Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_08447
• Subject: XM_011537506.2
• Aligned Length: 2032
• Identities: 1246
• Gaps: 785

Alignment

Query    1  ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCA  74

Query   75  CGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGG  148

Query  149  TCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCA  222

Query  223  ATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGAAATTTT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGAAATTTT  296

Query  297  CCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGAGAGCCCTGCAGGGGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGAGAGCCCTGCAGGGGG  370

Query  371  ATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAG  444

Query  445  GAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAACATCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAACATCA  518

Query  519  AAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGA  592

Query  593  TAGAGGAACATGCTTTTGACGACAATAAATCAGTCAAGGGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAGGAA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TAGAGGAACATGCTTTTGACGACAATAAATCAGTCAAGGGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAGGAA  666

Query  667  GAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAGAAGTGGAGGATGACTTGGGTCTTAGCATGCTGATTGA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAGAAGTGGAGGATGACTTGGGTCTTAGCATGCTGATTGA  740

Query  741  CTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTTATAA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTTATAA  814

Query  815  AGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATAGGATTGCCTACAATG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATAGGATTGCCTACAATG  888

Query  889  TTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGA  962

Query  963  GACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTTCTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTTCTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAA  1036

Query 1037  AGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTGTTAATGATTGCATTTGGCTTGCTGTGGGGG  1110
                                                                                      
Sbjct 1037  --------------------------------------------------------------------------  1036

Query 1111  CATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGT  1184
                                                                                      
Sbjct 1037  --------------------------------------------------------------------------  1036

Query 1185  GTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCGACATTGACTACAGCACCGTGCTCCTCGGCA  1258
                                                                                      
Sbjct 1037  --------------------------------------------------------------------------  1036

Query 1259  TGCTGGTGACGCAGGACGTGCAGCTCGGGCTCTTCATGGCCGTCATGCGGACTCTCATACAGGCGGGCGCCAGT  1332
                                                                                      
Sbjct 1037  --------------------------------------------------------------------------  1036

Query 1333  GCATCTTCTAGCATTGTCGTGGAAGTTCTCCGAATCCTGGTTTTGATTGGTCAGATTCTTTTTTCACTAGCGGC  1406
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ---------AGCATTGTCGTGGAAGTTCTCCGAATCCTGGTTTTGATTGGTCAGATTCTTTTTTCACTAGCGGC  1101

Query 1407  GGTTTTTCTTTTATGTCTTGTTATAAAGAAGTATCTCATTGGACCCTATTATCGGAAGCTGCACATGGAAAGCA  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102  GGTTTTTCTTTTATGTCTTGTTATAAAGAAGTATCTCATTGGACCCTATTATCGGAAGCTGCACATGGAAAGCA  1175

Query 1481  AGGGGAACAAAGAAATCCTGATCTTGGGAATATCTGCCTTTATCTTCTTAATGTTAACG-GTCACGGAGCTGCT  1553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||            
Sbjct 1176  AGGGGAACAAAGAAATCCTGATCTTGGGAATATCTGCCTTTATCTTCTTAATGTTAACGAGT------------  1237

Query 1554  GGACGTCTCCATGGAGCTGGGCTGTTTCCTGGCTGGAGCGCTCGTCTCCTCTCAGGGCCCCGTGGTCACCGAGG  1627
                      ||            |||                 ||||.|                        
Sbjct 1238  ----------AT------------TTT-----------------TCTCTT------------------------  1248

Query 1628  AGATCGCCACCTCCATCGAACCCATCCGCGACTTCCTGGCCATCGTTTTCTTCGCCTCCATAGGGCTCCACGTG  1701
                                                                                      
Sbjct 1249  --------------------------------------------------------------------------  1248

Query 1702  TTCCCCACGTTTGTGGCGTACGAGCTCACGGTGCTGGTGTTCCTCACCTTGTCAGTGGTGGTGATGAAGTTTCT  1775
                                                                                      
Sbjct 1249  --------------------------------------------------------------------------  1248

Query 1776  CCTGGCGGCGCTGGTCCTGTCTCTCATTCTGCCGAGGAGCAGCCAGTACATCAAGTGGATCGTCTCTGCGGGGC  1849
                                                                                      
Sbjct 1249  --------------------------------------------------------------------------  1248

Query 1850  TTGCCCAGGTCAGCGAGTTTTCCTTTGTCCTGGGGAGCCGGGCGCGAAGAGCGGGCGTCATCTCTCGGGAGGTG  1923
                                                                                      
Sbjct 1249  --------------------------------------------------------------------------  1248

Query 1924  TACCTCCTTATACTGAGTGTGACCACGCTCAGCCTCTTGCTCGCCCCGGTGCTGTGGAGAGCTGCAATCACGAG  1997
                                                                                      
Sbjct 1249  --------------------------------------------------------------------------  1248

Query 1998  GTGTGTGCCCAGACCGGAGAGACGGTCCAGCCTC  2031
                                              
Sbjct 1249  ----------------------------------  1248