Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08646
- Subject:
- NR_110734.1
- Aligned Length:
- 3543
- Identities:
- 1164
- Gaps:
- 2375
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCATTCCAGTTTGGCAACTTCACTTGTAGGGCTGTTTTAATCAAGCTGCCCAAAGTCCCCCAATCACTCCTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AATACACAGAGAGAGGCAGCAGCTTGCTCAGCGGACAAGGATGCTGGGCGTGAGGGACCAAGGCCTGCCCTGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCGGGCCTCCTCCAGCCAGTGCTGACCAGGGACTTCTGACCTGCTGGCCAGCCAGGACCTGTGTGGGGAGGCC 222
Query 1 ---------------------------------ATGTTACA------------------------------GGA 11
|.|.|||| |||
Sbjct 223 CTCCTGCTGCCTTGGGGTGACAATCTCAGCTCCAGGCTACAGGGAGACCGGGAGGATCACAGAGCCAGCATGGA 296
Query 12 TCCTGAGAGTGATCAACCTCTGAACAGCCTCGATGTCAAACCCCTGCGCAAACCCCGTATCCCCATGGAGACCT 85
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCCTGACAGTGATCAACCTCTGAACAGCCTCGATGTCAAACCCCTGCGCAAACCCCGTATCCCCATGGAGACCT 370
Query 86 TCAGAAAGGTGGGGATCCCCATCATCATAGCACTACTGAGCCTGGCGAGTATCATCATTGTGGTTGTCCTCATC 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCAGAAAGGTGGGGATCCCCATCATCATAGCACTACTGAGCCTGGCGAGTATCATCATTGTGGTTGTCCTCATC 444
Query 160 AAGGTGATTCTGGATAAATACTACTTCCTCTGCGGGCAGCCTCTCCACTTCATCCCGAGGAAGCAGCTGTGTGA 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGGTGATTCTGGATAAATACTACTTCCTCTGCGGGCAGCCTCTCCACTTCATCCCGAGGAAGCAGCTGTGTGA 518
Query 234 CGGAGAGCTGGACTGTCCCTTGGGGGAGGACGAGGAGCACTGTGTCAAGAGCTTCCCCGAAGGGCCTGCAGTGG 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGGAGAGCTGGACTGTCCCTTGGGGGAGGACGAGGAGCACTGTGTCAAGAGCTTCCCCGAAGGGCCTGCAGTGG 592
Query 308 CAGTCCGCCTCTCCAAGGACCGATCCACACTGCAGGTGCTGGACTCGGCCACAGGGAACTGGTTCTCTGCCTGT 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGTCCGCCTCTCCAAGGACCGATCCACACTGCAGGTGCTGGACTCGGCCACAGGGAACTGGTTCTCTGCCTGT 666
Query 382 TTCGACAACTTCACAGAAGCTCTCGCTGAGACAGCCTGTAGGCAGATGGGCTACAGCAGCAAACCCACTTTCAG 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCGACAACTTCACAGAAGCTCTCGCTGAGACAGCCTGTAGGCAGATGGGCTACAGCAGCAAACCCACTTTCAG 740
Query 456 AGCTGTGGAGATTGGCCCAGACCAGGATCTGGATGTTGTTGAAATCACAGAAAACAGCCAGGAGCTTCGCATGC 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCTGTGGAGATTGGCCCAGACCAGGATCTGGATGTTGTTGAAATCACAGAAAACAGCCAGGAGCTTCGCATGC 814
Query 530 GGAACTCAAGTGGGCCCTGTCTCTCAGGCTCCCTGGTCTCCCTGCACTGTCTTGCCTGTGGGAAGAGCCTGAAG 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGAACTCAAGTGGGCCCTGTCTCTCAGGCTCCCTGGTCTCCCTGCACTGTCTTGCCTGTGGGAAGAGCCTGAAG 888
Query 604 ACCCCCCGTGTGGTGGGTGGGGAGGAGGCCTCTGTGGATTCTTGGCCTTGGCAGGTCAGCATCCAGTACGACAA 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACCCCCCGTGTGGTGGGTGGGGAGGAGGCCTCTGTGGATTCTTGGCCTTGGCAGGTCAGCATCCAGTACGACAA 962
