC  296

Query  297  CATCCAGGTCCCCATGGTGGCCGGCTCCCCTCTCGGGGCAACCCAGACGTGCAACAAAGTGCGATGCGCTGTGC  370
            |||||||||||||||||||||.||.|||||.||.||.||.||||||||.|||||||||||||||||||||||.|
Sbjct  297  CATCCAGGTCCCCATGGTGGCAGGTTCCCCACTTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGCTGTTC  370

Query  371  CTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGC  444
            ||||||||||||||||||||||.||||||||.|||||.||.||.||.|||||||||.||||.||.|||||||||
Sbjct  371  CTGGGCGTCGGCAGAACACCATCGTGGTGAAAGTGCCTGGTCAGGACGACAGCCACAACGAAGATGGGGAGAGC  444

Query  445  GGCTCGGAGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAACGTCACGCT  518
            ||.||.||||||||.|||||.|||||.|.||||||.|||.|.||.||.||||.|||.||.|||||||||||.||
Sbjct  445  GGGTCAGAGGCCAGTGACTCCGTGTCTAACTGTGGCCAGCCAGGAAGCCAGAACATTGGAAGCAACGTCACACT  518

Query  519  CATCACCCTGAACTCGGAAGAGGACTACCCCAATGGCACCTGGCTGGGCGACGAGAACAACCCCGAGATGCGGG  592
            |||||||||||||||.|||||||||||.|||||||||||||||||||||||.|||||.|||||.||||||||||
Sbjct  519  CATCACCCTGAACTCCGAAGAGGACTATCCCAATGGCACCTGGCTGGGCGATGAGAATAACCCTGAGATGCGGG  592

Query  593  TACGCTGCGCCATCATCCCCTCCGACATGCTGCACATCAGCACCAACTGCCGCACGGCTGAGAAGATGGCGCTA  666
            |||||||.|||||||||||.|||||||||.|||||||||||||||||||.||||||||.||||||||||||||.
Sbjct  593  TACGCTGTGCCATCATCCCTTCCGACATGTTGCACATCAGCACCAACTGTCGCACGGCCGAGAAGATGGCGCTG  666

Query  667  ACGCTGCTGGACTACCTCTTCCACCGCGAGGTGCAGGCTGTGTCCAACCTCTCGGGGCAGGGCAAGCACGGGAA  740
            ||.||||||||||||||.||||||||.|||||||||||||||||||||.|.||.||.|||||||||||||||||
Sbjct  667  ACACTGCTGGACTACCTGTTCCACCGTGAGGTGCAGGCTGTGTCCAACTTGTCCGGCCAGGGCAAGCACGGGAA  740

Query  741  GAAGCAGCTGGACCCGCTCACCATCTACGGCATCCGGTGTCACCTTTTCTATAAATTTGGCATCACAGAATCCG  814
            |||||||||||||||.|||||||||||||||||||||||||||||.||||||||||||||.|||||.|||||.|
Sbjct  741  GAAGCAGCTGGACCCCCTCACCATCTACGGCATCCGGTGTCACCTCTTCTATAAATTTGGAATCACGGAATCTG  814

Query  815  ACTGGTACCGAATCAAGCAGAGCATCGACTCCAAGTGCCGCACGGCGTGGCGGCGCAAGCAGCGGGGCCAGAGC  888
            |||||||.||.||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.|||||||||
Sbjct  815  ACTGGTATCGGATCAAGCAGAGCATTGACTCCAAGTGCCGGACAGCCTGGCGGCGGAAGCAGCGAGGCCAGAGC  888

Query  889  CTGGCGGTCAAGAGCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTAC--TGCCCTTCAGAGCCGATGATGAGC  960
            ||||||||||||||||||||.|||||.|||||...|||.|||||.|||  ||||  ||||||.|.||||||.|.
Sbjct  889  CTGGCGGTCAAGAGCTTCTCTCGGAGGACGCCATCCTCATCCTCTTACAGTGCC--TCAGAGACCATGATGGGA  960

Query  961  ACCCCACCTCCTGCCAGCGAGCTCCCGCAGCCACAGCCGCAGCCGCAGGCCCTGCACTACGCGCTGGCCAACGC  1034
            |||||.|||||..||||.|||||.|.||||.||      |||||.||||||||.||||||||.|||||||||||
Sbjct  961  ACCCCTCCTCCCACCAGTGAGCTACAGCAGTCA------CAGCCACAGGCCCTACACTACGCCCTGGCCAACGC  1028

Query 1035  ACAGCAGGTGCAGATCCACCAGATCGGAGAAGACGGACAGGTGCAAGTAATCCCACAGGGACACCTCCACATCG  1108
            .||||||||.||||||||||||||.||.||.||.|||||||||||||||         ||.|||||||||||.|
Sbjct 1029  CCAGCAGGTCCAGATCCACCAGATTGGGGAGGATGGACAGGTGCAAGTA---------GGCCACCTCCACATTG  1093

Query 1109  CCCAGGTGCCGCAGGGGGAGCAAGTCCAGATCACGCAGGACAGCGAGGGCAACCTCCAGATCCATCACGTGGGG  1182
            ||||||||||.||.||||||||.||.||||||||.|||||||||||||||||.||.|||||||||||.|||||.
Sbjct 1094  CCCAGGTGCCTCAAGGGGAGCAGGTGCAGATCACACAGGACAGCGAGGGCAATCTGCAGATCCATCATGTGGGT  1167

Query 1183  CAGGACGGTCAGGTGCTGCAGGGTGCACAGCTGATCGCCGTGGCCTCCTCGGACCCCGCGGCGGCGGGCGTGGA  1256
            |||||.||.|||||.|||||||||||.|||||.||.|||||||||||.||.|||||.||.||..|.||.||.||
Sbjct 1168  CAGGATGGCCAGGTACTGCAGGGTGCTCAGCTCATAGCCGTGGCCTCTTCAGACCCTGCTGCTACAGGAGTAGA  1241

Query 1257  TGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCG  1330
            |||||||||.|||||||||||.|||||.|||||||||||.||.|||||||||||.||||||||||||||.||||
Sbjct 1242  TGGGTCGCCTCTCCAGGGCAGTGACATTCAGGTTCAGTATGTCCAGCTGGCGCCTGTGAGTGACCACACAGCCG  1315

Query 1331  GGGCACAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGATT  1404
            ..||.|||||.||.||.||||||||||||||.||.|||||.||.||||||||.||.||.||||||||||||||.
Sbjct 1316  CAGCGCAGACCGCAGAGGCCCTGCAGCCCACTCTGCAGCCCGACATGCAGCTTGAACATGGGGCCATCCAGATC  1389

Query 1405  CAG  1407
            |||
Sbjct 1390  CAG  1392

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