Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08496
- Subject:
- NR_156432.2
- Aligned Length:
- 3628
- Identities:
- 520
- Gaps:
- 3108
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTCCGGGGGCCAGGCGGCCGCCGCGAGTCTGGTATCCTGAGCTTCGTGAGTTGAGCGCTGCTGCTCCGCGGT 74
Query 1 --------------------------ATGGTGTTCTACTTCACCAGCAGCAGCGTTAATTCATCTGCCTACACT 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGAGTCACCGCACCGCTCCCGGGATCATGGTGTTCTACTTCACCAGCAGCAGCGTTAATTCATCTGCCTACACT 148
Query 49 ATTTACATGGGAAAAGATAAATATGAAAATGAAGATCTGATCAAGCATGGCTGGCCTGAAGATATCTGGTTTCA 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATTTACATGGGAAAAGATAAATATGAAAATGAAGATCTGATCAAGCATGGCTGGCCTGAAGATATCTGGTTTCA 222
Query 123 TGTGGACAAACTCTCTTCGGCTCATGTATACCTTCGATTACATAAGGGAGAGAATATAGAAGACATCCCAAAGG 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGTGGACAAACTCTCTTCGGCTCATGTATACCTTCGATTACATAAGGGAGAGAATATAGAAGACATCCCAAAGG 296
Query 197 AAGTGCTGATGGACTGTGCCCACCTTGTGAAGGCCAATAGCATTCAAGGCTGCAAGATGAACAACGTTAATGTG 270
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAGTGCTGATGGACTGTGCCCACCTTGTGAAGGCCAATAGCATTCAAG-------------------------- 344
Query 271 GTATATACGCCGTGGTCTAACCTGAAGAAAACAGCTGACATGGATGTGGGGCAGATAGGCTTTCACAGGCAGAA 344
Sbjct 345 -------------------------------------------------------------------------- 344
Query 345 GGATGTAAAAATTGTGACAGTGGAGAAGAAAGTAAATGAGATCCTGAACCGATTAGAAAAGACCAAAGTCGAGC 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 345 ----GTAAAAATTGTGACAGTGGAGAAGAAAGTAAATGAGATCCTGAACCGATTAGAAAAGACCAAAGTCGAGC 414
Query 419 GGTTCCCAGACCTAGCAGCAGAGAAAGAATGCAGAGATCGTGAAGAGAGGAATGAGAAAAAAGCCCAAATTCAG 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 GGTTCCCAGACCTAGCAGCAGAGAAAGAATGCAGAGATCGTGAAGAGAGGAATGAGAAAAAAGCCCAAATTCAG 488
Query 493 GAAATGAAAAAGAGAGAAAAAGAAGAAATGAAGAAGAAGAGGGAAATGGATGAACTTAGGAGCTATTCATCACT 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 489 GAAATGAAAAAGAGAGAAAAAGAAGAAATGAAGAAGAAGAGGGAAATGGATGAACTTAGGAGCTATTCATCACT 562
Query 567 AATGAAAGTTGAAAATATGTCTTCAAATCAGGATGGCAATGATTCAGATGAATTCAATG--------------- 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 563 AATGAAAGTTGAAAATATGTCTTCAAATCAGGATGGCAATGATTCAGATGAATTC-ATGTAAAAGGAGAAAAGG 635
Query 626 -------------------------------------------------------------------------- 625
Sbjct 636 AGAAAAGGACCTTTGAAAGATGTGAATGTAGAGACAATTGCAGACCTTTTGGTTTCATCTGTGTTCTGAAATAT 709
Query 626 -------------------------------------------------------------------------- 625
Sbjct 710 AAAATACAACCAAAATTCTACCTTCATCCTACCCAGAAATTATTGATTTTCAAGTTTTAAAAAAATTGTACCTT 783
Query 626 -------------------------------------------------------------------------- 625
Sbjct 784 TTTTGCTGACAGAAAAGGATCAGATATGTATAAAATAGTTGAACTTGACAGCATATAACTTAAAGTGAAAATGT 857
Query 626 -------------------------------------------------------------------------- 625
Sbjct 858 TTTTGCCAGAACATGTCTTGGTACCTTGTGAAAGCAGGCTGCCCTTGTTCTTGAGATAGACTTTAAAATGAACC 931
Query 626 -------------------------------------------------------------------------- 625
Sbjct 932 AGCTCTGAAAAGTACTTCTGCTGCTCTGGTCTATCCCTGAAAACAGATGTCTTGAAACACTTTTCATATTCTTA 1005
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1006 AAATAATCTTCACTTCTGTTAAGAAGAACATGTTGGTGGGTAATTATGCGAATGTTTCCCTGTCCCTGATTTCT 1079
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1080 CGATTAGGCGTATGGGTTTTGAAAAAGAGATTTTTCAGAAGATTGTCAGCTTCAGTATTCATGTTCCATCGTGT 1153
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1154 CATCTGGGTCTGTTAGTGTAGTGACCCTCAGTGCAGTCTGTCCCAGCGTTTACGTCCTTGCTTCCTCTGAGCAG 1227
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1228 AGGCCTCCATCTTAGTATCAACATATTTAAAGAAATTGATGGTGTTCATCAAGCTGGGGCCTGTGGCAGTTGTT 1301
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1302 GCCTGAGCACCAAGTAACCCAAGCCACCTATGTGACAACTTCTGGGCCCAGGAGTAATTTCTCAGCATTGAGGG 1375
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1376 TAAAATAGGATGGAGTGCTCTGTTGATCATTTGGGAGATGTAGGTTACCTGATTTGTGCCTTAGGATGCAGCGT 1449
