Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_08447
• Subject: XM_024449370.1
• Aligned Length: 2033
• Identities: 1173
• Gaps: 856

Alignment

Query    1  ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCA  74

Query   75  CGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGG  148

Query  149  TCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCA  222

Query  223  ATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGAAATTTT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGAAATTTT  296

Query  297  CCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGAGAGCCCTGCAGGGGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGAGAGCCCTGCAGGGGG  370

Query  371  ATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAG  444

Query  445  GAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAACATCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAACATCA  518

Query  519  AAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGA  592

Query  593  TAGAGGAACATGCTTTTGACGACAATAAATCAGTCAAGGGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAGGAA  666
            ||||||||||||||||||||||||||||||||                                          
Sbjct  593  TAGAGGAACATGCTTTTGACGACAATAAATCA------------------------------------------  624

Query  667  GAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAGAAGTGGAGGATGACTTGGGTCTTAGCATGCTGATTGA  740
                                                                                      
Sbjct  625  --------------------------------------------------------------------------  624

Query  741  CTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTTATAA  814
                                                                                      
Sbjct  625  --------------------------------------------------------------------------  624

Query  815  AGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATAGGATTGCCTACAATG  888
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  625  --GACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATAGGATTGCCTACAATG  696

Query  889  TTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  697  TTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGA  770

Query  963  GACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTTCTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  771  GACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTTCTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAA  844

Query 1037  AGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTGTTAATGATTGCATTTGGCTTGCTGTGGGGG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  845  AGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTGTTAATGATTGCATTTGGCTTGCTGTGGGGG  918

Query 1111  CATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  919  CATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGT  992

Query 1185  GTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCGACATTGACTACAGCACCGTGCTCCTCGGCA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  993  GTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCGACATTGACTACAGCACCGTGCTCCTCGGCA  1066

Query 1259  TGCTGGTGACGCAGGACGTGCAGCTCGGGCTCTTCATGGCCGTCATGCGGACTCTCATACAGGCGGGCGCCAGT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1067  TGCTGGTGACGCAGGACGTGCAGCTCGGGCTCTTCATGGCCGTCATGCCGACTCTCATACAGGCGGGCGCCAGT  1140

Query 1333  GCATCTTCTAG-CATTG-TCGTGGAAGTTCTCCGAATCCTGGTTTTGATTGGTCAGATTCTTTTTTCACTAGCG  1404
            ||||||||||| .|.|| |.||||       ||         ||||||                      ||| 
Sbjct 1141  GCATCTTCTAGAGAGTGTTTGTGG-------CC---------TTTTGA----------------------AGC-  1175

Query 1405  GCGGTTTTTCTTTTATGTCTTGTTATAAAGAAGTATCTCATTGGACCCTATTATCGGAAGCTGCACATGGAAAG  1478
               ||||                                                                   
Sbjct 1176  ---GTTT-------------------------------------------------------------------  1179

Query 1479  CAAGGGGAACAAAGAAATCCTGATCTTGGGAATATCTGCCTTTATCTTCTTAATGTTAACGGTCACGGAGCTGC  1552
                                                                                      
Sbjct 1180  --------------------------------------------------------------------------  1179

Query 1553  TGGACGTCTCCATGGAGCTGGGCTGTTTCCTGGCTGGAGCGCTCGTCTCCTCTCAGGGCCCCGTGGTCACCGAG  1626
                                                                                      
Sbjct 1180  --------------------------------------------------------------------------  1179

Query 1627  GAGATCGCCACCTCCATCGAACCCATCCGCGACTTCCTGGCCATCGTTTTCTTCGCCTCCATAGGGCTCCACGT  1700
                                                                                      
Sbjct 1180  --------------------------------------------------------------------------  1179

Query 1701  GTTCCCCACGTTTGTGGCGTACGAGCTCACGGTGCTGGTGTTCCTCACCTTGTCAGTGGTGGTGATGAAGTTTC  1774
                                                                                      
Sbjct 1180  --------------------------------------------------------------------------  1179

Query 1775  TCCTGGCGGCGCTGGTCCTGTCTCTCATTCTGCCGAGGAGCAGCCAGTACATCAAGTGGATCGTCTCTGCGGGG  1848
                                                                                      
Sbjct 1180  --------------------------------------------------------------------------  1179

Query 1849  CTTGCCCAGGTCAGCGAGTTTTCCTTTGTCCTGGGGAGCCGGGCGCGAAGAGCGGGCGTCATCTCTCGGGAGGT  1922
                                                                                      
Sbjct 1180  --------------------------------------------------------------------------  1179

Query 1923  GTACCTCCTTATACTGAGTGTGACCACGCTCAGCCTCTTGCTCGCCCCGGTGCTGTGGAGAGCTGCAATCACGA  1996
                                                                                      
Sbjct 1180  --------------------------------------------------------------------------  1179

Query 1997  GGTGTGTGCCCAGACCGGAGAGACGGTCCAGCCTC  2031
                                               
Sbjct 1180  -----------------------------------  1179