Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08437
- Subject:
- XM_017023382.1
- Aligned Length:
- 1478
- Identities:
- 922
- Gaps:
- 535
Alignment
Query 1 ATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGTTGT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TTTGGAGAATCATGTAGTGACAGATGAAGACGAACCTGCTTTGAAACGCCAGCGACTAGAAATCAATTGCCAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATCCATCTATAAAGTCATTCCTGTATTCCATCAACCAGACAATCTGCTTGCGGTTGGATAGCATTGAAGCCAAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTGCAAGCCCTGGAGGCTACTTGTAAATCCTTAGAAGAAAAGCTGGATCTGGTCACGAACAAGCAGCACAGCCC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CATCCAGGTCCCCATGGTGGCCGGCTCCCCTCTCGGGGCAACCCAGACGTGCAACAAAGTGCGATGCG----CT 366
||| | ||
Sbjct 1 ---------------------------------------------------------------ATG-GAATCCT 10
Query 367 GTGCCTGGGCGTCGGCAGAACAC-CATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGG 439
|| ||||..||.| ||||||
Sbjct 11 GT-----------GGCATCACCCACATTGT-------------------------------------------- 29
Query 440 AGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAACGTC 513
|||...| |.||||.| ||.|||.| ||.| |||..||..||.| |.||.
Sbjct 30 --AGCTTTT----GCCCAGTG---CTTTGTTC--CTTT--------------TCATGGCTGCGTG----ATGTG 74
Query 514 ACGCTCATCACCCTGAACTCGGAAGAGGACTACCCCAATGGCACCTGGCTGGGCGACGAGAACAACCCCGAGAT 587
.|| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCG--------------------AGAGGACTACCCCAATGGCACCTGGCTGGGCGACGAGAACAACCCCGAGAT 128
Query 588 GCGGGTACGCTGCGCCATCATCCCCTCCGACATGCTGCACATCAGCACCAACTGCCGCACGGCTGAGAAGATGG 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 129 GCGGGTACGCTGCGCCATCATCCCCTCCGACATGCTGCACATCAGCACCAACTGCCGCACGGCCGAGAAGATGG 202
Query 662 CGCTAACGCTGCTGGACTACCTCTTCCACCGCGAGGTGCAGGCTGTGTCCAACCTCTCGGGGCAGGGCAAGCAC 735
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 203 CGCTCACGCTGCTGGACTACCTCTTCCACCGCGAGGTGCAGGCTGTGTCCAACCTCTCGGGGCAGGGCAAGCAC 276
Query 736 GGGAAGAAGCAGCTGGACCCGCTCACCATCTACGGCATCCGGTGTCACCTTTTCTATAAATTTGGCATCACAGA 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 277 GGGAAGAAGCAGCTGGACCCGCTCACCATCTACGGCATCCGGTGTCACCTTTTCTATAAATTTGGCATCACAGA 350
Query 810 ATCCGACTGGTACCGAATCAAGCAGAGCATCGACTCCAAGTGCCGCACGGCGTGGCGGCGCAAGCAGCGGGGCC 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 351 ATCCGACTGGTACCGAATCAAGCAGAGCATCGACTCCAAGTGCCGCACGGCGTGGCGGCGCAAGCAGCGGGGCC 424
Query 884 AGAGCCTGGCGGTCAAGAGCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTACTGCCCTTCAGAGCCGATGATG 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 425 AGAGCCTGGCGGTCAAGAGCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTACTGCCCTTCAGAGCCGATGATG 498
Query 958 AGCACCCCACCTCCTGCCAGCGAGCTCCCGCAGCCACAGCCGCAGCCGCAGGCCCTGCACTACGCGCTGGCCAA 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 499 AGCACCCCACCTCCTGCCAGCGAGCTCCCGCAGCCACAGCCGCAGCCGCAGGCCCTGCACTACGCGCTGGCCAA 572
Query 1032 CGCACAGCAGGTGCAGATCCACCAGATCGGAGAAGACGGACAGGTGCAAGTAATCCCACAGGGACACCTCCACA 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 573 CGCACAGCAGGTGCAGATCCACCAGATCGGAGAAGACGGACAGGTGCAAGTAATCCCACAGGGACACCTCCACA 646
Query 1106 TCGCCCAGGTGCCGCAGGGGGAGCAAGTCCAGATCACGCAGGACAGCGAGGGCAACCTCCAGATCCATCACGTG 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 647 TCGCCCAGGTGCCGCAGGGGGAGCAAGTCCAGATCACGCAGGACAGCGAGGGCAACCTCCAGATCCATCACGTG 720
Query 1180 GGGCAGGACGGT-------------------------------------------------------------- 1191
||||||||||||
Sbjct 721 GGGCAGGACGGTCAGCTTCTAGAGGCCACCCGCATCCCCTGCCTCCTGGCCCCATCCGTCTTCAAAGCCAGCAG 794
Query 1192 ----CAGGTGCTGCAGGGTGCACAGCTGATCGCCGTGGCCTCCTCGGACCCCGCGGCGGCGGGCGTGGATGGGT 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 795 TGGCCAGGTGCTGCAGGGTGCACAGCTGATCGCCGTGGCCTCCTCGGACCCCGCGGCGGCGGGCGTGGATGGGT 868
Query 1262 CGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCGGGGCA 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 869 CGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCGGGGCA 942
Query 1336 CAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGATTCAG 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 943 CAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGATTCAG 1014