Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_08447
• Subject: NR_146222.2
• Aligned Length: 3058
• Identities: 1834
• Gaps: 1223

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGGAGTCCGGGTCGGCTTGGCTGAGCGGGGGCGGTGCTGGGCAGGGCGGCGGCCGCTCCCTCCCGGACTCCCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTCCCGGCCTCCCTGGTCCCGCCTGGGAAGGGATGCAAGGAAGCCCTCCGGCGCTGCGCTCCGAGGCGGGAGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGCGTCCCCCTCCGCCCCTCGGGTCCTGGCGCCTCAGAGCCCGGCCCAGGCCGCGGAACGGTGATGCTCGGGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGGACGGGCGGGCGCGGATCCCTGCGTCCCGCTGAAAATGTGTGTCTGACATGCAAGCTCAGTGGGGCAGAGAC  296

Query    1  -------------------------------------ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGT  37
                                                 |||||||||||||||||||||||||||||||||||||
Sbjct  297  CCGTGGATTGCTGTGCCCTGCCCTCCGGACCTGGATCATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGT  370

Query   38  TTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCACGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGC  111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCACGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGC  444

Query  112  GGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCG  185
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCG  518

Query  186  CCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATG  259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATG  592

Query  260  AAGAGAAACTGTTTCAGGTGCACACGTTTGAAATTTTCCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTC  333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAGAGAAACTGTTTCAGGTGCACACGTTTGAAATTTTCCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTC  666

Query  334  CAAGCTGTCTACGGACTGCAGAGAGCCCTGCAGGGGGATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCG  407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAAGCTGTCTACGGACTGCAGAGAGCCCTGCAGGGGGATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCG  740

Query  408  GCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAGGAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAA  481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAGGAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAA  814

Query  482  AACATCAAGTTGAAGCCCTTAAAAATATGCAACATCAAAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAA  555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AACATCAAGTTGAAGCCCTTAAAAATATGCAACATCAAAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAA  888

Query  556  GATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGATAGAGGAACATGCTTTTGACGACAATAAATCAGTCAA  629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGATAGAGGAACATGCTTTTGACGACAATAAATCAGTCAA  962

Query  630  GGGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAGGAAGAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAG  703
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAGGAAGAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAG  1036

Query  704  AAGTGGAGGATGACTTGGGTCTTAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGA  777
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AAGTGGAGGATGACTTGGGTCTTAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGA  1110

Query  778  GATTCAACCATCCCACGTGCAGATCACCACTTTATAAAGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTG  851
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GATTCAACCATCCCACGTGCAGATCACCACTTTATAAAGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTG  1184

Query  852  TGGCTGGCTATGTACAGCCATAGGATTGCCTACAATGTTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTT  925
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGGCTGGCTATGTACAGCCATAGGATTGCCTACAATGTTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTT  1258

Query  926  CAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGAGACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTT  999
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGAGACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTT  1332

Query 1000  CTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAAAGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACAT  1073
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAAAGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACAT  1406

Query 1074  GACACTGTTAATGATTGCATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCA  1147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GACACTGTTAATGATTGCATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCA  1480

Query 1148  TTTCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAA  1221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TTTCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAA  1554

Query 1222  GAAGGCGACATTGACTACAGCACCGTGCTCCTCGGCATGCTGGTGACGCAGGACGTGCAGCTCGGGCTCTTCAT  1295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GAAGGCGACATTGACTACAGCACCGTGCTCCTCGGCATGCTGGTGACGCAGGACGTGCAGCTCGGGCTCTTCAT  1628

Query 1296  GGCCGTCATGCGGACTCTCATACAGGCGGGCGCCAGTGCATCTTCTAGCATTGTCGTGGAAGTTCTCCGAATCC  1369
            |||||||||||.|||||||||||||||||||||||||||||||||||                           
Sbjct 1629  GGCCGTCATGCCGACTCTCATACAGGCGGGCGCCAGTGCATCTTCTA---------------------------  1675

Query 1370  TGGTTTTGATTGGTCAGATTCTTTTTTCACTAGCGGCGGTTTTTCTTTTATGTCTTGTTATAAAGAAGTATCTC  1443
                                                                                      
Sbjct 1676  --------------------------------------------------------------------------  1675

Query 1444  ATTGGACCCTATTATCGGAAGCTGCACATGGAAAGCAAGGGGAACAAAGAAATCCTGATCTTGGGAATATCTGC  1517
                                                                                      
Sbjct 1676  --------------------------------------------------------------------------  1675

Query 1518  CTTTATCTTCTTAATGTTAACGGTCACGGAGCTGCTGGACGTCTCCATGGAGCTGGGCTGTTTCCTGGCTGGAG  1591
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1676  ---------------------GGTCACGGAGCTGCTGGACGTCTCCATGGAGCTGGGCTGTTTCCTGGCTGGAG  1728