Query 678 ACAGCACGTCTGTGGAGGGAGCATCCTGGACCCCCACTGGGTCCTCACGGCAGCCCACTGCTTCAGGAAACATA 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACAGCACGTCTGTGGAGGGAGCATCCTGGACCCCCACTGGGTCCTCACGGCAGCCCACTGCTTCAGGAAACATA 1036
Query 752 CCGATGTGTTCAACTGGAAGGTGCGGGCAGGCTCAGACAAACTGGGCAGCTTCCCATCCCTGGCTGTGGCCAAG 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCGATGTGTTCAACTGGAAGGTGCGGGCAGGCTCAGACAAACTGGGCAGCTTCCCATCCCTGGCTGTGGCCAAG 1110
Query 826 ATCATCATCATTGAATTCAACCCCATGTACCCCAAAGACAATGACATCGCCCTCATGAAGCTGCAGTTCCCACT 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATCATCATCATTGAATTCAACCCCATGTACCCCAAAGACAATGACATCGCCCTCATGAAGCTGCAGTTCCCACT 1184
Query 900 CACTTTCTCAGGCACAGTCAGGCCCATCTGTCTGCCCTTCTTTGATGAGGAGCTCACTCCAGCCACCCCACTCT 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CACTTTCTCAGGCACAGTCAGGCCCATCTGTCTGCCCTTCTTTGATGAGGAGCTCACTCCAGCCACCCCACTCT 1258
Query 974 GGATCATTGGATGGGGCTTTACGAAGCAGAATGGAGGGAAGATGTCTGACATACTGCTGCAGGCGTCAGTCCAG 1047
||||||||||||||||||||||||||||||||||
Sbjct 1259 GGATCATTGGATGGGGCTTTACGAAGCAGAATGG---------------------------------------- 1292
Query 1048 GTCATTGACAGCACACGGTGCAATGCAGACGATGCGTACCAGGGGGAAGTCACCGAGAAGATGATGTGTGCAGG 1121
Sbjct 1293 -------------------------------------------------------------------------- 1292
Query 1122 CATCCCGGAAGGGGGTGTGGACACCTGCCAGGGTGACAGTGGTGGGCCCCTGATGTACCAATCTGACCAGTGGC 1195
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1293 -----------------------------AGGGTGACAGTGGTGGGCCCCTGATGTACCAATCTGACCAGTGGC 1337
Query 1196 ATGTGGTGGGCATCGTTAGCTGGGGCTATGGCTGCGGGGGCCCGAGCACCCCAGGAGTATACACCAAGGTCTCA 1269
|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1338 ATGTGGTGGGCATCGTTAGTTGGGGCTATGGCTGCGGGGGCCCGAGCACCCCAGGAGTATACACCAAGGTCTCA 1411
Query 1270 GCCTATCTCAACTGGATCTACAATGTCTGGAAGGCTGAGCTG-------------------------------- 1311
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1412 GCCTATCTCAACTGGATCTACAATGTCTGGAAGGCTGAGCTGTAATGCTGCTGCCCCTTTGCAGTGCTGGGAGC 1485
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1486 CGCTTCCTTCCTGCCCTGCCCACCTGGGGATCCCCCAAAGTCAGACACAGAGCAAGAGTCCCCTTGGGTACACC 1559
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1560 CCTCTGCCCACAGCCTCAGCATTTCTTGGAGCAGCAAAGGGCCTCAATTCCTATAAGAGACCCTCGCAGCCCAG 1633
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1634 AGGCGCCCAGAGGAAGTCAGCAGCCCTAGCTCGGCCACACTTGGTGCTCCCAGCATCCCAGGGAGAGACACAGC 1707
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1708 CCACTGAACAAGGTCTCAGGGGTATTGCTAAGCCAAGAAGGAACTTTCCCACACTACTGAATGGAAGCAGGCTG 1781
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1782 TCTTGTAAAAGCCCAGATCACTGTGGGCTGGAGAGGAGAAGGAAAGGGTCTGCGCCAGCCCTGTCCGTCTTCAC 1855
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1856 CCATCCCCAAGCCTACTAGAGCAAGAAACCAGTTGTAATATAAAATGCACTGCCCTACTGTTGGTATGACTACC 1929
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 1930 GTTACCTACTGTTGTCATTGTTATTACAGCTATGGCCACTATTATTAAAGAGCTGTGTAACATCTCTGGCATAG 2003