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1450 GAAGCAGAAGTCCATATTGCAATTATGATTTTAGAAGGAACTAAGCATTTTACTCACACCCACAGCAGCAAGAA 1523
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1524 TGACCTCCTGCAGCAGATATTCCACCTGTAATAGCACTTTGGAACTGTGGGCAAAACCAAAAGGCTAGTGTTTC 1597
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1598 CATTTATTCCATGTTGGTGTATGGGGTTGAACTGGAAAATTCCCTGAGGCAAAACTCACTGGCCAAATTTTGAG 1671
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1672 AGGGTATAGAAAATGACTTTAGAGATGAGTGGTTTTGTGTATGTGTCTGATGATATTCAGTCTGATGTTCCGCA 1745
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1746 ATTTTAAAAGTTATAATAAAATACCATTTTTTTAATCTGGAAGGACATTGATATATGAATTCTTAGAATTTGCT 1819
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1820 ATTAAAAAGGGTAGCCCCCATTCCACAAGCTGGTTTTGAGGGTGATCTTGCTCTAAAAAACCTCATTCATCATA 1893
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1894 GGCTCAGTCTGACAGGTTCTGTACGGGGCTATCATCTTTCTCCTCCTCTGCTAAATGCCTCTTTCTTCCAGCTG 1967
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1968 CTCACTGGGTCAAAGGGATGTCCTTTCTCAGATGTATTCTTGATACATCTCAGATGTATTCGTAGCTGTGCTCC 2041
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2042 TTCCATACTTCCAAGGAGTCCGGCTTCTACAGAATTCCTCTGTACCTCACACTGCAACACATGTAGATAGCGCT 2115
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2116 TTTGAAAAATACATATATTTTTACTATAGTATGAGAGGTCCTGGGGCTCAAACTTTAAACATTTCCTAACTCAG 2189
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2190 CTTACACTGGTTTAAAATGTCCAGGTCTCTGCTGAATTCTCTTGTTGAATTCATAGCTCTGTGTTGATTCCTAT 2263
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2264 GCCCCTAACCCTGCAGCCTCTTTGTTTTATTTTTTTCCCCATCTCTGTTGGTCCCAGGGAAAGCAAGGAAATTT 2337
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2338 TCTTTTGAGGACTTATAGGTTGATTGCCCACAGGTCAAACTGTTGGCATTGAACTCCTCTCATTTCTTGCCATT 2411
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2412 GGATTGTTTCCTAAACGTTGGATAGGAGAATTCGAAATTGTTGCTATTTTTATGAGCTGTGCCCTTGATCAAAT 2485
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2486 CTGTGCTGTGGGTCTGAGTCACTTTGCCAATGTCGTCTTCAGTTTCAACACTCTGATCAGCATGCAGGCGAGGG 2559
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2560 GCATGTTTAATTTACTTCACTAACTGCTATATTCTATAGCTTTAGACTTCATATTTCTTATCCACCTTTGTCTA 2633
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2634 GGCTCACGATCTTTGGGCAAGGGAGCTTTGTCACCGTGGTTGGGCTAGAACAAATATTGAGAAGTTTACCAACA 2707
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2708 CAGATGTTGAGAAGTTTATTGAAAGGCACTGACATTAGCAGAATAAGTGATGGACATTAGTTGAACCCCTTCAG 2781
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2782 TGTCTATGTGTTTTATTGTATTGTCTTTAACTCGTTCTTGAAGCACAGATTTCAGCGAGCCTTTCAGCTATTCA 2855
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2856 GTGCCAGCGGTTTTCCCCACTCAGGAAAGATGGTGTGAGCCATACACACAGCAGGATTAGACGGGGAGAGTTTC 2929
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2930 AGCTGCAGCTTCTAGTTTAAGACCAAAGCCCTTCCTCCCGCTGCTGCATCTGTCTGAGAGGGGAAGCTCTTGTT 3003
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3004 TTCCAAGCTGGAACCGTTTATGAGGAAAACTGAGCAGGGTGGCAAAATGGAAAAGGAACAATTTTCTAGTTTTT 3077
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3078 CCTACGCGTGATATTGACGCGTGCTTTTTCTTTGATTTGAGGTACAGCATGTAAATAACAAATTTCCATATTCA 3151
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3152 AAATGATCATATTAGAGTGACTGAGTGACCTTTTGATTTTGAAGCAGACTAAAATCTGACCAGACCACAATGAA 3225
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3226 AAGTATAAAATTAGAAACTTAAATTCCAAGCTAAATTTCAGCTTTGACCCACCTAACTCCAGTGAATAGGTGGC 3299
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3300 AGCTCAGAAACAAGGACAGCACTGCTGCTGCCAGAGCAAGCTCACATCCAGCTGGCACTTCGTGAGAGCTCCTT 3373
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3374 CCTGCCGGGCACGTGTGAGTTCAGCGTGGGCAAGAGACTTTTATGCACATTCTGTCATTCAAAAGGGAAATGAT 3447
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3448 GCCAACCCCAGATGCAGCATGTCCTGAATGAATGATCTGTAAAATACAATAATAAAAGCTTATAGTTTGAGTAG 3521
Query 626 -- 625
Sbjct 3522 AA 3523