Query 1592  CGCTCGTCTCCTCTCAGGGCCCCGTGGTCACCGAGGAGATCGCCACCTCCATCGAACCCATCCGCGACTTCCTG  1665
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1729  CGCTCGTCTCCTCTCAGGGCCCCGTGGTCACCGAGGAGATCGCCACCTCCATCGAACCCATCCGCGACTTCCTG  1802

Query 1666  GCCATCGTTTTCTTCGCCTCCATAGGGCTCCACGTGTTCCCCACGTTTGTGGCGTACGAGCTCACGGTGCTGGT  1739
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1803  GCCATCGTTTTCTTCGCCTCCATAGGGCTCCACGTGTTCCCCACGTTTGTGGCGTACGAGCTCACGGTGCTGGT  1876

Query 1740  GTTCCTCACCTTGTCAGTGGTGGTGATGAAGTTTCTCCTGGCGGCGCTGGTCCTGTCTCTCATTCTGCCGAGGA  1813
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1877  GTTCCTCACCTTGTCAGTGGTGGTGATGAAGTTTCTCCTGGCGGCGCTGGTCCTGTCTCTCATTCTGCCGAGGA  1950

Query 1814  GCAGCCAGTACATCAAGTGGATCGTCTCTGCGGGGCTTGCCCAGGTCAGCGAGTTTTCCTTTGTCCTGGGGAGC  1887
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1951  GCAGCCAGTACATCAAGTGGATCGTCTCTGCGGGGCTTGCCCAGGTCAGCGAGTTTTCCTTTGTCCTGGGGAGC  2024

Query 1888  CGGGCGCGAAGAGCGGGCGTCATCTCTCGGGAGGTGTACCTCCTTATACTGAGTGTGACCACGCTCAGCCTCTT  1961
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2025  CGGGCGCGAAGAGCGGGCGTCATCTCTCGGGAGGTGTACCTCCTTATACTGAGTGTGACCACGCTCAGCCTCTT  2098

Query 1962  GCTCGCCCCGGTGCTGTGGAGAGCTGCAATCACGAGGTGTGTGCCCAGACCGGAGAGACGGTCCAGCCTC----  2031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct 2099  GCTCGCCCCGGTGCTGTGGAGAGCTGCAATCACGAGGTGTGTGCCCAGACCGGAGAGACGGTCCAGCCTCTGAT  2172

Query 2032  --------------------------------------------------------------------------  2031
                                                                                      
Sbjct 2173  GGCTCGGAGATGATGGACCGTGGAAGGGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCT  2246

Query 2032  --------------------------------------------------------------------------  2031
                                                                                      
Sbjct 2247  TCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGCAGAGCGTCAGTGCAGTCGTGTTATCCCGGCTTT  2320

Query 2032  --------------------------------------------------------------------------  2031
                                                                                      
Sbjct 2321  TACAGAATATTCTTGTCCTATTTTAGAATTTTCCGGAGTAGTTTATTTGCAGTCTGTTGATTATGTGCAGTAGA  2394

Query 2032  --------------------------------------------------------------------------  2031
                                                                                      
Sbjct 2395  CCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGCCTTTTTTTTTTTTCCCTGAAATT  2468

Query 2032  --------------------------------------------------------------------------  2031
                                                                                      
Sbjct 2469  ATTATTAATTTTCTATTGTGAGTTCATCAGTTCATAGTTTTTTTAGTAAAGAAGCAAAATTAAAAGGCTTTTAA  2542

Query 2032  --------------------------------------------------------------------------  2031
                                                                                      
Sbjct 2543  AAATGTACAACTTCAGAATTATAATCTGTTAGTCAAATATTTGTTATTAAACATTTCTGTAATATGAAGTTGTA  2616

Query 2032  --------------------------------------------------------------------------  2031
                                                                                      
Sbjct 2617  ATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCTTAAAGCCTATGTTTTCTAAAATGAGACAAATACGGAT  2690

Query 2032  --------------------------------------------------------------------------  2031
                                                                                      
Sbjct 2691  GTCTATTTGCCTTTTATTGTAACTTTTAAATGAAATAATTTCATGTCAATTTCTATTAGATATATCACTTAAAA  2764

Query 2032  --------------------------------------------------------------------------  2031
                                                                                      
Sbjct 2765  TATTTGGTTTTAAATCACAAGAATATGTATTCTTTAATAAAGATAATTTATGATCATGGTATAATTAATTGAAA  2838

Query 2032  ------------------------  2031
                                    
Sbjct 2839  TTTATTAAAATCTGTTTTTATTAA  2862