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2004 GCTAGCTGGAATGCTTGATAAGAACTGAGCTGGGATGATTGAACTTTCATTCTTTGGCTTGGGGAGAAAAGAAG 2077
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2078 TCCTGGGGAAGCAATTGAGTCTCAAAGTAGAGGCAGGGGAAAAAAGAGTTAGGGAGACCAGATCTGCTGAGTGG 2151
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2152 CAGCAAGAGTGAGCTGCAGATTACAGAAACCAGGGTGAGCAAGTTTGAGTCCCACACAGGGCCTTCTCCCTTTG 2225
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2226 CCTCTTTCCCTCCCTCCCTGCCTGTGATAATCAGCCAGGAGCCAGGGATAACCTATGACTTGGGAAAGAGATGA 2299
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2300 GTTAGGCAGTCAAGGGTGACATTCAATCAGGGATCCACAAGTGGCTGGAAAGAAATGCTGGTCCTGTGTCCTAA 2373
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2374 CTTTTTCCGCCTGGAGAGCCCTCAGTGTGGCTTCTTACATTTAAAAAACAAAAAGGATCAGCTGCCAGGTGTGA 2447
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2448 GGCAGTCCCCAAGCTGAGTTGTGAGGATGTAAGCATGAATAAGTCCCTGCACTCAAAATGGTCAAAGAATTAAA 2521
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2522 CCCCATGGACTTTTTTGGCATCTGTATGAAAGCTTGGGTTTTCTGAGGACTGTCTTGCTATAGTTAAGTCAGAT 2595
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2596 CCTAGATGAAATATACTTGTTCATACTGTACTAGGTTCTTAGGAAACAACAGAATTCCTCAAATGCCAAAAACA 2669
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2670 AAGAAAATAGAAACCCAGAAAACAAAACAAAATAAAACAAAACCATCAGAACTGTGAGTGGAAACTAAGGTGAT 2743
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2744 GATCTGGGAGCAATACACTAAAATCTTGGGTCGAGACCTATATGAAGGCTGGCAGTGGAGCTAAACCTGGACAC 2817
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2818 ACTGAAGACAAGGGAGCTGAACCAGGGCTCCTACATGAAGCAGGGATAACTGATGGCAGTAAATGTGGTCTCAA 2891
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2892 ATTGCAGATGGTCTGGAGGAAAATTTCCCAAATTTAGAGCCTCAGGATTCCCAAAGATCCTCCAAATATGAGCT 2965
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 2966 CACAATCAAAGATCAGAGACGTTGAAAAATAAAAAACACCTTAAGTGGGCAGCATAAAAAACAGCTAATTTAGA 3039
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3040 ACCCCAAAGGCTTCAGATGTCAGAATATTAGAGACTTATGATAATAAGCAATATTTGCAGAGTATTTGTATGTG 3113
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3114 CCAGACACTATTGTAAGTGCTTCATCATGTACTGATTCATTTAATACTCACAGAAATCTGTGAGATGGGTATTA 3187
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3188 TTCTTATCCTCACTCTATGGATTAAAAAAACTAAGGCACAAAGTGGTTAAGCTCCTTGCCTGAGATTATAGACT 3261
Query 1312 -------------------------------------------------------------------------- 1311
Sbjct 3262 GTAAGTTGAACGTGAGCACTTGGAATACAGAGTTCATGCTGTAAACTACCACACTATAGGGCCTCCAATATGAT 3335
Query 1312 ----------------------------------------------------------------- 1311
Sbjct 3336 AATTTATAAAATATTTGAATAAAAAATGAATACTAGTTCCACATTTTAAAAAAAAAAAAAAAAAA 3400
